BS30164.complete Sequence
983 bp assembled on 2012-08-22
GenBank Submission: KX804922
> BS30164.complete
GAAGTTATCAGTCGACATGAAGATATGGAGGCTGTTCTCCCAGCTGATCG
TTTCGCTGGCATGTGTTTTTGGCCAGCAGCCGGATATGGATGTTGTGGGA
TCTTGCTCTAGATACAAGAAGAGCGTTTTCGAGGAAAGAATCGAGTTCGG
TTTCCTGTTGCCCGGAGCTTCGATTGAGAGTCGGATCATAGACAACTGCA
GGAGCTACACGCCGCTCATCGTCGGTGGTCATCCGGCCCAGCCCAGGGAA
TTTCCGCATATGGCCCGCTTGGGGCGTCGCCCAGATCCGAGCAGCCGTGC
CGACTGGTTTTGTGGTGGCGTTCTGATCAGCGAGCGGTTCGTCTTAACCG
CAGCTCACTGCCTGGAATCGGAAAGGGGAGAGGTGAATGTTGTGCGATTG
GGCGAACTCGACTTCGATTCCTTGGATGAGGATGCGGCGCCCAGAGACTA
TATGGTTGCAGGGTATATAGCCCATCCGGGCTACGAAGATCCGCAGTTCT
ACCATGATATAGGTCTTGTCAAACTGACGGAGGCCGTGGTCTTTGACCTA
TATAAGCATCCAGCCTGTCTGCCGTTCCAGGATGAACGCTCTTCCGACTC
CTTCATAGCCGTTGGGTGGGGAAGCACTGGCCTGGCGCTGAAGCCATCCG
CCCAGCTGCTGAAGGTGAAGTTGCAGCGCTACGGAAATTGGGTGTGCAAG
AAACTGCTTACCCGGCAGGTGGAGGAGTTCCCTCGAGGATTCGATGGAAA
CAACCAGCTCTGTGTTGGTTCGGAGATGGCCCAGGACACCTGTAACGGCG
ACTCAGGAGGACCTTTGCTAATGTACCATCGGGAATATCCCTGTATGTAC
GTAGTTGTGGGAATCACGTCGGCCGGTTTGTCCTGTGGGTCACCAGGAAT
ACCCGGAATCTACACTCGCGTCTATCCTTATTTAGGCTGGATAGCCCGAA
CTTTGGCCACGTTTTAAAAGCTTTCTAGACCAT
BS30164.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:28:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11843-RB | 951 | CG11843-PB | 1..951 | 17..967 | 4755 | 100 | Plus |
| CG11843-RA | 951 | CG11843-PA | 1..951 | 17..967 | 4755 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:28:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11843-RB | 1223 | CG11843-RB | 202..1153 | 17..968 | 4760 | 100 | Plus |
| CG11843-RA | 1048 | CG11843-RA | 27..978 | 17..968 | 4760 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:28:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29055099..29055418 | 374..693 | 1600 | 100 | Plus |
| 3R | 32079331 | 3R | 29055490..29055767 | 691..968 | 1390 | 100 | Plus |
| 3R | 32079331 | 3R | 29054773..29055047 | 102..376 | 1375 | 100 | Plus |
| 3R | 32079331 | 3R | 29054548..29054632 | 17..101 | 425 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:28:14 has no hits.
BS30164.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:26:29 Download gff for
BS30164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11843-RA | 27..975 | 17..965 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:37 Download gff for
BS30164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11843-RA | 27..975 | 17..965 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:04:55 Download gff for
BS30164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11843-RA | 27..975 | 17..965 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:04:55 Download gff for
BS30164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29054548..29054632 | 17..101 | 100 | -> | Plus |
| 3R | 29054773..29055046 | 102..375 | 100 | -> | Plus |
| 3R | 29055101..29055416 | 376..691 | 100 | -> | Plus |
| 3R | 29055491..29055764 | 692..965 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:37 Download gff for
BS30164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24880270..24880354 | 17..101 | 100 | -> | Plus |
| arm_3R | 24880495..24880768 | 102..375 | 100 | -> | Plus |
| arm_3R | 24880823..24881138 | 376..691 | 100 | -> | Plus |
| arm_3R | 24881213..24881486 | 692..965 | 100 | | Plus |
BS30164.pep Sequence
Translation from 16 to 966
> BS30164.pep
MKIWRLFSQLIVSLACVFGQQPDMDVVGSCSRYKKSVFEERIEFGFLLPG
ASIESRIIDNCRSYTPLIVGGHPAQPREFPHMARLGRRPDPSSRADWFCG
GVLISERFVLTAAHCLESERGEVNVVRLGELDFDSLDEDAAPRDYMVAGY
IAHPGYEDPQFYHDIGLVKLTEAVVFDLYKHPACLPFQDERSSDSFIAVG
WGSTGLALKPSAQLLKVKLQRYGNWVCKKLLTRQVEEFPRGFDGNNQLCV
GSEMAQDTCNGDSGGPLLMYHREYPCMYVVVGITSAGLSCGSPGIPGIYT
RVYPYLGWIARTLATF*
BS30164.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:24:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11843-PB | 316 | CG11843-PB | 1..316 | 1..316 | 1701 | 100 | Plus |
| CG11843-PA | 316 | CG11843-PA | 1..316 | 1..316 | 1701 | 100 | Plus |
| CG11842-PA | 319 | CG11842-PA | 8..317 | 2..314 | 814 | 50 | Plus |
| CG11841-PA | 319 | CG11841-PA | 16..315 | 12..314 | 811 | 51.5 | Plus |
| CG4927-PC | 362 | CG4927-PC | 93..355 | 55..309 | 523 | 43.5 | Plus |
