BS30323.complete Sequence
1094 bp assembled on 2012-06-01
GenBank Submission: KX802274
> BS30323.complete
GAAGTTATCAGTCGACATGTCATCCGTCATGCACTACTATCCAGTTCACC
AGGCTAAAGTCGGCTCCTATTCAGCAGATCCTTCCGAGGTTAAATACAGT
GATTTGATCTATGGTCATCATCACGATGTTAACCCCATCGGTCTGCCTCC
CAACTACAACCAGATGAACTCCAACCCCACCACCCTCAACGATCACTGCT
CCCCGCAGCATGTGCATCAGCAGCATGTGTCATCGGACGAGAATCTGCCA
TCTCAGCCCAACCACGACTCGCAGAGGGTGAAGCTTAAGCGATCACGGAC
TGCCTTCACCAGTGTCCAACTGGTGGAACTTGAGAACGAGTTCAAGAGCA
ACATGTACTTGTACAGGACGCGCAGGATTGAGATTGCTCAGCGCTTGTCC
CTGTGCGAACGCCAGGTGAAGATCTGGTTCCAGAACCGACGAATGAAGTT
CAAGAAGGACATACAAGGTCACCGCGAGCCCAAGTCCAACGCCAAGTTGG
CTCAACCCCAGGCTGAGCAGAGTGCCCACCGAGGCATAGTGAAGCGCCTC
ATGTCCTACTCCCAGGATCCCAGGGAGGGCACAGCGGCAGCAGAAAAGCG
TCCTATGATGGCAGTGGCTCCTGTGAATCCAAAGCCAGACTATCAAGCCA
GCCAGAAAATGAAGACCGAAGCATCAACCAACAACGGCATGTGCTCCAGC
GCCGACCTCAGCGAGATCTTGGAGCATCTGGCTCAAACTACAGCTGCACC
ACAGGTCAGCACTGCCACATCTAGCACAGGAACATCTACCAACTCGGCTT
CTAGCTCCTCTTCGGGCCACTATTCCTACAACGTGGATTTGGTTCTGCAG
AGCATCAAGCAGGATTTGGAGGCAGCGGCCCAGGCTTGGTCCAAGTCTAA
ATCCGCGCCTATCCTGGCCACTCAATCCTGGCATCCCAGTTCCCAAAGTC
AGGTCCCCACGAGCGTGCATGCGGCTCCCTCGATGAATCTGTCGTGGGGC
GAGCCTGCTGCCAAGTCGAGAAAGCTGAGCGTTAATCACATGAACCCGTG
CGTAACCTCCTACAATTATCCCAACTAAAAGCTTTCTAGACCAT
BS30323.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:32:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| zen-RA | 1062 | CG1046-PA | 1..1062 | 17..1078 | 5295 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:32:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| zen-RA | 1267 | CG1046-RA | 47..1108 | 17..1078 | 5295 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:32:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6753023..6753997 | 1078..104 | 4860 | 99.9 | Minus |
| 3R | 32079331 | 3R | 6754058..6754148 | 107..17 | 440 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:32:26 has no hits.
BS30323.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-01 15:19:18 Download gff for
BS30323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| zen-RB | 16..1075 | 17..1076 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:21 Download gff for
BS30323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| zen-RA | 47..1106 | 17..1076 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:46:11 Download gff for
BS30323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| zen-RA | 47..1106 | 17..1076 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:46:11 Download gff for
BS30323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6753025..6753997 | 104..1076 | 99 | <- | Minus |
| 3R | 6754062..6754148 | 17..103 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:21 Download gff for
BS30323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2578747..2579719 | 104..1076 | 99 | <- | Minus |
| arm_3R | 2579784..2579870 | 17..103 | 100 | | Minus |
BS30323.pep Sequence
Translation from 16 to 1077
> BS30323.pep
MSSVMHYYPVHQAKVGSYSADPSEVKYSDLIYGHHHDVNPIGLPPNYNQM
NSNPTTLNDHCSPQHVHQQHVSSDENLPSQPNHDSQRVKLKRSRTAFTSV
QLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQ
GHREPKSNAKLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAEKRPMMAV
APVNPKPDYQASQKMKTEASTNNGMCSSADLSEILEHLAQTTAAPQVSTA
TSSTGTSTNSASSSSSGHYSYNVDLVLQSIKQDLEAAAQAWSKSKSAPIL
ATQSWHPSSQSQVPTSVHAAPSMNLSWGEPAAKSRKLSVNHMNPCVTSYN
YPN*
BS30323.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| zen-PA | 353 | CG1046-PA | 1..353 | 1..353 | 1847 | 100 | Plus |
| zen2-PB | 232 | CG1048-PB | 10..80 | 75..147 | 230 | 67.1 | Plus |
| zen2-PA | 252 | CG1048-PA | 30..100 | 75..147 | 230 | 67.1 | Plus |
| exex-PA | 525 | CG8254-PA | 438..517 | 89..168 | 222 | 56.2 | Plus |
| ind-PB | 320 | CG11551-PB | 164..293 | 16..158 | 216 | 40.6 | Plus |
