BS30522.complete Sequence
2525 bp assembled on 2012-07-30
GenBank Submission: KX801266
> BS30522.complete
GAAGTTATCAGTCGACATGGATATAAGTGTCTTTGAATGGAAGAAAGTGG
ATCTTTTCAATATAATCGTCGTACCATTTGTAAAAATTCCGAACACGGCA
GAAATATCGTGCTACTGCTTTCCCGAATCAAAATCAAGCACTGAGGAAAG
AAATATAAAATTAGTAATTTGTGATAAGAACAGAAATATTCTTATTTACC
TTTCAAATTGGGAGTGTATTACCTTCAAATCTCCATCCACGCGGAAAGCT
ATTGCTCTTTGTTCCCTTACCAGCAATAACAGCCTTGCGACTGTCACACC
GGATATCAATAATGGTATTCACATTGATATATTTGACCTTAATAGATTAA
CAAAAAAGCAAGCAGCTCCAATAATTGCATCTGCATATACTCAGCCTTCA
AGTACGCCCTTATGCCTCAACGCAGACGTCATTGACGATAAATTGTTTGC
GTTGGCGATAGGATTGGGAAATGGTGATATTCTTTTGCATTATGGAAAAA
TCACAAAAAATTTTTCTGCAAATATTCGCCAACATACTGTTTCTGGAAAC
GCAGTCAATGGAATACATTTTGATTTCAAAACACAACCTTTAGATACAAC
TCAAATAATGTTTGTGACATGTGTTCAAGGAGTTTATTGTTTTATGTTAA
AAGAGAAATGCATAATGGATACAAAATTTGTACTTGATAATGATAAAGGT
AATCTTAATTACCGCAGTATAATGTGCAAGGCTGGAGGTGGCGAAATAAA
TGATTCAATGTTGGTTGTGGGACGGGCAGACGCTGTTTATTGCTACACTC
CTGAGGGAAGGGGTCCTTGTTTTGCTATCGAAGGAGCAAAGGAATGCCTG
GCTTGGGTAGGCCATTACCTAATCGTCGGCGTCAAAAATTCAAACTTAAA
GCAGAATGCAACGACACTAATTGTTTTAGATACGGAAAACAAAATAATAG
TTTTTCAAAGGCAATTTCAGGAATTGTTTTATGTAATCAGTGAAAACAAT
TTTTGTTATATTGTTACGAATTCTGGCGACACGGATGCTTGCAACATGTT
AATGTTAGAAAAAAACAGCATAGATGTTAATATACGTCTCTTAGTTGAAA
AACATATGTATAACATTGCATTGAGATTGTTGCATCGAGAAGGCTATACT
TCATCGCCAGAAACTGCATTGGTACGATTTCAGTACGGAAATCACTTACT
TCAAAAAGGCGACTTCAGTAGAGCTACTCAAGAATTTATTAAAACCATCG
GTTTTATTAAACCGTATGCTGTCATTTCGAAGCTTTTATATTCCAGATAC
AATACTTATTTACTAAATTACTTGACTGAATGGAAAAAAAAGAATGAGAG
TTCAAGCTGTCATACAAGACTTATTGAATGCTGTATTAAGCGTGATCAAA
TTGAACATGAAATGCAGCAAGATGATTTCAAGCACTATAAAAGCCCTGCG
AAAATAAAACATCTTGCAACCCTATCAAAAATGTATTTCGCATGTACCCC
GTCCAATCAGGTCCCAGTTGAAGAAGAGCATTTATTACATCAATTGCTAG
AATATGGACCTGCATCTCTAGCAGTTGATCTCACTACTTATTTAAATAAT
ATAACATTTGAAAATGTAAAAGAATCAAAAAATATTCTTTCGTTTTGTTC
CATTTTAGCAGATCATAACGATTATTGCGCTAAAATGTTAGCTAAAATCA
TAGAAGCTTTTCCAGTCTGTGACGAAAAACTATTGTTTTATTTGCTGGTC
TTTTATTTCAAACTCTGGAGATTAGATAAAGTAACTTCAAGTTTTGTCTC
AGATTTTATAAAGACACATAGCTTGCGGATGGACAAAACTATCATTGTAA
GTAGGCTTTATACATTTTTTAATGTTACACAAAGAATACACGGCCATCAA
AAAAATACAGGCACATTGCATAACGAAACAATAGACAAGTGCATTGAAAA
CCTAATAAAAAATAATCCCGATGTGGCTTTAAATGAAAATTTAAGTAAAA
GATCATTTCTCATGATGTTAAAAAGTTCTTGCTCTACTGAAGAAATAAAA
GCAATAAAGATAAAACCAATATTTAAGGATCGATTATTGCGAAGTATAGT
TGATTCTGCAAATGAATTAAAGTTAGTTGAGAATTTCAACGAAAAGATTA
AGAGGTCGAGATCCATGCTGTCTCTCTATACAAACAATCCAATCGAGTTT
CGTAATGATAAATGTGACATCTGTCGTGAAATGTTAAGTATGCAGTCCAT
TTATTTTCTTTGTCAACATTCCTTTCATGAAGAATGCCTCAATTACAAAT
CGACCAAACGCCAAGAAAAGTTTTTATGTATTATATGTAAAACAAGAAAT
TTGTTAAGTCCAAAACATTCTTCCAATTTTTCCTGTGATTCTTCAGATAC
TATTGCAGTACTTGCAAAAATAGTTTCTATAGGAAATAAGTTAGAAACTA
AACTTATGATAAGAGGACGGCAAAAAAGCGATGGCGTTACTTGTAACCCT
TTTAATTAAAAGCTTTCTAGACCAT
BS30522.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:56:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32350-RA | 2493 | CG32350-PA | 1..2493 | 17..2509 | 12465 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:56:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32350-RA | 2844 | CG32350-RA | 113..2607 | 17..2511 | 12475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:56:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 23147893..23150387 | 2511..17 | 12475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:56:18 has no hits.
BS30522.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 10:23:12 Download gff for
BS30522.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32350-RA | 103..2593 | 17..2507 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:23 Download gff for
BS30522.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32350-RA | 113..2603 | 17..2507 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:55 Download gff for
BS30522.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32350-RA | 113..2603 | 17..2507 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:55 Download gff for
BS30522.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 23147897..23150387 | 17..2507 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:23 Download gff for
BS30522.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 23140997..23143487 | 17..2507 | 100 | | Minus |
BS30522.pep Sequence
Translation from 16 to 2508
> BS30522.pep
MDISVFEWKKVDLFNIIVVPFVKIPNTAEISCYCFPESKSSTEERNIKLV
ICDKNRNILIYLSNWECITFKSPSTRKAIALCSLTSNNSLATVTPDINNG
IHIDIFDLNRLTKKQAAPIIASAYTQPSSTPLCLNADVIDDKLFALAIGL
GNGDILLHYGKITKNFSANIRQHTVSGNAVNGIHFDFKTQPLDTTQIMFV
TCVQGVYCFMLKEKCIMDTKFVLDNDKGNLNYRSIMCKAGGGEINDSMLV
VGRADAVYCYTPEGRGPCFAIEGAKECLAWVGHYLIVGVKNSNLKQNATT
LIVLDTENKIIVFQRQFQELFYVISENNFCYIVTNSGDTDACNMLMLEKN
SIDVNIRLLVEKHMYNIALRLLHREGYTSSPETALVRFQYGNHLLQKGDF
SRATQEFIKTIGFIKPYAVISKLLYSRYNTYLLNYLTEWKKKNESSSCHT
RLIECCIKRDQIEHEMQQDDFKHYKSPAKIKHLATLSKMYFACTPSNQVP
VEEEHLLHQLLEYGPASLAVDLTTYLNNITFENVKESKNILSFCSILADH
NDYCAKMLAKIIEAFPVCDEKLLFYLLVFYFKLWRLDKVTSSFVSDFIKT
HSLRMDKTIIVSRLYTFFNVTQRIHGHQKNTGTLHNETIDKCIENLIKNN
PDVALNENLSKRSFLMMLKSSCSTEEIKAIKIKPIFKDRLLRSIVDSANE
LKLVENFNEKIKRSRSMLSLYTNNPIEFRNDKCDICREMLSMQSIYFLCQ
HSFHEECLNYKSTKRQEKFLCIICKTRNLLSPKHSSNFSCDSSDTIAVLA
KIVSIGNKLETKLMIRGRQKSDGVTCNPFN*
BS30522.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32350-PA | 830 | CG32350-PA | 1..830 | 1..830 | 4352 | 100 | Plus |
