BS30508.complete Sequence
797 bp assembled on 2012-09-04
GenBank Submission: KX805303
> BS30508.complete
GAAGTTATCAGTCGACATGTCCTCCTCGTCGGCCAGAGACCAACCGGGAA
CCTCCCATGACAACTTCGAGGAATTCTACACAGAAGTGAAAGAAATTGAA
AAACGTGATTCAGTTTTAACTCCTTCTCAACAAATTGATCGTTTACTTCG
TCCAGGTTCAACGTACTTCAATCTCAATCCGTTTGAGGTGCTCCAAATCG
AGCCCGAGGTCGAATTGGCGGATATAAAAAAGCGATACCGCACCTTGTCA
ATCCTCGTCCATCCAGACAAGAATCCCGACAACCAGGAGCGCGCTCAAAT
GGCATTCGATATTGTGTCGCGTTCCTGGAAAATCCTCGAAAACGAACTCA
CGCGCAAAAGGTGTCTGGAGGTGTACGAGGAGGCAAAGGGGCGAACGGAT
CAAATGATTGCAGAAAAGCGTAAAAAGCTTAAAAAAGAGGGTCGGCCCAC
TGAGCCAATACCCGAGGACGATCCCACCAAGTACAAGCACGCCATCTACG
TTATGGTCATGAAACTGTTTGCCGACATGGAGCGTCGACGGCAAAAGCTC
GACCAACGCGACCAGGAGGAGCGAAAGCGAAAGCGCGAAACGGAAATCGA
GGAGGAGGAGCGGATAAAGGCGGACCGCGAATGGCAGCAGAACTTCGAAG
AGTCGCGCCAGAGCCGAGTAAACAGCTGGCATGACTTTCAGTCGGGTGCC
GGCAAGTCCAAGAAAGCCAAGAAACAAAAACATATGACCGGCATGATGGT
TCCACCAAAATTTAAGCCCGAGTCGCGATAAAAGCTTTCTAGACCAT
BS30508.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:55:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10375-RA | 765 | CG10375-PA | 1..765 | 17..781 | 3825 | 100 | Plus |
CG10375-RB | 483 | CG10375-PB | 1..483 | 299..781 | 2415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10375-RA | 1008 | CG10375-RA | 90..855 | 16..781 | 3830 | 100 | Plus |
CG10375-RB | 938 | CG10375-RB | 160..785 | 156..781 | 3130 | 100 | Plus |
tst-RA | 4332 | CG10210-RA | 3900..4275 | 781..406 | 1880 | 100 | Minus |
CG10375-RB | 938 | CG10375-RB | 90..161 | 16..87 | 360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:55:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23768456..23768831 | 406..781 | 1880 | 100 | Plus |
3R | 32079331 | 3R | 23768009..23768329 | 86..406 | 1605 | 100 | Plus |
3R | 32079331 | 3R | 23767801..23767872 | 16..87 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:55:56 has no hits.
BS30508.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-04 12:26:06 Download gff for
BS30508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10375-RA | 91..853 | 17..779 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:27 Download gff for
BS30508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10375-RA | 91..853 | 17..779 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:17:09 Download gff for
BS30508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10375-RA | 91..853 | 17..779 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:17:09 Download gff for
BS30508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23767802..23767870 | 17..85 | 100 | -> | Plus |
3R | 23768009..23768329 | 86..406 | 100 | -> | Plus |
3R | 23768457..23768829 | 407..779 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:27 Download gff for
BS30508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19594179..19594551 | 407..779 | 100 | | Plus |
arm_3R | 19593524..19593592 | 17..85 | 100 | -> | Plus |
arm_3R | 19593731..19594051 | 86..406 | 100 | -> | Plus |
BS30508.pep Sequence
Translation from 16 to 780
> BS30508.pep
MSSSSARDQPGTSHDNFEEFYTEVKEIEKRDSVLTPSQQIDRLLRPGSTY
FNLNPFEVLQIEPEVELADIKKRYRTLSILVHPDKNPDNQERAQMAFDIV
SRSWKILENELTRKRCLEVYEEAKGRTDQMIAEKRKKLKKEGRPTEPIPE
DDPTKYKHAIYVMVMKLFADMERRRQKLDQRDQEERKRKRETEIEEEERI
KADREWQQNFEESRQSRVNSWHDFQSGAGKSKKAKKQKHMTGMMVPPKFK
PESR*
BS30508.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:27:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10375-PA | 254 | CG10375-PA | 1..254 | 1..254 | 1322 | 100 | Plus |
CG10375-PB | 160 | CG10375-PB | 1..160 | 95..254 | 838 | 100 | Plus |