BS30325.complete Sequence
1149 bp assembled on 2012-07-26
GenBank Submission: KX801100
> BS30325.complete
GAAGTTATCAGTCGACATGCCCCGGCCCTCGCGAGAATCCTACGGCGAAC
AGAAGCCCCCCTATTCGTACATTTCGCTAACGGCCATGGCCATCTGGAGT
TCGCCGGAGAAAATGTTGCCGCTCAGCGATATCTACAAGTTTATCACGGA
CCGATTTCCGTACTACCGCAAGAACACCCAGCGCTGGCAAAATTCGCTGA
GGCACAATCTCAGCTTCAACGATTGCTTCATCAAGGTGCCCCGACGGCCG
GATAGACCCGGCAAGGGAGCCTACTGGGCACTGCATCCGCAGGCCTTTGA
TATGTTCGAAAACGGCAGCCTGCTCCGGCGGAGGAAGCGCTTCAAGCTGC
ACAAGAACGACAAGGATCTGCTCAACGAGGAGCTGACTGCCCTGGCGAAC
CTCAATAGATTCTTCTTTACCACCCGTAACGGAGGCAGTGCAGCGCACAT
GTCGCCGCTGGATATGAACAATGCGGCCGCCATGAGACTGGATCCACTGC
CCAGGAGCACGGCGCACATGCCAAACTCCCTGGGTCCAGGTGTGCCACTG
CCGCACGTAATGCCCGCCTCCATGTCCGGTGCGGATCACACGAATCTGGC
GGACATGGGACTGACCAATCTGCCCGCGCTAACCAGTTCCGAGATCGAGG
GACCGCTGAGCCTGCGACCCAAGCGATCCTTCACGATAGAGAGCCTGATC
ACGCCCGACAAGCCGGAACATCCGTCGGAGGACGAGGACGACGAGGATGA
CCGCGTCGATATCGATGTGGTCGAGTGCAGCGGTATCAGCCGCTATCCCA
CAACGCCCGCCGCCTCCGAGGAGTATATGTCCGCCAGCCGATCGAGCCGA
ACGGAGGATCCCCTGCCGCCGATGCACACGATCAACGCCGGTGCCCACGT
GCCGTTTCTGCACTATGCCACGGGTGCCAATGTGGCCGGACTGCCAGCGT
CGGGAATACCCAATAGCCCCACCACCTACGAGCTGGCCATCTCGCATCCG
CTCTTCATGATGGCGGCGCCCATTGCCAACATGCACAACATATACTACAA
TAATGTTACCCTCGTCGCTCCGGCGCAGCAATATCGGAGCCCCGAGGTGC
AGAATAGAATAGACAACGATATGCGTACGATATAAGCTTTCTAGACCAT
BS30325.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:45:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fd96Ca-RB | 1119 | CG11921-PB | 1..1118 | 17..1134 | 5590 | 100 | Plus |
| fd96Ca-RA | 1119 | CG11921-PA | 1..1118 | 17..1134 | 5590 | 100 | Plus |
| fd96Cb-RA | 816 | CG11922-PA | 24..315 | 40..331 | 455 | 77.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:46:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fd96Ca-RB | 2195 | CG11921-RB | 869..1986 | 17..1134 | 5590 | 100 | Plus |
| fd96Ca-RA | 1702 | CG11921-RA | 376..1493 | 17..1134 | 5590 | 100 | Plus |
| fd96Cb-RA | 1088 | CG11922-RA | 130..421 | 40..331 | 455 | 77.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:45:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25083552..25084669 | 17..1134 | 5590 | 100 | Plus |
| 3R | 32079331 | 3R | 25095141..25095432 | 40..331 | 455 | 77.1 | Plus |
| 3L | 28110227 | 3L | 21475724..21475987 | 316..53 | 225 | 72.3 | Minus |
| 2R | 25286936 | 2R | 22869222..22869366 | 201..345 | 215 | 76.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:45:57 has no hits.
BS30325.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-26 14:34:13 Download gff for
BS30325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fd96Ca-RA | 1..1117 | 17..1133 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:53 Download gff for
BS30325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fd96Ca-RA | 376..1492 | 17..1133 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:48 Download gff for
BS30325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fd96Ca-RA | 376..1492 | 17..1133 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:48 Download gff for
BS30325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25083552..25084668 | 17..1133 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:53 Download gff for
BS30325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20909274..20910390 | 17..1133 | 100 | | Plus |
BS30325.pep Sequence
Translation from 16 to 1134
> BS30325.pep
MPRPSRESYGEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYY
RKNTQRWQNSLRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENG
SLLRRRKRFKLHKNDKDLLNEELTALANLNRFFFTTRNGGSAAHMSPLDM
NNAAAMRLDPLPRSTAHMPNSLGPGVPLPHVMPASMSGADHTNLADMGLT
NLPALTSSEIEGPLSLRPKRSFTIESLITPDKPEHPSEDEDDEDDRVDID
VVECSGISRYPTTPAASEEYMSASRSSRTEDPLPPMHTINAGAHVPFLHY
ATGANVAGLPASGIPNSPTTYELAISHPLFMMAAPIANMHNIYYNNVTLV
APAQQYRSPEVQNRIDNDMRTI*
BS30325.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fd96Ca-PB | 372 | CG11921-PB | 1..372 | 1..372 | 1979 | 100 | Plus |
| fd96Ca-PA | 372 | CG11921-PA | 1..372 | 1..372 | 1979 | 100 | Plus |
| fd96Cb-PA | 271 | CG11922-PA | 1..204 | 1..238 | 552 | 49 | Plus |
| fkh-PD | 510 | CG10002-PD | 199..312 | 2..115 | 414 | 63.2 | Plus |
| fkh-PB | 510 | CG10002-PB | 199..312 | 2..115 | 414 | 63.2 | Plus |
