BS30321.complete Sequence
887 bp assembled on 2012-06-01
GenBank Submission: KX804306
> BS30321.complete
GAAGTTATCAGTCGACATGATGATTTTGCGCTCGTGGGATCGCGTTAAAC
CTCGTTCCATTTCGGATTTCGCATGTTTCCTCCTGGTGGCTGTCTTTGTG
CCCGTGACATACATCTTCCATGTGACCATTGTTATGCCGGAACTGTTTGC
CATCGGAGGGATTTGGTACACGTTATTATGGTTGGCCAGCCTGTTCCTCA
TCTTCAACATCACATCCAACATGCTGGCCTGCATGCTTGTGGACACTAGT
ATCCGCAAGGAGCTGCTGAAGCCACCGTTGGATGCGGCGCAGCTGGCACG
GTGGCACTCTTGCCAGGATTGTCAGACATTGGTGCCACCTCGATCCTGGC
ACTGCGAAGTGTGCAACGTGTGCGTGCTGAAGCGGGACCACCACTGTCGG
TTCACTTGCTGCTGCATCGGGCATCACAACTACAGGTACTTCTTCTACTA
CCTGGTTTACATGATCATCGGATCCTTGGCGGCCGCCATCATGGAGAGCA
TCTATCTGTGGCATCTCCATCTGGACATCTACTGGCGCTGGTCTACGCTG
TTCACCATATTTGCTCCCGTGGTTAGCCTGATGCTGTCTCCAAGCTGGGA
GTCCTTCTACTTGGTCATATATGATCTCACCCTTCTGGGCTTCGCCATAT
CATCCTTGCTCCTTGTCTTCCACTGGTCGATATTCAAGAGCGGTTCGGTG
ACACGAGAGCGCGGCACAAGAAAGTACGATCGCGGTTTGCGGGGTAACCT
GGAGATGGTTCTGGGCAAGAGAATGCATCTCACCTGGCTGTCGCCGTTTC
TACGCAGCGATCTGCCACACGACGGAATGAACTGGGAACCCATAGCCGCC
TTTTCTCCAAAGGAGGAATAGAAGCTTTCTAGACCAT
BS30321.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:31:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4676-RA | 855 | CG4676-PA | 1..855 | 17..871 | 4275 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:31:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4676-RA | 1024 | CG4676-RA | 35..891 | 16..872 | 4285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:31:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13236308..13236922 | 258..872 | 3075 | 100 | Plus |
| 2R | 25286936 | 2R | 13236014..13236255 | 16..257 | 1210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:31:40 has no hits.
BS30321.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-01 15:19:10 Download gff for
BS30321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4676-RA | 154..1008 | 17..871 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:59 Download gff for
BS30321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4676-RA | 36..890 | 17..871 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:51 Download gff for
BS30321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4676-RA | 36..890 | 17..871 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:51 Download gff for
BS30321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13236015..13236255 | 17..257 | 100 | -> | Plus |
| 2R | 13236308..13236921 | 258..871 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:59 Download gff for
BS30321.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9123520..9123760 | 17..257 | 100 | -> | Plus |
| arm_2R | 9123813..9124426 | 258..871 | 100 | | Plus |
BS30321.pep Sequence
Translation from 16 to 870
> BS30321.pep
MMILRSWDRVKPRSISDFACFLLVAVFVPVTYIFHVTIVMPELFAIGGIW
YTLLWLASLFLIFNITSNMLACMLVDTSIRKELLKPPLDAAQLARWHSCQ
DCQTLVPPRSWHCEVCNVCVLKRDHHCRFTCCCIGHHNYRYFFYYLVYMI
IGSLAAAIMESIYLWHLHLDIYWRWSTLFTIFAPVVSLMLSPSWESFYLV
IYDLTLLGFAISSLLLVFHWSIFKSGSVTRERGTRKYDRGLRGNLEMVLG
KRMHLTWLSPFLRSDLPHDGMNWEPIAAFSPKEE*
BS30321.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4676-PA | 284 | CG4676-PA | 1..284 | 1..284 | 1552 | 100 | Plus |
| CG10344-PB | 278 | CG10344-PB | 9..270 | 12..273 | 696 | 44.9 | Plus |
| CG10344-PA | 198 | CG10344-PA | 9..191 | 12..194 | 496 | 44.1 | Plus |
| CG18810-PA | 300 | CG18810-PA | 1..283 | 2..275 | 446 | 35.2 | Plus |
| CG13029-PC | 288 | CG13029-PC | 31..280 | 26..274 | 425 | 37.8 | Plus |
