BS30601.complete Sequence
878 bp assembled on 2013-01-07
GenBank Submission: KX800889
> BS30601.complete
GAAGTTATCAGTCGACATGTTCTACCTAATCGGCCTCGGCCTTGGCGACC
TGAAGGACATCACGGTCAAGGGTCTGGAGATAGTGAAGCAATGCAGTCGC
GTCTATCTGGAGATGTACACCTCGATTCTGGGCTGCAGCCTTGAGGATAT
GCAAGAGTTCTATGGACGACCACTGCTGCTAGCCGACCGCGATCTGGTGG
AGCAGGGTGCGGATGAGATCCTGGCGGGTGCGGGCGAATCCGATGTTGCG
CTGCTCGTGGTGGGCGACCCCTTTGGCGCCACCACCCACACAGACTTCAT
ACTGCGCGCCAAGGAGAAGAACATCCCCTACAAGGTCATCCACAATGCAT
CGATCATGAACGCCGTCGGCTGCTGCGGCCTGCAATTGTACAAATTCGGC
GAGACCGTTTCGATTCCGTACTGGGACGAGACATGGAAGCCGGACAGCTT
CTACGACAAGATCAAGCTGAATCGCCTGCACAACATGCACACGCTGTGCC
TGCTGGACATCAAGGTGAAGGAGCCCACGCCGGAGTCCTTGATGCGCAAA
CGCAAGGAGTACATGCCACCGCGTTTCATGACCGTGGCGGAGGCGGCTCA
TCAGTTGCTGTCCATTGTGGAGAAGAAGGACTCGCTGGAGAAGAACACAG
TGCTCAACGAGCAGTCACTGTGCGTTGGACTGGCCCGTGTTGGCCAGGAG
TCGCAGCAGATTGCCGTTGGCACGCTGCTTGAGATGCGCTCGACCGATTT
GGGCGGACCGCTGCACTCGCTCATCATTCCCGCCAAGGAGATGCATCCGC
TGGAGGTGGAGTTCTTGCAGCAGTATGCCCCCAGCATCAAGCTGGACGAC
TACAACCACTAAAAGCTTTCTAGACCAT
BS30601.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:03:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dph5-RA | 846 | CG31289-PA | 1..846 | 17..862 | 4230 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:03:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dph5-RA | 1128 | CG31289-RA | 105..951 | 16..862 | 4235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:03:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22582205..22582916 | 862..151 | 3560 | 100 | Minus |
3R | 32079331 | 3R | 22582986..22583121 | 151..16 | 680 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:03:36 has no hits.
BS30601.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-07 15:31:35 Download gff for
BS30601.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dph5-RA | 114..952 | 22..860 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:59:28 Download gff for
BS30601.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dph5-RA | 111..949 | 22..860 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:20:26 Download gff for
BS30601.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dph5-RA | 111..949 | 22..860 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:20:26 Download gff for
BS30601.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22582207..22582915 | 152..860 | 100 | <- | Minus |
3R | 22582986..22583115 | 22..151 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:59:28 Download gff for
BS30601.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18407929..18408637 | 152..860 | 100 | <- | Minus |
arm_3R | 18408708..18408837 | 22..151 | 100 | | Minus |
BS30601.pep Sequence
Translation from 16 to 861
> BS30601.pep
MFYLIGLGLGDLKDITVKGLEIVKQCSRVYLEMYTSILGCSLEDMQEFYG
RPLLLADRDLVEQGADEILAGAGESDVALLVVGDPFGATTHTDFILRAKE
KNIPYKVIHNASIMNAVGCCGLQLYKFGETVSIPYWDETWKPDSFYDKIK
LNRLHNMHTLCLLDIKVKEPTPESLMRKRKEYMPPRFMTVAEAAHQLLSI
VEKKDSLEKNTVLNEQSLCVGLARVGQESQQIAVGTLLEMRSTDLGGPLH
SLIIPAKEMHPLEVEFLQQYAPSIKLDDYNH*
BS30601.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:02:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dph5-PA | 281 | CG31289-PA | 1..281 | 1..281 | 1461 | 100 | Plus |