BS30612.complete Sequence
392 bp assembled on 2012-07-09
GenBank Submission: KX805474
> BS30612.complete
GAAGTTATCAGTCGACATGAGCTCCGCGGAAGAAAACAGCAACAGCCCGG
CCACCACGCCCCAGGACACCGAGACCACCGAGCAGGCTAACCTCACGGAT
CTCGAGAAGATCGAGGAGGAGAAACTCAAGTCCAAGTATCCCAGCGGAAT
GCGCGTGCCGGGCGGACACTCGGCCTTCCTCCAGAAAAGGCTGCAGAAGG
GGCAAAAGTTCTTCGACTCGGGCGATTACCAGATGGCCAAGCAGAAGGGT
GGCGGCGTCAAGCAGGTCTTTGCCAACAAGGTGACCACCGGGGAGGCCAT
TCCCACGCCCGAAACCGTGCCGGCGCGCAAGACTTCGATCATCCAACCCT
GTAACAAGTTCCCGGCGACGAGCTAAAAGCTTTCTAGACCAT
BS30612.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:40:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| endos-RF | 360 | CG6513-PF | 1..360 | 17..376 | 1800 | 100 | Plus |
| endos-RE | 360 | CG6513-PE | 1..360 | 17..376 | 1800 | 100 | Plus |
| endos-RD | 360 | CG6513-PD | 1..360 | 17..376 | 1800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:41:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| endos-RF | 1165 | CG6513-RF | 384..743 | 17..376 | 1800 | 100 | Plus |
| endos-RE | 1356 | CG6513-RE | 329..688 | 17..376 | 1800 | 100 | Plus |
| endos-RD | 1191 | CG6513-RD | 410..769 | 17..376 | 1800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:40:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14030807..14030992 | 202..17 | 930 | 100 | Minus |
| 3L | 28110227 | 3L | 14030247..14030421 | 376..202 | 875 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:40:58 has no hits.
BS30612.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-09 16:49:28 Download gff for
BS30612.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| endos-RA | 327..684 | 17..374 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:51 Download gff for
BS30612.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| endos-RD | 410..767 | 17..374 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:49:10 Download gff for
BS30612.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| endos-RD | 410..767 | 17..374 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:49:10 Download gff for
BS30612.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14030249..14030420 | 203..374 | 100 | <- | Minus |
| 3L | 14030807..14030992 | 17..202 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:51 Download gff for
BS30612.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14023907..14024092 | 17..202 | 100 | | Minus |
| arm_3L | 14023349..14023520 | 203..374 | 100 | <- | Minus |
BS30612.pep Sequence
Translation from 16 to 375
> BS30612.pep
MSSAEENSNSPATTPQDTETTEQANLTDLEKIEEEKLKSKYPSGMRVPGG
HSAFLQKRLQKGQKFFDSGDYQMAKQKGGGVKQVFANKVTTGEAIPTPET
VPARKTSIIQPCNKFPATS*
BS30612.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:08:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| endos-PF | 119 | CG6513-PF | 1..119 | 1..119 | 614 | 100 | Plus |
| endos-PE | 119 | CG6513-PE | 1..119 | 1..119 | 614 | 100 | Plus |
| endos-PD | 119 | CG6513-PD | 1..119 | 1..119 | 614 | 100 | Plus |
| endos-PC | 119 | CG6513-PC | 1..119 | 1..119 | 614 | 100 | Plus |
| endos-PB | 119 | CG6513-PB | 1..119 | 1..119 | 614 | 100 | Plus |
