BS30316.complete Sequence
968 bp assembled on 2012-06-11
GenBank Submission: KX805552
> BS30316.complete
GAAGTTATCAGTCGACATGGACTTCTTTGCGACGGGTGGATTCCAGCAGC
TTTACAGCGACTTGGAAGAGGAGCCACTGGCCGGCGGCGATGCGCTGCTA
AATATAGTCAGTGTTGGGGAATTCGATAGCACCTATGTGGATACTAGCTT
TTCCGGTGGCAACTATAATCAGCTGGAATTCGAGGAGTCGGATTATTATG
GCATCATCACATTGGACAGTAATAATAATACAAATACTAATGGGAATATC
CAGGTGGGTCTGCCCCACGTGGAGGATCCTTCATTGTTCATCGACTTCAA
TGACCTGACCGTATGTCCGCCGGACTTAAGTGATTGGGAGCAGCGACTGC
TGGATAACTACGTAGAGATTCCGGACCTGGTGGACTTTCTGCCGGAACGA
ACTCCCCTGTGCACGGATAACTGTGCGGACTTTCTGGAGGAGAGCAACAG
CAATCTGCGGCTGTCGGGGCCACCACATTCAGAGATTTTCGTTCCCGATC
GATCGTCTTCCTCGCCCGGCAGCAGTGATTCCGCCAGTCCAGCTGAAGCT
GTTGCCCCACCTTCTGCCCTCCAGATGAGTGAAAATGCCGCCGGCGAACG
GGGTTACCTGTGCACCTTTGGCAATTGCGAAAAGATCTACGCCAAGCCCG
CGCATCTGAAGGCCCATTTGAGGCGGCATCTAGGCGAGAAGCCCTACGTC
TGCAGTTGGCCAGATTGCGTCTGGCGGTTCTCCCGATCCGATGAACTGGC
CCGCCACAAGCGCTCCCATTCCGGCGTGAAGCCGTACAAATGTGACTACT
GTTCCAAGTGCTTCGCCAGGTCGGATCACCTCACCAAGCATCGTAAGGTG
CACGAAAGACGTCTTCTGGCCGCCTCCAGAGCTGGCAGATCCCTGATCTC
CGACGATCTGTATGCCGTGCGACCAGGTCGAAAGCGAAAGAATCAGTTAT
AGAAGCTTTCTAGACCAT
BS30316.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:34:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bteb2-RA | 936 | CG2932-PA | 1..934 | 17..950 | 4670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:34:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bteb2-RA | 1032 | CG2932-RA | 71..1005 | 16..950 | 4675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:34:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4770584..4771518 | 950..16 | 4675 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:34:36 has no hits.
BS30316.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-11 15:33:22 Download gff for
BS30316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bteb2-RA | 1..935 | 17..952 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:19 Download gff for
BS30316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bteb2-RA | 72..1006 | 17..952 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:47:02 Download gff for
BS30316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bteb2-RA | 72..1006 | 17..952 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:47:02 Download gff for
BS30316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4770583..4771517 | 17..952 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:19 Download gff for
BS30316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4664616..4665550 | 17..952 | 99 | | Minus |
BS30316.pep Sequence
Translation from 16 to 951
> BS30316.pep
MDFFATGGFQQLYSDLEEEPLAGGDALLNIVSVGEFDSTYVDTSFSGGNY
NQLEFEESDYYGIITLDSNNNTNTNGNIQVGLPHVEDPSLFIDFNDLTVC
PPDLSDWEQRLLDNYVEIPDLVDFLPERTPLCTDNCADFLEESNSNLRLS
GPPHSEIFVPDRSSSSPGSSDSASPAEAVAPPSALQMSENAAGERGYLCT
FGNCEKIYAKPAHLKAHLRRHLGEKPYVCSWPDCVWRFSRSDELARHKRS
HSGVKPYKCDYCSKCFARSDHLTKHRKVHERRLLAASRAGRSLISDDLYA
VRPGRKRKNQL*
BS30316.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:04:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bteb2-PA | 311 | CG2932-PA | 1..311 | 1..311 | 1674 | 100 | Plus |
| luna-PC | 570 | CG33473-PC | 439..569 | 143..279 | 317 | 44.5 | Plus |
| luna-PD | 570 | CG33473-PD | 439..569 | 143..279 | 317 | 44.5 | Plus |
| luna-PB | 570 | CG33473-PB | 439..569 | 143..279 | 317 | 44.5 | Plus |
| CG42741-PA | 362 | CG9895-PA | 282..362 | 199..279 | 303 | 58 | Plus |
