BS30613.complete Sequence
1355 bp assembled on 2012-09-04
GenBank Submission: KX804982
> BS30613.complete
GAAGTTATCAGTCGACATGGCAATCCAACTGGACAAGATTCTGCAGGACA
TCGCCAAAGAAAAGGTGCTGCATCCAAACAATGGCGGCGCCAGCAAGCAG
GAGCAGGAGGAGGCGTGGGCCAGGATCGGGCGTCTCAACAAGCTCTCTGT
GCACGAATCGCGCTCCATCTTCATAGTGCTCCAAAAGAAGTACGAGCAGG
AAAAGCTAAAGGGCAATTCGGCGTGGAAGCTCTTCAGTCTGATGCATCAG
ATCCATCAGGAGCCTAAAATCTCAATCAAGGAGGAGAATGATCAAGTACC
CATGGAGGAGGTGGAGGAGTACGAAATGCTGGAGGTGCAGGAGCCTGAGG
ACGAGGATGACGCCCATCAGTACGGACAGCACACCAACTCTACCGGCTCG
GCGTCCTCCGACGGCGAAAGCCCCACAAAGTCACACAGCACCGGTTCGCC
AGAAAAGGACGAGCGGTTGGCGTACGCCAAACCCAACGTCGACACTCCTC
GCCCAGCCATCGAGGAGAAAAAGCTGCTCAACACACTGGCTAACAACACA
CCGCGAAGTAGCTCGCTGTCCGCCGCCGCAGCAGTACTGCAAAAGAAGGG
AATTACTGTGAAGAAGACGCCCAGCTCCGCAGCAGCACCGAAACCGGCTA
TTGGGCAACAGGCGCCAGCCAGTGGGCAAAGATCAAGCTCCTCGCGCACC
ACCATTCAGCTGCCAGATTCTTTGAAGCGCAAACTTTCGGAGGAGTACAC
CTCGTCATCGGCGCAAAAAAAGCAGACCAAGACCACGAGCCCGAAACAAG
CCGCTTCATCGGCAGCCGCAACTTCAGTGCACACCAGCGTTCCAGATCAA
CTGCCGGCGGGAAACAATGTGGTGCACACAACCACTGCCCAGCTGATGCA
GGTTAAGAAGGAGCGTGAGGACAACCAGACACCACCGCCGGGTATCAACA
TCATCACCATTCCATCGGCACAACAGATAAACGGTGGTGGTGGGGGAGCG
AACTCATCGACAGCCGCCACCATTGCTTCCACCTCGGTGGCTTCCACAAA
CGGCTTTTCGCCACACATCGACGAGCTGGACTTTAAGAATGACATTATCT
TCGGGCCGAAGATCAACGCCGCCTCCTCCAATACACCCGAGATTATCAAC
CTGGGCAACTTTGACAACTCGCTGCCGCCAACCTTTTTCAAGAATCTATG
CAACTCGTCGCGACACGAGTCTCTCGGGCTGTACGTGGCCAATGTGATGA
ACAGACTCTCTTCGCGTGCCTCCGCCAAGCTGGAGCTGTCCATCTTGCGC
GCCATCCTCGATGTGCAGAGCGACGAACTGGAGCAGTAGAAGCTTTCTAG
ACCAT
BS30613.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:55:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Map60-RA | 1323 | CG1825-PA | 1..1323 | 17..1339 | 6615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Map60-RA | 1814 | CG1825-RA | 163..1486 | 17..1340 | 6620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:55:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9591365..9592416 | 289..1340 | 5260 | 100 | Plus |
2R | 25286936 | 2R | 9591029..9591300 | 17..288 | 1360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:55:12 has no hits.
BS30613.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-04 11:55:41 Download gff for
BS30613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Map60-RA | 204..1526 | 17..1339 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:11 Download gff for
BS30613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Map60-RA | 163..1485 | 17..1339 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:16:48 Download gff for
BS30613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Map60-RA | 163..1485 | 17..1339 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:16:48 Download gff for
BS30613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9591029..9591300 | 17..288 | 100 | -> | Plus |
2R | 9591365..9592415 | 289..1339 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:11 Download gff for
BS30613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5478534..5478805 | 17..288 | 100 | -> | Plus |
arm_2R | 5478870..5479920 | 289..1339 | 100 | | Plus |
BS30613.pep Sequence
Translation from 16 to 1338
> BS30613.pep
MAIQLDKILQDIAKEKVLHPNNGGASKQEQEEAWARIGRLNKLSVHESRS
IFIVLQKKYEQEKLKGNSAWKLFSLMHQIHQEPKISIKEENDQVPMEEVE
EYEMLEVQEPEDEDDAHQYGQHTNSTGSASSDGESPTKSHSTGSPEKDER
LAYAKPNVDTPRPAIEEKKLLNTLANNTPRSSSLSAAAAVLQKKGITVKK
TPSSAAAPKPAIGQQAPASGQRSSSSRTTIQLPDSLKRKLSEEYTSSSAQ
KKQTKTTSPKQAASSAAATSVHTSVPDQLPAGNNVVHTTTAQLMQVKKER
EDNQTPPPGINIITIPSAQQINGGGGGANSSTAATIASTSVASTNGFSPH
IDELDFKNDIIFGPKINAASSNTPEIINLGNFDNSLPPTFFKNLCNSSRH
ESLGLYVANVMNRLSSRASAKLELSILRAILDVQSDELEQ*
BS30613.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:27:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Map60-PA | 440 | CG1825-PA | 1..440 | 1..440 | 2216 | 100 | Plus |