BS30187.complete Sequence
2933 bp assembled on 2012-09-28
GenBank Submission: KX803326
> BS30187.complete
GAAGTTATCAGTCGACATGAGCAGCAACAACAACGCACCCGCATCGGCTC
CAGACACGGGCTCCACCAATGCCAACGATCCCATCTCCGGTTCGCTGTCC
GTAGACAGCAACCTGGTTATCATTCAGGACATGATTGATCTCTCGGCCAA
CCATCTGGAGGGCCTGCGAACGCAGTGCGCGATCAGCTCCACGCTGACGC
AGCAGGAGATTCGTTGCCTGGAGTCGAAGCTGGTGCGATACTTCTCCGAG
CTGCTGCTGGCGAAGATGCGGCTAAATGAGCGCATCCCGGCCAACGGGCT
TGTGCCCCACACAACGGGCAACGAACTGAGGCAATGGCTGCGCGTAGTGG
GCCTTAGCCAGGGGACTCTTACCGCCTGCCTTGCTCGCCTGACCACTCTA
GAGCAAAGCCTGCGTCTCAGCGACGAGGAGATCCGTCAACTCCTGGCTGA
CAGCCCCAGCCAGCGAGAGGAGGAGGAACTGCGACGCCTGACCAGGGCCA
TGCAGAACTTAAGGAAGTGCATGGAGTCGCTGGAGAGCGGTACTGCGGCT
AGCAACAACGATCCAGAGCAGTGGCACTGGGACTCCTGGGACAGGCCCAC
CCACATTCATCGCGGCAGTGTGGGAAACATTGGACTGGGTAACAATTCAA
CCGCCTCCCCGAGAACCCATCATCGCCAGCATGGTGTCAAGGGAAAGAAT
TCCGCTCTGGCCAACTCCACCAACTTCAAAAGTGGCCGCCAATCGCCCTC
AGCGACAGAAGAGCTGAACAGCACACAGGGTTCCCAGCTGACTTTAACCC
TTACGCCCTCGCCACCCAATTCGCCCTTCACGCCTTCCAGTGGGCTGAGC
AGCAGCCTTAATGGAACACCACAGAGGAGTCGTGGTACCCCGCCGCCAGC
TAGAAAGCACCAGACCTTGCTGAGCCAGAGTCATGTGCAAGTGGACGGGG
AGCAATTAGCCCGCAACCGTTTGCCCACTGATCCCAGCCCCGATAGCCAC
AGCTCCACCAGCTCGGACATCTTTGTGGACCCAAATACTAATGCCAGCTC
CGGAGGAAGTTCCTCGAACGTGCTTATGGTGCCATGCTCTCCGGGCGTGG
GTCACGTGGGCATGGGTCATGCAATCAAGCATCGTTTCACCAAGGCCCTG
GGCTTCATGGCCACCTGTACCCTGTGCCAGAAGCAGGTCTTTCACCGCTG
GATGAAGTGCACCGACTGCAAGTACATCTGCCACAAGTCATGCGCACCGC
ACGTACCGCCCTCCTGTGGACTTCCACGAGAATATGTGGACGAGTTTCGG
CACATAAAGGAGCAGGGAGGATACGCCAGTCTGCCGCATGTGCATGGCGC
GGCGAAAGGATCCCCTTTGGTAAAAAAGAGCACCCTGGGTAAGCCCTTGC
ATCAGCAGCACGGCGATAGCAGTTCGCCGAGTTCCAGCTGCACTAGTTCC
ACGCCCAGCAGTCCGGCGCTGTTCCAGCAAAGGGAGCGCGAGCTGGATCA
GGCGGGCAGCAGCTCTAGCGCCAATCTGTTACCTACGCCTTCGCTTGGCA
AGCACCAGCCGAGTCAATTCAACTTTCCCAACGTGACGGTGACGAGCAGT
GGCGGAAGCGGTGGTGTATCGCTCATCTCCAATGAACCAGTGCCAGAGCA
ATTCCCCACGGCGCCTGCAACAGCCAACGGAGGACTTGATAGTCTGGTGA
GCAGCTCCAACGGGCACATGAGCTCGCTCATCGGTAGCCAAACTTCAAAC
GCTTCTACTGCGGCCACCTTGACGGGCAGTCTGGTCAATAGCACAACCAC
CACCAGCACCTGCAGTTTCTTTCCGCGAAAATTGAGCACAGCCGGTGTGG
ATAAGAGGACGCCGTTCACCAGCGAGTACACGGATACCCACAAGTCAAAT
GACAGCGACAAGACAGTCTCCTTGTCTGGAAGTGCCAGCACGGACTCGGA
CCGGACACCCGTTCGTGTGGATTCAACGGAAGACGGAGACTCGGGACAAT
GGCGCCAGAACTCGATCTCACTCAAGGAATGGGACATCCCGTATGGTGAT
CTGCTTCTGCTCGAGCGGATAGGGCAGGGACGCTTCGGCACCGTGCATCG
AGCCCTTTGGCACGGAGATGTGGCGGTTAAGCTGCTCAACGAGGACTATC
TGCAAGACGAACACATGCTGGAGACGTTTCGCAGCGAGGTAGCCAACTTC
AAGAACACTCGACACGAGAACCTGGTGCTGTTCATGGGAGCCTGCATGAA
CCCACCATATTTGGCCATTGTGACTTCATTGTGCAAGGGCAACACCTTGT
ATACGTATATTCACCAGCGTCGGGAGAAGTTTGCCATGAACCGGACTCTC
CTCATTGCCCAGCAGATCGCCCAGGGCATGGGCTACCTGCACGCAAGGGA
GATCATCCACAAAGATCTGCGCACCAAGAACATCTTCATCGAGAACGGCA
AGGTGATTATCACGGACTTTGGGCTGTTCAGCTCCACCAAGCTGCTCTAC
TGTGATATGGGCCTAGGAGTGCCCCACAACTGGTTGTGCTACCTGGCGCC
GGAGCTAATCCGAGCATTGCAGCCGGAGAAGCCGCGTGGAGAGTGTCTGG
AGTTCACCCCATACTCCGATGTCTACTCTTTCGGAACCGTTTGGTACGAG
CTAATCTGCGGCGAGTTCACATTCAAGGATCAGCCGGCGGAATCGATCAT
CTGGCAGGTTGGCCGTGGGATGAAGCAGTCGCTGGCCAACCTGCAGTCTG
GACGGGATGTCAAGGACTTGCTGATGCTGTGCTGGACCTACGAGAAGGAG
CACCGGCCGCAGTTCGCACGCCTGCTCTCCCTGCTGGAGCATCTTCCCAA
GAAGCGTCTGGCGCGCAGTCCCTCCCACCCCGTCAACCTTTCCCGTTCCG
CCGAGTCCGTGTTCTGAAAGCTTTCTAGACCAT
BS30187.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:23:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ksr-RD | 2901 | CG2899-PD | 1..2901 | 17..2917 | 14505 | 100 | Plus |
| ksr-RC | 2901 | CG2899-PC | 1..2901 | 17..2917 | 14505 | 100 | Plus |
| ksr-RB | 2901 | CG2899-PB | 1..2901 | 17..2917 | 14505 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:23:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ksr-RD | 3354 | CG2899-RD | 270..3170 | 17..2917 | 14505 | 100 | Plus |
| ksr-RC | 5517 | CG2899-RC | 270..3170 | 17..2917 | 14505 | 100 | Plus |
| ksr-RB | 4559 | CG2899-RB | 270..3170 | 17..2917 | 14505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:23:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5480737..5483637 | 2917..17 | 14505 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:23:04 has no hits.
BS30187.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-28 18:20:32 Download gff for
BS30187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ksr-RA | 249..3148 | 17..2916 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:17 Download gff for
BS30187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ksr-RA | 270..3169 | 17..2916 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:03:02 Download gff for
BS30187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ksr-RB | 270..3169 | 17..2916 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:03:02 Download gff for
BS30187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5480738..5483637 | 17..2916 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:17 Download gff for
BS30187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1306460..1309359 | 17..2916 | 100 | | Minus |
BS30187.pep Sequence
Translation from 16 to 2916
> BS30187.pep
MSSNNNAPASAPDTGSTNANDPISGSLSVDSNLVIIQDMIDLSANHLEGL
RTQCAISSTLTQQEIRCLESKLVRYFSELLLAKMRLNERIPANGLVPHTT
GNELRQWLRVVGLSQGTLTACLARLTTLEQSLRLSDEEIRQLLADSPSQR
EEEELRRLTRAMQNLRKCMESLESGTAASNNDPEQWHWDSWDRPTHIHRG
SVGNIGLGNNSTASPRTHHRQHGVKGKNSALANSTNFKSGRQSPSATEEL
NSTQGSQLTLTLTPSPPNSPFTPSSGLSSSLNGTPQRSRGTPPPARKHQT
LLSQSHVQVDGEQLARNRLPTDPSPDSHSSTSSDIFVDPNTNASSGGSSS
NVLMVPCSPGVGHVGMGHAIKHRFTKALGFMATCTLCQKQVFHRWMKCTD
CKYICHKSCAPHVPPSCGLPREYVDEFRHIKEQGGYASLPHVHGAAKGSP
LVKKSTLGKPLHQQHGDSSSPSSSCTSSTPSSPALFQQRERELDQAGSSS
SANLLPTPSLGKHQPSQFNFPNVTVTSSGGSGGVSLISNEPVPEQFPTAP
ATANGGLDSLVSSSNGHMSSLIGSQTSNASTAATLTGSLVNSTTTTSTCS
FFPRKLSTAGVDKRTPFTSEYTDTHKSNDSDKTVSLSGSASTDSDRTPVR
VDSTEDGDSGQWRQNSISLKEWDIPYGDLLLLERIGQGRFGTVHRALWHG
DVAVKLLNEDYLQDEHMLETFRSEVANFKNTRHENLVLFMGACMNPPYLA
IVTSLCKGNTLYTYIHQRREKFAMNRTLLIAQQIAQGMGYLHAREIIHKD
LRTKNIFIENGKVIITDFGLFSSTKLLYCDMGLGVPHNWLCYLAPELIRA
LQPEKPRGECLEFTPYSDVYSFGTVWYELICGEFTFKDQPAESIIWQVGR
GMKQSLANLQSGRDVKDLLMLCWTYEKEHRPQFARLLSLLEHLPKKRLAR
SPSHPVNLSRSAESVF*
BS30187.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:52:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ksr-PD | 966 | CG2899-PD | 1..966 | 1..966 | 5077 | 100 | Plus |
| ksr-PC | 966 | CG2899-PC | 1..966 | 1..966 | 5077 | 100 | Plus |
| ksr-PB | 966 | CG2899-PB | 1..966 | 1..966 | 5077 | 100 | Plus |
| ksr-PA | 966 | CG2899-PA | 1..966 | 1..966 | 5077 | 100 | Plus |
| phl-PE | 739 | CG2845-PE | 376..708 | 625..961 | 483 | 37.3 | Plus |
