Clone BS30906 Report

Search the DGRC for BS30906

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:309
Well:6
Vector:pDNR-Dual
Associated Gene/TranscriptCG15717-RA
Protein status:BS30906.pep: full length peptide match
Sequenced Size:791

Clone Sequence Records

BS30906.complete Sequence

791 bp assembled on 2012-07-12

GenBank Submission: KX805816

> BS30906.complete
GAAGTTATCAGTCGACATGGCCAGCAACTTCACCCAGTCCCAGCCGTCCA
GGATCACCAGCTACATGGTCAACCAGCTGCAGCCGACGGCGCAGGAAACG
AAGTTGGCGCTGATTCCCAGTGCACCCCAGTGGCGCTCCCCCCAGCTGAT
GGTCGTCTTCGAGGACGGTGATCTGCACTCAGCGCGCCACCAGTTGCTCC
AGTCCCTGCAGAATCCCTTTGCCGAGGGATCGGTGGCCACGTTGCTACTC
CAGGAGAGCATTGCCGATCAGTTTGTGGGCCTAGTGGCGCAGGATTTGCG
TCCGTTGTCGCAGGAGGTGTCCAAGCATCCGAGCTACACCAGCACGCTGG
CCAAGATCGAAGAGCTGAAGGCCAAGACAGTACAAGGCGAAAGCCTTAAG
GCTGGGGAATCACCCGTCTTGGTGTACGACTGCGTGCACAGCTATCTGGG
CAATGGAGCGACGGGAGTGGTGACGGTGCACACATTCCGCACAGCCAAGG
AGGCCGGCCAGTTGGCCAAAAGGGATCCCCTACCTTACGGCCAAGTTAGT
CTGTGGAATGAGAAGCTGGGCTGCGCCTACGAACTGATACCACGACTACC
GAGCGATATTGTGGCCATTAATTGCTTCAATCCGGACTTGGATCCCATCT
GGGAATCCTTTGCTGCCGACCGCAACGATGTTCTGCTGGCCAAGAACTAT
CACTATGAATCGCTGGTGGTGAGCGGCAAACGGAGGATCGTCGTCTTTCC
CGTGGGCACCATCTTCGGCAACTGAAAGCTTTCTAGACCAT

BS30906.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:42:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG15717-RE 759 CG15717-PE 1..759 17..775 3795 100 Plus
CG15717-RC 759 CG15717-PC 1..759 17..775 3795 100 Plus
CG15717-RA 759 CG15717-PA 1..759 17..775 3795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:42:21
Subject Length Description Subject Range Query Range Score Percent Strand
MFS10-RC 3329 CG4330-RC 84..844 16..776 3805 100 Plus
CG15717-RE 1150 CG15717-RE 78..838 16..776 3805 100 Plus
CG15717-RC 3329 CG15717-RC 84..844 16..776 3805 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:42:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13129304..13129978 102..776 3375 100 Plus
X 23542271 X 13129101..13129188 16..103 440 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:42:19 has no hits.

BS30906.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-12 11:17:58 Download gff for BS30906.complete
Subject Subject Range Query Range Percent Splice Strand
CG15717-RA 83..840 17..774 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:23 Download gff for BS30906.complete
Subject Subject Range Query Range Percent Splice Strand
CG15717-RA 85..842 17..774 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:49:40 Download gff for BS30906.complete
Subject Subject Range Query Range Percent Splice Strand
CG15717-RC 85..842 17..774 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:49:40 Download gff for BS30906.complete
Subject Subject Range Query Range Percent Splice Strand
X 13129102..13129188 17..103 100 -> Plus
X 13129306..13129976 104..774 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:23 Download gff for BS30906.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13023135..13023221 17..103 100 -> Plus
arm_X 13023339..13024009 104..774 100   Plus

BS30906.pep Sequence

Translation from 16 to 774

> BS30906.pep
MASNFTQSQPSRITSYMVNQLQPTAQETKLALIPSAPQWRSPQLMVVFED
GDLHSARHQLLQSLQNPFAEGSVATLLLQESIADQFVGLVAQDLRPLSQE
VSKHPSYTSTLAKIEELKAKTVQGESLKAGESPVLVYDCVHSYLGNGATG
VVTVHTFRTAKEAGQLAKRDPLPYGQVSLWNEKLGCAYELIPRLPSDIVA
INCFNPDLDPIWESFAADRNDVLLAKNYHYESLVVSGKRRIVVFPVGTIF
GN*

BS30906.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:08:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG15717-PE 252 CG15717-PE 1..252 1..252 1296 100 Plus
CG15717-PC 252 CG15717-PC 1..252 1..252 1296 100 Plus
CG15717-PA 252 CG15717-PA 1..252 1..252 1296 100 Plus
CG2336-PA 322 CG2336-PA 97..311 38..250 531 48.8 Plus
CG12516-PB 300 CG12516-PB 73..300 22..252 500 41.3 Plus