BS30308.complete Sequence
1208 bp assembled on 2012-06-01
GenBank Submission: KX800446
> BS30308.complete
GAAGTTATCAGTCGACATGGTGACTAAATGGCCGAACACACTCGCTCAAA
CAACCCTCGAATTGGCCCTCAGGGGTGTGGAAGTGGCAAACCAACCCCCA
GAACAGAGTCTCGAGGTATATAAGAACCGGGTGAGGGCGCAGCAGCCAGA
CAGTTTCGCACAGTCAGCGATCGTGTTCAGTAGCTCATCTCGAGATCAGT
TGGAAAACGAAATACCCCAGAAACCCAAGATGTCGCGTTCATTTTTGATG
GATTCCCTACTCAGCGATAGGCCCAATTTGAGCCAGAAGAAGGAGAAACT
GGGATCGCCAGGAGGAAGTCCTACAGCCGCTGCTGCAGTGGCCGCAGCTG
CCATGTTACCATCGATACCCATGCTTCCTTACCCGGCCAGCTATGTGGGC
AGCTATCTCTTCTCCTTGGGCATCCAGCAGCAGCAGCAACAACAGCAGCA
GCAGCAACAGCACGCAGCAGCTGCAGCAGCGGCCGCAGCAGCAGCAGCTG
CCTTGCAGCAACATCCACATGTCAGTTCGAGTCCCGGTTCCCTTTACCAT
CCATACGCCCAGCTGTTCGCCAGCAAGAGGAAGTCCAGTGGATTCAGCAA
CTACGAAGGATGTTATCCATCGCCACCGCTCTCGGCCAATCCCAACTCCC
AGCAATTGCCGCCAATACACAACCTCTACGGATCTCCAGTTGTGGGCGGA
TTACCCTTACCGGAACCTGGAAGCTTCTGCACATCACCGTCCGCTTCATC
GTCCGCCTCTTTGGATTATACCAATAACTTTGATGAACCTCAAGGAAAGC
GTTTCAAGCACGAGTCCTCCTGCTCTCCGAATAGCTCACCACTGAAGAAC
CACTCTTCGGGAGGTCCCGTCGAGATCACGCCGCTGATCAACGATTATGC
CGATTCCAGCAAAAGGATCCGCACTGCCTTCACCAGCACCCAGTTGCTGG
AGCTCGAGCGAGAATTCTCGCACAACGCCTACCTATCCCGCCTACGTCGC
ATCGAAATCGCCAATAGATTGCGCCTTTCCGAGAAGCAGGTGAAGATCTG
GTTCCAGAATCGCCGAGTCAAGCAGAAAAAGGGCGGCTCCGAAAGTCCCA
CCTTCAATCTGTCCACCAACTCCAATGGAAGTCCGCAAGCATCTCCAGTG
TCTCCCCAAGTCAAAGTCCACGAATTGAAGGTGGAGGCGTAGAAGCTTTC
TAGACCAT
BS30308.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:32:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ind-RB | 963 | CG11551-PB | 1..963 | 230..1192 | 4800 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:32:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ind-RB | 1126 | CG11551-RB | 1..1025 | 170..1194 | 5110 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:32:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15042900..15044077 | 1194..17 | 5875 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:32:19 has no hits.
BS30308.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-01 15:19:17 Download gff for
BS30308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ind-RA | 1..1176 | 17..1192 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:17 Download gff for
BS30308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ind-RB | 1..1023 | 170..1192 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:46:07 Download gff for
BS30308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ind-RB | 1..1023 | 170..1192 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:46:07 Download gff for
BS30308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15042902..15044077 | 17..1192 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:17 Download gff for
BS30308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15036002..15037177 | 17..1192 | 99 | | Minus |
BS30308.pep Sequence
Translation from 16 to 1191
> BS30308.pep
MVTKWPNTLAQTTLELALRGVEVANQPPEQSLEVYKNRVRAQQPDSFAQS
AIVFSSSSRDQLENEIPQKPKMSRSFLMDSLLSDRPNLSQKKEKLGSPGG
SPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSLGIQQQQQQQQQQQQHA
AAAAAAAAAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCY
PSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLD
YTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKR
IRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRR
VKQKKGGSESPTFNLSTNSNGSPQASPVSPQVKVHELKVEA*
BS30308.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ind-PB | 320 | CG11551-PB | 1..320 | 72..391 | 1645 | 100 | Plus |
| Antp-PK | 361 | CG1028-PK | 89..361 | 123..381 | 228 | 32.3 | Plus |
| Antp-PG | 361 | CG1028-PG | 89..361 | 123..381 | 228 | 32.3 | Plus |
| Antp-PF | 365 | CG1028-PF | 89..365 | 123..381 | 226 | 31.9 | Plus |
| Antp-PE | 365 | CG1028-PE | 89..365 | 123..381 | 226 | 31.9 | Plus |
