BS30173.complete Sequence
956 bp assembled on 2012-08-22
GenBank Submission: KX804515
> BS30173.complete
GAAGTTATCAGTCGACATGGGCGATGAAGGCGGTGGCGGTGGTCATGGCA
AGGGAGACCTTAAGTCTTTCCTCATGGACTTCATGATGGGCGGCGTTTCA
GCTGCCATAGCCAAGACGGCAGTGGCTCCTATCGAGCGCGTGAAGCTCAT
TCTGCAGGTGCAGGAGGTTTCCAAGCAGATCGCGGCAGATCAGCGCTACA
AGGGCATAGTCGATTGCTTCATTCGCATTCCCAAGGAGCAGGGCTTCTCG
TCGTTCTGGCGCGGCAACTTGGCCAACGTAATCCGATACTTCCCAACTCA
AGCCCTTAACTTTGCCTTCAAGGATGTGTACAAATCGGTATTCCTCGGGG
GCGTGGACAAGCACAAGCAGTTCTGGCGCCACTTTGCAGGAAATTTGGCC
TCTGGCGGTGCAGCAGGTGCCACATCTCTGTGCTTCGTTTATCCACTGGA
CTTTGCCAGAACCCGTTTGGCCGCCGATGTGGGCAAGGGCGGCAATCGGG
AGTTCAACGGCCTGATCGATTGTCTAATGAAGGTGATCAAGAGTGACGGA
CCCATCGGTCTGTACCGTGGATTCATCGTGTCGGTGCAGGGCATCGTCAT
CTACCGAGCAGCATACTTTGGATTCTATGACACTTGCCGCGACTTTCTGC
CGAATCCGAAGAGCACACCGTTCTATGTGAGCTGGGCGATTGCCCAGGTG
GTCACAACCGTTGCCGGTATTGCCTCCTATCCCTTCGATACTGTGCGTCG
CCGCATGATGATGCAGTCTGGCCTGAAGAAGTCCGAGATGGTGTACAAGA
ACACAGCCCATTGCTGGCTGGTGATTGCCAAGCAGGAGGGCATTGGAGCC
TTTTTCAAGGGCGCCCTATCGAACATAATTCGCGGCACGGGCGGTGCTCT
GGTTCTCGCCCTTTACGACGAGATGAAGAAGTACTTTTAGAAGCTTTCTA
GACCAT
BS30173.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:28:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ant2-RC | 924 | CG1683-PC | 1..924 | 17..940 | 4590 | 99.8 | Plus |
| Ant2-RB | 924 | CG1683-PB | 1..924 | 17..940 | 4590 | 99.8 | Plus |
| Ant2-RA | 924 | CG1683-PA | 1..924 | 17..940 | 4590 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:28:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ant2-RC | 1266 | CG1683-RC | 74..999 | 15..940 | 4600 | 99.8 | Plus |
| Ant2-RB | 1302 | CG1683-RB | 110..1035 | 15..940 | 4600 | 99.8 | Plus |
| Ant2-RA | 1335 | CG1683-RA | 143..1068 | 15..940 | 4600 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:28:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10779221..10779696 | 940..465 | 2380 | 100 | Minus |
| X | 23542271 | X | 10780195..10780519 | 339..15 | 1610 | 99.7 | Minus |
| X | 23542271 | X | 10779993..10780121 | 465..337 | 630 | 99.2 | Minus |
| X | 23542271 | X | 10781685..10782000 | 876..561 | 500 | 77.2 | Minus |
| X | 23542271 | X | 10782393..10782606 | 324..111 | 455 | 80.8 | Minus |
| X | 23542271 | X | 10782181..10782301 | 457..337 | 275 | 81.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:28:46 has no hits.
BS30173.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:26:32 Download gff for
BS30173.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ant2-RB | 85..1008 | 17..940 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:49 Download gff for
BS30173.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ant2-RA | 145..1068 | 17..940 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:05:08 Download gff for
BS30173.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ant2-RA | 145..1068 | 17..940 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:05:08 Download gff for
BS30173.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10779993..10780120 | 338..465 | 99 | <- | Minus |
| X | 10779221..10779695 | 466..940 | 100 | <- | Minus |
| X | 10780197..10780517 | 17..337 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:49 Download gff for
BS30173.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10673254..10673728 | 466..940 | 100 | <- | Minus |
| arm_X | 10674026..10674153 | 338..465 | 99 | <- | Minus |
| arm_X | 10674230..10674550 | 17..337 | 99 | | Minus |
BS30173.pep Sequence
Translation from 16 to 939
> BS30173.pep
MGDEGGGGGHGKGDLKSFLMDFMMGGVSAAIAKTAVAPIERVKLILQVQE
VSKQIAADQRYKGIVDCFIRIPKEQGFSSFWRGNLANVIRYFPTQALNFA
FKDVYKSVFLGGVDKHKQFWRHFAGNLASGGAAGATSLCFVYPLDFARTR
LAADVGKGGNREFNGLIDCLMKVIKSDGPIGLYRGFIVSVQGIVIYRAAY
FGFYDTCRDFLPNPKSTPFYVSWAIAQVVTTVAGIASYPFDTVRRRMMMQ
SGLKKSEMVYKNTAHCWLVIAKQEGIGAFFKGALSNIIRGTGGALVLALY
DEMKKYF*
BS30173.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:24:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ant2-PC | 307 | CG1683-PC | 1..307 | 1..307 | 1607 | 100 | Plus |
| Ant2-PB | 307 | CG1683-PB | 1..307 | 1..307 | 1607 | 100 | Plus |
| Ant2-PA | 307 | CG1683-PA | 1..307 | 1..307 | 1607 | 100 | Plus |
| sesB-PE | 299 | CG16944-PE | 6..297 | 14..305 | 1261 | 80.5 | Plus |
| sesB-PB | 299 | CG16944-PB | 6..297 | 14..305 | 1261 | 80.5 | Plus |
