BS30507.complete Sequence
365 bp assembled on 2012-07-09
GenBank Submission: KX805971
> BS30507.complete
GAAGTTATCAGTCGACATGACAGACCCCCGCATCCGGCAACTGGTGATTA
AATCCGGAGTGGTCCGGCGGTTGACCAGGGAGAAGTACTGCTACGCCAAG
GAAGTGCTGACCGAGCAGGCGCGGTTGGAGAAGCTCAGGGGCGACGGAGC
CGACGACCACGTACTGCGCAAGCAGGAGGAGGTCATCCAGGAGTGCATCA
TGATGGTGCCCGACTCCAAGAGAAGACTGCAGAAGGAGTACGAGGTACTG
GAAAAGTACCTCGCCGATGAGCAGGACCTGATCGAGACAGATTCGTATAA
GAAGGCAGCAGAGATCCTCAAAGATGCCAAAGCTGAACTGGAGACCTAGA
AGCTTTCTAGACCAT
BS30507.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:40:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1890-RA | 333 | CG1890-PA | 1..333 | 17..349 | 1665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:40:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1890-RA | 704 | CG1890-RA | 140..474 | 17..351 | 1675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:40:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31743629..31743837 | 17..225 | 1045 | 100 | Plus |
3R | 32079331 | 3R | 31743891..31744018 | 224..351 | 640 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:40:32 has no hits.
BS30507.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-09 16:49:24 Download gff for
BS30507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1890-RA | 124..456 | 17..349 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:44 Download gff for
BS30507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1890-RA | 140..472 | 17..349 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:49:01 Download gff for
BS30507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1890-RA | 140..472 | 17..349 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:49:01 Download gff for
BS30507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31743629..31743837 | 17..225 | 100 | -> | Plus |
3R | 31743893..31744016 | 226..349 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:44 Download gff for
BS30507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27569351..27569559 | 17..225 | 100 | -> | Plus |
arm_3R | 27569615..27569738 | 226..349 | 100 | | Plus |
BS30507.pep Sequence
Translation from 16 to 348
> BS30507.pep
MTDPRIRQLVIKSGVVRRLTREKYCYAKEVLTEQARLEKLRGDGADDHVL
RKQEEVIQECIMMVPDSKRRLQKEYEVLEKYLADEQDLIETDSYKKAAEI
LKDAKAELET*
BS30507.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1890-PA | 110 | CG1890-PA | 1..110 | 1..110 | 550 | 100 | Plus |
CG9072-PA | 149 | CG9072-PA | 35..146 | 2..109 | 140 | 29.5 | Plus |