BS30327.complete Sequence
821 bp assembled on 2012-06-01
GenBank Submission: KX806181
> BS30327.complete
GAAGTTATCAGTCGACATGGATTTCAAGAAGCTGAAGAAAATGGAGGAGG
CGGTGCGCATCGGCGGCAAGGGATCTATGCGCCGCAAGCACAAGAGAAAT
CCATCCCCGGCTGTGGTTGAGAAACGAGTGCAGGCCGAATTGGCCATGTT
ACCGTTGAGGAATATTGGAGAAATTCAAGAGGTGACCATCGAGTTCACCA
ATTCCAGGGAGGTTGTGTTAACCATGCCAAAGGTTCAGGGCACCCCTCCC
AATTCTTTCTTCGTGGTTAGTGGCGATCTCGTGCGCAAATCGTCAACAGC
TGGCCCATCGAAAGTGGCCAAGGCAGCCAATGCGCCCAAGGCACCCATGC
CACCTAAGCCACCCAAGCCGGAAGCTTTTTCCGACAAAAAGCCAGAATCA
GGGGAGTCCATTAAGGTGGCCAAGAAGCCCAAGAAGCCGCGCAATCGTGT
TCGTCCTCGCAACAAGAAGGTTCAAATGATGCTTTCCAAAAACAAAGAGG
AAGCAGCAATGGCTGGCGGGGATTCGGAGCCGAAGCTTAGCAATGGTAAA
TCAATTTTGATCTCCTCTGAAGATGGTAGCGATCCGAATAATGAGAAGGT
GCCATCGGATGAGTCTGATGTGGATCGGACCGTCGTCTGCGCCAAAGATT
CGCTGGGAAGTTTCGGCGATGATTCCGACGGCAAGGAGGACGATGACAGT
AAGGAGTCGATTTACCTATCTTCCTACTCCGATTACTATGATTCCGCGGA
TGAGCAGCTCAATCCGAAGACTTATCGCGCTCAGGTGTCAGAGGACGAAG
ATTAGAAGCTTTCTAGACCAT
BS30327.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:31:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| betaNACtes3-RA | 789 | CG32601-PA | 1..789 | 17..805 | 3945 | 100 | Plus |
| betaNACtes6-RA | 789 | CG32598-PA | 1..789 | 17..805 | 3840 | 99.1 | Plus |
| betaNACtes1-RA | 786 | CG13402-PA | 1..786 | 17..805 | 2935 | 91.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:31:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| betaNACtes3-RA | 967 | CG32601-RA | 118..907 | 17..806 | 3950 | 100 | Plus |
| betaNACtes6-RA | 967 | CG32598-RA | 118..907 | 17..806 | 3845 | 99.1 | Plus |
| betaNACtes1-RA | 1084 | CG13402-RA | 101..886 | 17..805 | 2935 | 91.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:31:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14378977..14379766 | 17..806 | 3950 | 100 | Plus |
| X | 23542271 | X | 14316190..14316979 | 806..17 | 3845 | 99.1 | Minus |
| X | 23542271 | X | 14171685..14172470 | 805..17 | 2935 | 91.8 | Minus |
| X | 23542271 | X | 14380865..14381356 | 318..806 | 1900 | 92.9 | Plus |
| X | 23542271 | X | 14314701..14315021 | 806..486 | 1500 | 97.8 | Minus |
| X | 23542271 | X | 14380507..14380860 | 17..367 | 850 | 83.3 | Plus |
| X | 23542271 | X | 14315096..14315412 | 330..17 | 755 | 83.3 | Minus |
| X | 23542271 | X | 15576748..15576921 | 509..684 | 390 | 83.5 | Plus |
| X | 23542271 | X | 14315018..14315117 | 432..336 | 270 | 87 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:31:49 has no hits.
BS30327.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-01 15:19:12 Download gff for
BS30327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32601-RA | 118..906 | 17..805 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:03 Download gff for
BS30327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| betaNACtes3-RA | 118..906 | 17..805 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:53 Download gff for
BS30327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| betaNACtes3-RA | 118..906 | 17..805 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:53 Download gff for
BS30327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14378977..14379765 | 17..805 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:03 Download gff for
BS30327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14273010..14273798 | 17..805 | 100 | | Plus |
BS30327.pep Sequence
Translation from 16 to 804
> BS30327.pep
MDFKKLKKMEEAVRIGGKGSMRRKHKRNPSPAVVEKRVQAELAMLPLRNI
GEIQEVTIEFTNSREVVLTMPKVQGTPPNSFFVVSGDLVRKSSTAGPSKV
AKAANAPKAPMPPKPPKPEAFSDKKPESGESIKVAKKPKKPRNRVRPRNK
KVQMMLSKNKEEAAMAGGDSEPKLSNGKSILISSEDGSDPNNEKVPSDES
DVDRTVVCAKDSLGSFGDDSDGKEDDDSKESIYLSSYSDYYDSADEQLNP
KTYRAQVSEDED*
BS30327.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| betaNACtes3-PA | 262 | CG32601-PA | 1..262 | 1..262 | 1337 | 100 | Plus |
| betaNACtes6-PA | 262 | CG32598-PA | 1..262 | 1..262 | 1313 | 98.9 | Plus |
| betaNACtes1-PA | 261 | CG13402-PA | 1..261 | 1..262 | 1137 | 87 | Plus |
| betaNACtes4-PA | 263 | CG18313-PA | 1..263 | 1..243 | 945 | 76.4 | Plus |
| betaNACtes2-PA | 197 | CG18157-PA | 1..197 | 1..223 | 725 | 70.7 | Plus |
