BS30514.complete Sequence
1913 bp assembled on 2012-07-30
GenBank Submission: KX804841
> BS30514.complete
GAAGTTATCAGTCGACATGGTTTTAACTAGCGAACAGGTGCCACAGACTT
TGAAGAGCAAGCACAAGAAGCAAAGGCAACGCAATCGACCGCGCAACAAA
CGAAATCGCCTGGAAGACAGCCATTCAACGACACAAGAAACATCAGCCAT
CGACGCCACGAGTGCAATGCCCGGAAATGCTGTGGATCCATTGGCCACGG
AGAAGACTCGTGACCAGATAATGGCCGAGCGGGAGGCGAAGAAGCTGGCT
AAGCAGGCCAAGAAACAGAAAACTGCACCGACTCCTACTGCCGCCACTCC
TGCTGTTCTGACCACTCCCTCTGCTCCGGCCACCAAAATCATCACTGAAG
TGGAGCAGACCACCATTACCACTAAGCTGACGACCACCACCACAACAAAG
GTGCAGGATGCAGTGGCTTCAAAGACGACTCAGCCAGCTGCGGTAAATGG
CAAGGATGCGGAGGCGGGTGAAAAGACACGCGAGCAGATCAAGGCGGAAC
GCGAGGCCAAGAAGGCAGCCAAGAAAGCTGGCAAAGGCGGGGGAGCCAAG
GTAGAGGGCATCGCACAACAGCTCGCTGACCTGAAAGTAGCAGAAAAAGC
TCCAGTCGCAGCCAGTGCTGCACCTTCGACAACAGAAGCGGACCAGGAAA
AGAAAAAGCCAGCTCTTAGCAAAGCGGAGCGTCGCGCTATCCAAGAAGCC
CAACGGGCAGCCAAGGCCCAGGTACAGACTAAAAAGGCCCAGCATGCAGC
CAAGGCACCACCCAGCGCAGCTCCCAAAGGGCCGAACCGGAAGAGCGTTT
CCCCCACCACAGCGGCCACCAGCAGTTCCCCCGTCAAATGTCCAGCCAGC
ACGCCCAATGTAGACTGCCGGGTGAAGCTGTTCAACCATCTGGTGTGCGC
CAAGGAAGACAGCCAGTTCATCAACGATCCACTCGTTCATCCGAGCATTG
CGCGCTTGGGTGTTCAGTACGCCAAGCGCACGGTGGTGGGGTCCAATGCT
CGATGCATTGCCTTCCTGCACGCCCTGCGCCAGGTTGTCCACGACTTTGA
GACGCCCGCCAAGAAGGAGTTTGGTCGCAGCCTGGACGCCGCCGTGAAGC
ACCACGTAGACCACCTGCACAAGTGCCGACCGCTGGCCGTGTCCGTGTCC
AATGCGTACAAACAATTCAAGAACCAACTGACACAGCTGCCGGCGGATGT
TCCCGAAACGGAGTCGAAGGAGCTGCTCGTCCACTTCATCGATACTTACA
TTGAAAATCAAATCGGCAAGGCGGCCCAAGCGATCAGCGGTTTTCTGCAG
GAAAAGATCACCGATGGCGACGTGCTGCTGACCTTCGCCTGTTCCTCCCT
CATTCAGTTCATCTGCGAGGAGGCCAAGCGGCGCCAGGTGGCCTTCCGCG
TGATTGTCGTCGATTCGCGACCCGGATGCGAAGGCCAGGAGCTGCTGCGC
CGACTGCACGCCACCGGAATCCCGTGCACCTACGTGCTGATCAACGCCGT
GGGCTATGTGATGGCGGAGGCCACGAAGGTGCTGCTGGGAGCACACGCCC
TGCTGGCCAACGGATACGTGATGGCGCGAACGGGCACCGCCCAGGTGGCC
CTGGTGGCCAATGCCCACAACGTGCCGGTGCTCGTGTGCTGCGAGACGCA
CAAGTTCAGCGAGCGCTTCCAGACGGACGCCATCGTCTACAACGAGCTGA
GCGATCCCAACCAACTGGTGCGCGGCGACAAGTGCCAGCTAAGCAACTGG
GCGGCCAAGGGAAAGCTGTTGCCGCTCAACCTGAGCTACGACATTACTCC
GCCGGAGCTGGTGAGTGCCGTGGTCACCGAGGTGGCCATCCTGCCCTGCA
CCAGTGTTCCCGTCATACTCCGCATCAAGCCAGACATTGGCTACTAAAAG
CTTTCTAGACCAT
BS30514.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:56:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF2B-delta-RA | 1881 | CG10315-PA | 1..1881 | 17..1897 | 9405 | 100 | Plus |
| eIF2B-delta-RD | 1731 | CG10315-PD | 1..1731 | 167..1897 | 8655 | 100 | Plus |
| eIF2B-delta-RB | 1731 | CG10315-PB | 1..1731 | 167..1897 | 8655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:56:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF2B-delta-RA | 2071 | CG10315-RA | 111..1991 | 17..1897 | 9405 | 100 | Plus |
| eIF2B-delta-RD | 2098 | CG10315-RD | 165..2018 | 44..1897 | 9270 | 100 | Plus |
| eIF2B-delta-RB | 2034 | CG10315-RB | 101..1954 | 44..1897 | 9270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:56:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23388287..23388972 | 1212..1897 | 3430 | 100 | Plus |
| 2R | 25286936 | 2R | 23387004..23387612 | 44..652 | 3045 | 100 | Plus |
| 2R | 25286936 | 2R | 23387670..23388232 | 651..1213 | 2815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:56:29 has no hits.
BS30514.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 10:23:13 Download gff for
BS30514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF2B-delta-RA | 139..2017 | 17..1895 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:28 Download gff for
BS30514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF2B-delta-RA | 111..1989 | 17..1895 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:59 Download gff for
BS30514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF2B-delta-RA | 111..1989 | 17..1895 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:59 Download gff for
BS30514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23386798..23386827 | 17..46 | 100 | -> | Plus |
| 2R | 23387007..23387612 | 47..652 | 100 | -> | Plus |
| 2R | 23387672..23388232 | 653..1213 | 100 | -> | Plus |
| 2R | 23388289..23388970 | 1214..1895 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:28 Download gff for
BS30514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19274321..19274350 | 17..46 | 100 | -> | Plus |
| arm_2R | 19274530..19275135 | 47..652 | 100 | -> | Plus |
| arm_2R | 19275195..19275755 | 653..1213 | 100 | -> | Plus |
| arm_2R | 19275812..19276493 | 1214..1895 | 100 | | Plus |
BS30514.pep Sequence
Translation from 16 to 1896
> BS30514.pep
MVLTSEQVPQTLKSKHKKQRQRNRPRNKRNRLEDSHSTTQETSAIDATSA
MPGNAVDPLATEKTRDQIMAEREAKKLAKQAKKQKTAPTPTAATPAVLTT
PSAPATKIITEVEQTTITTKLTTTTTTKVQDAVASKTTQPAAVNGKDAEA
GEKTREQIKAEREAKKAAKKAGKGGGAKVEGIAQQLADLKVAEKAPVAAS
AAPSTTEADQEKKKPALSKAERRAIQEAQRAAKAQVQTKKAQHAAKAPPS
AAPKGPNRKSVSPTTAATSSSPVKCPASTPNVDCRVKLFNHLVCAKEDSQ
FINDPLVHPSIARLGVQYAKRTVVGSNARCIAFLHALRQVVHDFETPAKK
EFGRSLDAAVKHHVDHLHKCRPLAVSVSNAYKQFKNQLTQLPADVPETES
KELLVHFIDTYIENQIGKAAQAISGFLQEKITDGDVLLTFACSSLIQFIC
EEAKRRQVAFRVIVVDSRPGCEGQELLRRLHATGIPCTYVLINAVGYVMA
EATKVLLGAHALLANGYVMARTGTAQVALVANAHNVPVLVCCETHKFSER
FQTDAIVYNELSDPNQLVRGDKCQLSNWAAKGKLLPLNLSYDITPPELVS
AVVTEVAILPCTSVPVILRIKPDIGY*
BS30514.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF2B-delta-PA | 626 | CG10315-PA | 1..626 | 1..626 | 3163 | 100 | Plus |
| eIF2B-delta-PD | 576 | CG10315-PD | 1..576 | 51..626 | 2913 | 100 | Plus |
| eIF2B-delta-PB | 576 | CG10315-PB | 1..576 | 51..626 | 2913 | 100 | Plus |
| eIF2B-delta-PC | 576 | CG10315-PC | 1..576 | 51..626 | 2913 | 100 | Plus |
| eIF2B-alpha-PA | 306 | CG7883-PA | 43..297 | 349..614 | 211 | 26.9 | Plus |
