BS30431.complete Sequence
1547 bp assembled on 2012-06-01
GenBank Submission: KX800596
> BS30431.complete
GAAGTTATCAGTCGACATGGTTTTGAACGGCATGCCTATAACAATGCCAG
TACCGATGCCAGTGCCCATGCCTGTGCCCAGTCCTCCGGCCACCAAGTCC
CGGGTGGCGATCGACTGGGACATCAACGATTCCAAGATGCCGTCGGTGGG
GGAGTTTGACGATTTCAATGACTGGTCCAACGGACATTGCCGGCTCATCT
ACTCCGTGCAGAGTGATGAGGCCAGGAAACATGCCAGCGGTTGGGCCATG
CGAAACACCAACAACCACAACGTGAATATCCTAAAGAAGAGCTGCCTGGG
AGTGCTCCTCTGCAGTGCCAAGTGCAAGTTGCCCAATGGAGCCAGTGTGC
ATCTGAGACCCGCCATTTGCGACAAGGCCAGAAGGAAGCAGCAGGGCAAA
CAGTGTCCCAATAGAAATTGCAATGGTCGCTTGGAAATCCAGGCTTGCCG
CGGCCACTGCGGCTATCCAGTGACCCACTTCTGGCGCAGGGACGGAAATG
GAATCTATTTCCAGGCCAAGGGCACCCACGATCACCCCAGACCCGAAGCC
AAGGGATCCACGGAAGCCAGGCGACTTTTGGCAGGAGGAAGACGTGTGCG
AAGTTTGGCCGTAATGTTGGCCAGGGAATCGGCGCTGAGCGACAAGCTGA
GTAGCCTGAGACCCACAAAACGGCAGGCCAAGACTCAGTCCATCCAGGAG
AGCAAGCGCAGAAGGATGGGTGCTTCCGATGTGCTCGAAACCAAACAAGA
GTTAGTGGTGCCACCCACCACCTACCTGCCCACATCGACGCCCACACATA
GCACCAACTTTAATCAATCTCAGGGTTCATATGTCCCAGCAGGACAAGGA
TCAGTGATCAGTCAGTGGAATAGAGAGATTCACTACGAAACGGAGGATCC
ATGCTATGCCAATGGAATGTACTCCTACGATATGCTCCACTCACCTCTCT
CAGCGCATAGCTCCACGGGCAGTTATTACCAGGAGAACAAACCGCAGCAA
CTGCAGCACTCACAATACCAGCAGCAACTCTCACCGCAGCAACATGTACC
AGTCAGCTATGATCCCAGCCAGCCAATCTCCTCCAGCCTTCAGTGCGGAA
TGCCTTCGTATGAAATATGCGACGATACGTCCAGTTTGACCAGCAGCTCG
GGCTACTGTTCCGAGGATTATGGCTACTACAATGGATATCTACCCAACTC
GCTGGACGTGAGCAATGGAAGCCAAAGCCAGAATCTTAGCCAGGATGCAA
GTTTCTACACAACCAGCTCGGAGATCTTCAGTGTGTTTGAGTCAACTCTG
AATGGCGGAGGGACCAGTGGCGTGGATCTCATCTACGACGAAGCAACCGC
CTATCAGCAACATCAGCAACAGGGAACTTTTCCGCATCTCACCAATTATC
AACAGGAGCCGCAGGATCAGATGCAGTCCGCCGACTACTACTACAGCAAT
ACGGGAGTGGACAACTCGTGGAACATTCAAATGGACGCGACATATCACCC
AGTCAACAGCACGGATCCCATCTATTGCTAGAAGCTTTCTAGACCAT
BS30431.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:32:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gcm-RB | 1515 | CG12245-PB | 1..1515 | 17..1531 | 7545 | 99.9 | Plus |
| gcm-RA | 1515 | CG12245-PA | 1..1515 | 17..1531 | 7545 | 99.9 | Plus |
| gcm2-RA | 1821 | CG3858-PA | 240..614 | 151..522 | 325 | 73.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:32:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gcm-RB | 2173 | CG12245-RB | 154..1668 | 17..1531 | 7545 | 99.9 | Plus |
| gcm-RA | 1911 | CG12245-RA | 154..1668 | 17..1531 | 7545 | 99.9 | Plus |
| gcm2-RA | 2328 | CG3858-RA | 576..950 | 151..522 | 325 | 73.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:32:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9580003..9581121 | 1531..413 | 5565 | 99.8 | Minus |
| 2L | 23513712 | 2L | 9581195..9581592 | 414..17 | 1990 | 100 | Minus |
| 2L | 23513712 | 2L | 9610830..9611204 | 151..522 | 325 | 73.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:32:44 has no hits.
BS30431.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-01 15:19:22 Download gff for
BS30431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gcm-RA | 151..1665 | 17..1531 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:32 Download gff for
BS30431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gcm-RA | 154..1668 | 17..1531 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:46:19 Download gff for
BS30431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gcm-RA | 154..1668 | 17..1531 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:46:19 Download gff for
BS30431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9580003..9581119 | 415..1531 | 99 | <- | Minus |
| 2L | 9581195..9581592 | 17..414 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:32 Download gff for
BS30431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9580003..9581119 | 415..1531 | 99 | <- | Minus |
| arm_2L | 9581195..9581592 | 17..414 | 100 | | Minus |
BS30431.pep Sequence
Translation from 16 to 1530
> BS30431.pep
MVLNGMPITMPVPMPVPMPVPSPPATKSRVAIDWDINDSKMPSVGEFDDF
NDWSNGHCRLIYSVQSDEARKHASGWAMRNTNNHNVNILKKSCLGVLLCS
AKCKLPNGASVHLRPAICDKARRKQQGKQCPNRNCNGRLEIQACRGHCGY
PVTHFWRRDGNGIYFQAKGTHDHPRPEAKGSTEARRLLAGGRRVRSLAVM
LARESALSDKLSSLRPTKRQAKTQSIQESKRRRMGASDVLETKQELVVPP
TTYLPTSTPTHSTNFNQSQGSYVPAGQGSVISQWNREIHYETEDPCYANG
MYSYDMLHSPLSAHSSTGSYYQENKPQQLQHSQYQQQLSPQQHVPVSYDP
SQPISSSLQCGMPSYEICDDTSSLTSSSGYCSEDYGYYNGYLPNSLDVSN
GSQSQNLSQDASFYTTSSEIFSVFESTLNGGGTSGVDLIYDEATAYQQHQ
QQGTFPHLTNYQQEPQDQMQSADYYYSNTGVDNSWNIQMDATYHPVNSTD
PIYC*
BS30431.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gcm-PB | 504 | CG12245-PB | 1..504 | 1..504 | 2726 | 100 | Plus |
| gcm-PA | 504 | CG12245-PA | 1..504 | 1..504 | 2726 | 100 | Plus |
| gcm2-PA | 606 | CG3858-PA | 53..260 | 18..230 | 637 | 59.2 | Plus |
