BS30625.complete Sequence
1781 bp assembled on 2012-07-30
GenBank Submission: KX800402
> BS30625.complete
GAAGTTATCAGTCGACATGGAAGATAACAAGGAGCTGCAATGCTTAATAT
GCAAATATTCGGACACTGACGACCTGGTCTTTGGCGAATGGATGATTGTA
CGCAATTTGCAGGTGCACTATTTTTGCCTGCTACTCTCAACGCATTTGCC
GCAGCGCGGCGGAGATAGCAGTGGAATCCTGGGATTTCTGCTTCGCGATA
TCCGCGAGGAGGCAGCCGCCGCGGAGAAGAGGAAATGTTGGTACTGCAAT
AAGATTGGGGCCAGTTTGCAATGCGATCGTTGCCGGTCATTGTTTCACCT
GAAGTGCGGCCTGGAGAATCGCGCCGTTTTCGAGTTCTGCGGCCAATACA
AAAGCTACTGCTACAAATGCAGGCCGATGGATGACTACAAGCGACAGCTG
CAGTCGAATCCGCCGAGGAACGCCACTTGCCCCATCTGCTTCAGTTCCAT
CTATAAGGTAGAGCTGCATTGCGTTGTGTACGGTGACTGCTGCCGCCTCG
GATTCGCCCATAAGAAATGCATGCGTCAGTACGCTCTGACCTCCGGATAT
TACTTGCGTTGCATTTGGTGTCGTTCGGAACGTTTCAGGGATTCCATACG
CCTGCAGTCGGTATTCGTGCCCGATCGCGATGCCACGTGGGAGAAGCAAC
GGAACGCCTATAGGGAGCTCCACGAGCGCAATCTGAAATGCGACCAGCCC
AACTGCCTGTGCCCCAGTGGTAGAACTTATAATAGATTATCGTGGGTGAT
ACTATGCTGCAGTTCTTGTGCCGCCACTTCGGCTCATCTTAAATGCTTGG
TGGGCGCCCTGCGACTGCCGAAGAAGCGCGAGCGTACAGATTTCAAGTGC
TCTATGTGCCTGGACGTGGAGAGGAGGATTGCTGAAGGACCGGCTCGCAC
AACAGAAGAAACCAATGCTGACGGCGACAACCAGGTGGATGGCTCTTTTT
ATGTGCAAAAATTGGGACCCGATGCTGCAACTCGATCCTTAACCCAGACT
CCTGTTTTCTCCGAAGAAGACGAAAGCGAACGAAGTAGTAATATCACGGT
TATATTCAGCCAACCGAAATCTAACGCAACAAGCGAGAGGTTATCCTTAT
CGCCGCCACAGGAGGAGATGATAGTGGAAATTCCTGATTCGCCAGAGGCG
TCGCCAAAGACGTCCATCGATGAGAACCACTCGCCGCAGCCAATAGCAAG
AAGGGACACATCCGACTCACCACAGCCAATAGCAGCAAGTGAGATCCCCG
ACTCACCGCAGCCAACAGCAGCAAGTGAGATCCCCGACTTACCGCAGACA
ACAGCAATAAACGTAAACCCTGAATTAACGCAGCAAACAGCATTAAACAC
GATTCCACACTCACCGCAGCCAGAAGCCAGCTTCTCAACGCAGCTAGTAT
CACAAACTTTCGATTGTCCACAGCCGCAGGAACAAGCTGTGGCGAAAGCT
CCCAACTCACCGTCACTGCCGAAAGAGGATCCAAATACTTTACTTGTGCT
AAAATCGGGCTTTCAATGCCCTGGCGAACCATTTTTCTACTTGGTTATCT
ACGAATTTGAGCACGGCACATGCATGGGTGAGTGCATTGGTACGTGTGTG
CTGCGATTTAAAGAGGATGACCCGCGCATTCAGGACACCTCGCAGGCAGC
TTTGGAACGCGTCAACATAACACCAGACGATGTATGGTGCCGCAGCGAGG
ACCGCGGCATCTTTGAGCATATCGAGAAGTTCCACGAATGGTACAGATCA
GAGGGGTTCTCTTAAAAGCTTTCTAGACCAT
BS30625.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:57:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pie-RB | 1749 | CG5354-PB | 1..1749 | 17..1765 | 8745 | 100 | Plus |
| pie-RA | 1749 | CG5354-PA | 1..1749 | 17..1765 | 8745 | 100 | Plus |
| pie-RB | 1749 | CG5354-PB | 1163..1296 | 1215..1348 | 280 | 80.6 | Plus |
| pie-RB | 1749 | CG5354-PB | 1199..1332 | 1179..1312 | 280 | 80.6 | Plus |
| pie-RA | 1749 | CG5354-PA | 1163..1296 | 1215..1348 | 280 | 80.6 | Plus |
| pie-RA | 1749 | CG5354-PA | 1199..1332 | 1179..1312 | 280 | 80.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:57:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pie-RB | 2089 | CG5354-RB | 138..1887 | 17..1766 | 8750 | 100 | Plus |
| pie-RA | 2003 | CG5354-RA | 138..1887 | 17..1766 | 8750 | 100 | Plus |
| pie-RB | 2089 | CG5354-RB | 1300..1433 | 1215..1348 | 280 | 80.6 | Plus |
| pie-RB | 2089 | CG5354-RB | 1336..1469 | 1179..1312 | 280 | 80.6 | Plus |
| pie-RA | 2003 | CG5354-RA | 1300..1433 | 1215..1348 | 280 | 80.6 | Plus |
| pie-RA | 2003 | CG5354-RA | 1336..1469 | 1179..1312 | 280 | 80.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:57:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10420827..10422463 | 1766..130 | 8185 | 100 | Minus |
| 2L | 23513712 | 2L | 10422530..10422643 | 130..17 | 570 | 100 | Minus |
| 2L | 23513712 | 2L | 10421245..10421378 | 1312..1179 | 280 | 80.6 | Minus |
| 2L | 23513712 | 2L | 10421281..10421414 | 1348..1215 | 280 | 80.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:57:13 has no hits.
BS30625.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 10:23:17 Download gff for
BS30625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pie-RA | 139..1885 | 17..1763 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:43 Download gff for
BS30625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pie-RA | 138..1884 | 17..1763 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:54:10 Download gff for
BS30625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pie-RA | 138..1884 | 17..1763 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:54:10 Download gff for
BS30625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10420830..10422462 | 131..1763 | 100 | <- | Minus |
| 2L | 10422530..10422643 | 17..130 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:43 Download gff for
BS30625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10420830..10422462 | 131..1763 | 100 | <- | Minus |
| arm_2L | 10422530..10422643 | 17..130 | 100 | | Minus |
BS30625.pep Sequence
Translation from 16 to 1764
> BS30625.pep
MEDNKELQCLICKYSDTDDLVFGEWMIVRNLQVHYFCLLLSTHLPQRGGD
SSGILGFLLRDIREEAAAAEKRKCWYCNKIGASLQCDRCRSLFHLKCGLE
NRAVFEFCGQYKSYCYKCRPMDDYKRQLQSNPPRNATCPICFSSIYKVEL
HCVVYGDCCRLGFAHKKCMRQYALTSGYYLRCIWCRSERFRDSIRLQSVF
VPDRDATWEKQRNAYRELHERNLKCDQPNCLCPSGRTYNRLSWVILCCSS
CAATSAHLKCLVGALRLPKKRERTDFKCSMCLDVERRIAEGPARTTEETN
ADGDNQVDGSFYVQKLGPDAATRSLTQTPVFSEEDESERSSNITVIFSQP
KSNATSERLSLSPPQEEMIVEIPDSPEASPKTSIDENHSPQPIARRDTSD
SPQPIAASEIPDSPQPTAASEIPDLPQTTAINVNPELTQQTALNTIPHSP
QPEASFSTQLVSQTFDCPQPQEQAVAKAPNSPSLPKEDPNTLLVLKSGFQ
CPGEPFFYLVIYEFEHGTCMGECIGTCVLRFKEDDPRIQDTSQAALERVN
ITPDDVWCRSEDRGIFEHIEKFHEWYRSEGFS*
BS30625.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pie-PB | 582 | CG5354-PB | 1..582 | 1..582 | 3161 | 100 | Plus |
| pie-PA | 582 | CG5354-PA | 1..582 | 1..582 | 3161 | 100 | Plus |
| Phf7-PC | 520 | CG9576-PC | 5..358 | 9..360 | 421 | 28.8 | Plus |
| Phf7-PB | 520 | CG9576-PB | 5..358 | 9..360 | 421 | 28.8 | Plus |
| Phf7-PA | 520 | CG9576-PA | 5..358 | 9..360 | 421 | 28.8 | Plus |
