Clone BS30613 Report

Search the DGRC for BS30613

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:306
Well:13
Vector:pDNR-Dual
Associated Gene/TranscriptMap60-RA
Protein status:BS30613.pep: full length peptide match
Sequenced Size:1355

Clone Sequence Records

BS30613.complete Sequence

1355 bp assembled on 2012-09-04

GenBank Submission: KX804982

> BS30613.complete
GAAGTTATCAGTCGACATGGCAATCCAACTGGACAAGATTCTGCAGGACA
TCGCCAAAGAAAAGGTGCTGCATCCAAACAATGGCGGCGCCAGCAAGCAG
GAGCAGGAGGAGGCGTGGGCCAGGATCGGGCGTCTCAACAAGCTCTCTGT
GCACGAATCGCGCTCCATCTTCATAGTGCTCCAAAAGAAGTACGAGCAGG
AAAAGCTAAAGGGCAATTCGGCGTGGAAGCTCTTCAGTCTGATGCATCAG
ATCCATCAGGAGCCTAAAATCTCAATCAAGGAGGAGAATGATCAAGTACC
CATGGAGGAGGTGGAGGAGTACGAAATGCTGGAGGTGCAGGAGCCTGAGG
ACGAGGATGACGCCCATCAGTACGGACAGCACACCAACTCTACCGGCTCG
GCGTCCTCCGACGGCGAAAGCCCCACAAAGTCACACAGCACCGGTTCGCC
AGAAAAGGACGAGCGGTTGGCGTACGCCAAACCCAACGTCGACACTCCTC
GCCCAGCCATCGAGGAGAAAAAGCTGCTCAACACACTGGCTAACAACACA
CCGCGAAGTAGCTCGCTGTCCGCCGCCGCAGCAGTACTGCAAAAGAAGGG
AATTACTGTGAAGAAGACGCCCAGCTCCGCAGCAGCACCGAAACCGGCTA
TTGGGCAACAGGCGCCAGCCAGTGGGCAAAGATCAAGCTCCTCGCGCACC
ACCATTCAGCTGCCAGATTCTTTGAAGCGCAAACTTTCGGAGGAGTACAC
CTCGTCATCGGCGCAAAAAAAGCAGACCAAGACCACGAGCCCGAAACAAG
CCGCTTCATCGGCAGCCGCAACTTCAGTGCACACCAGCGTTCCAGATCAA
CTGCCGGCGGGAAACAATGTGGTGCACACAACCACTGCCCAGCTGATGCA
GGTTAAGAAGGAGCGTGAGGACAACCAGACACCACCGCCGGGTATCAACA
TCATCACCATTCCATCGGCACAACAGATAAACGGTGGTGGTGGGGGAGCG
AACTCATCGACAGCCGCCACCATTGCTTCCACCTCGGTGGCTTCCACAAA
CGGCTTTTCGCCACACATCGACGAGCTGGACTTTAAGAATGACATTATCT
TCGGGCCGAAGATCAACGCCGCCTCCTCCAATACACCCGAGATTATCAAC
CTGGGCAACTTTGACAACTCGCTGCCGCCAACCTTTTTCAAGAATCTATG
CAACTCGTCGCGACACGAGTCTCTCGGGCTGTACGTGGCCAATGTGATGA
ACAGACTCTCTTCGCGTGCCTCCGCCAAGCTGGAGCTGTCCATCTTGCGC
GCCATCCTCGATGTGCAGAGCGACGAACTGGAGCAGTAGAAGCTTTCTAG
ACCAT

BS30613.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:55:13
Subject Length Description Subject Range Query Range Score Percent Strand
Map60-RA 1323 CG1825-PA 1..1323 17..1339 6615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:14
Subject Length Description Subject Range Query Range Score Percent Strand
Map60-RA 1814 CG1825-RA 163..1486 17..1340 6620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9591365..9592416 289..1340 5260 100 Plus
2R 25286936 2R 9591029..9591300 17..288 1360 100 Plus
Blast to na_te.dros performed on 2014-11-28 12:55:12 has no hits.

BS30613.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-04 11:55:41 Download gff for BS30613.complete
Subject Subject Range Query Range Percent Splice Strand
Map60-RA 204..1526 17..1339 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:11 Download gff for BS30613.complete
Subject Subject Range Query Range Percent Splice Strand
Map60-RA 163..1485 17..1339 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:16:48 Download gff for BS30613.complete
Subject Subject Range Query Range Percent Splice Strand
Map60-RA 163..1485 17..1339 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:16:48 Download gff for BS30613.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9591029..9591300 17..288 100 -> Plus
2R 9591365..9592415 289..1339 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:11 Download gff for BS30613.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5478534..5478805 17..288 100 -> Plus
arm_2R 5478870..5479920 289..1339 100   Plus

BS30613.pep Sequence

Translation from 16 to 1338

> BS30613.pep
MAIQLDKILQDIAKEKVLHPNNGGASKQEQEEAWARIGRLNKLSVHESRS
IFIVLQKKYEQEKLKGNSAWKLFSLMHQIHQEPKISIKEENDQVPMEEVE
EYEMLEVQEPEDEDDAHQYGQHTNSTGSASSDGESPTKSHSTGSPEKDER
LAYAKPNVDTPRPAIEEKKLLNTLANNTPRSSSLSAAAAVLQKKGITVKK
TPSSAAAPKPAIGQQAPASGQRSSSSRTTIQLPDSLKRKLSEEYTSSSAQ
KKQTKTTSPKQAASSAAATSVHTSVPDQLPAGNNVVHTTTAQLMQVKKER
EDNQTPPPGINIITIPSAQQINGGGGGANSSTAATIASTSVASTNGFSPH
IDELDFKNDIIFGPKINAASSNTPEIINLGNFDNSLPPTFFKNLCNSSRH
ESLGLYVANVMNRLSSRASAKLELSILRAILDVQSDELEQ*

BS30613.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:27:05
Subject Length Description Subject Range Query Range Score Percent Strand
Map60-PA 440 CG1825-PA 1..440 1..440 2216 100 Plus