BS30326.complete Sequence
875 bp assembled on 2012-06-01
GenBank Submission: KX801232
> BS30326.complete
GAAGTTATCAGTCGACATGCCACGCCCATTGAAAATGAGCTACGGTGATC
AGAAGCCTCCCTACTCGTACATATCATTAACGGCCATGGCCATAATACAC
TCGCCGCAAAGATTGCTGCCGCTCAGTGAGATATATCGATTTATAATGGA
TCAGTTTCCATTCTACCGGAAGAACACGCAAAAGTGGCAAAACTCACTGC
GGCACAATCTCAGCTTCAACGATTGCTTCATCAAGGTGCCGAGGAATGTG
ACCAAGGCCGGCAAGGGCTCCTACTGGACACTTCATCCCATGGCCTTCGA
TATGTTCGAGAATGGCAGCCTGCTGCGGCGGCGAAAACGTTTCCGCGTCA
AGCAGCTCGAGAAGGATATTTCGAACTGGAAATTAGCCGCCGCCGCCAAT
ACGGAGATGGTGACCCACTATCTGGACGATCAGCTAACGCAGATGGCCTT
TGCCGATCCGGCGCGGCATGGTCATGTGCTCGCCAATGCATCTGCTGCCC
AAATGTCACCCTACAAGGCTACTCCGCCGATCCTTCCGACGACTGTGACC
CAACTTCCGGCGCGGCCAAAGCGCGCCTTCACCATCGAGAGTCTCATGGC
TCCGGATCCGGCGAGCACGCCAAATGAGGGATTAGTGCCCATGGAGTACG
GCAGTCCCGATGCCGTCGCGTTGGAAAAGCCGCCGTTTAATTTGCCATTC
AATTTCAACGAACTCGCCGCGCAGTATCAGTTATACTTCCCAAGTTTTTT
CTACAACGGCCAATATGGCAACATACCTTGCTACCAGAAAACACCGCCGC
TTTTTCATAACGGCCCGTTGCCCGTCTTTTAAGCTTTCTAGACCTATTCG
TTTTGGCGGCGGCGGGGGCGGGGCG
BS30326.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:31:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fd96Cb-RA | 816 | CG11922-PA | 1..814 | 17..830 | 4070 | 100 | Plus |
| fd96Ca-RB | 1119 | CG11921-PB | 24..315 | 40..331 | 455 | 77.1 | Plus |
| fd96Ca-RA | 1119 | CG11921-PA | 24..315 | 40..331 | 455 | 77.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:31:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fd96Cb-RA | 1088 | CG11922-RA | 107..920 | 17..830 | 4070 | 100 | Plus |
| fd96Ca-RB | 2195 | CG11921-RB | 892..1183 | 40..331 | 455 | 77.1 | Plus |
| fd96Ca-RA | 1702 | CG11921-RA | 399..690 | 40..331 | 455 | 77.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:31:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25095118..25095931 | 17..830 | 4070 | 100 | Plus |
| 3R | 32079331 | 3R | 25083575..25083866 | 40..331 | 455 | 77.1 | Plus |
| 3L | 28110227 | 3L | 21475761..21475855 | 279..185 | 190 | 80 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:31:45 has no hits.
BS30326.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-01 15:19:11 Download gff for
BS30326.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fd96Cb-RA | 10..825 | 17..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:01 Download gff for
BS30326.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fd96Cb-RA | 107..924 | 17..836 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:52 Download gff for
BS30326.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fd96Cb-RA | 107..924 | 17..836 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:52 Download gff for
BS30326.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25095118..25095935 | 17..836 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:01 Download gff for
BS30326.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20920840..20921657 | 17..836 | 99 | | Plus |
BS30326.pep Sequence
Translation from 16 to 831
> BS30326.pep
MPRPLKMSYGDQKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFY
RKNTQKWQNSLRHNLSFNDCFIKVPRNVTKAGKGSYWTLHPMAFDMFENG
SLLRRRKRFRVKQLEKDISNWKLAAAANTEMVTHYLDDQLTQMAFADPAR
HGHVLANASAAQMSPYKATPPILPTTVTQLPARPKRAFTIESLMAPDPAS
TPNEGLVPMEYGSPDAVALEKPPFNLPFNFNELAAQYQLYFPSFFYNGQY
GNIPCYQKTPPLFHNGPLPVF*
BS30326.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fd96Cb-PA | 271 | CG11922-PA | 1..271 | 1..271 | 1460 | 100 | Plus |
| fd96Ca-PB | 372 | CG11921-PB | 1..238 | 1..204 | 552 | 49 | Plus |
| fd96Ca-PA | 372 | CG11921-PA | 1..238 | 1..204 | 552 | 49 | Plus |
| fkh-PD | 510 | CG10002-PD | 199..330 | 2..127 | 406 | 58.3 | Plus |
| fkh-PB | 510 | CG10002-PB | 199..330 | 2..127 | 406 | 58.3 | Plus |
