BS30906.complete Sequence
791 bp assembled on 2012-07-12
GenBank Submission: KX805816
> BS30906.complete
GAAGTTATCAGTCGACATGGCCAGCAACTTCACCCAGTCCCAGCCGTCCA
GGATCACCAGCTACATGGTCAACCAGCTGCAGCCGACGGCGCAGGAAACG
AAGTTGGCGCTGATTCCCAGTGCACCCCAGTGGCGCTCCCCCCAGCTGAT
GGTCGTCTTCGAGGACGGTGATCTGCACTCAGCGCGCCACCAGTTGCTCC
AGTCCCTGCAGAATCCCTTTGCCGAGGGATCGGTGGCCACGTTGCTACTC
CAGGAGAGCATTGCCGATCAGTTTGTGGGCCTAGTGGCGCAGGATTTGCG
TCCGTTGTCGCAGGAGGTGTCCAAGCATCCGAGCTACACCAGCACGCTGG
CCAAGATCGAAGAGCTGAAGGCCAAGACAGTACAAGGCGAAAGCCTTAAG
GCTGGGGAATCACCCGTCTTGGTGTACGACTGCGTGCACAGCTATCTGGG
CAATGGAGCGACGGGAGTGGTGACGGTGCACACATTCCGCACAGCCAAGG
AGGCCGGCCAGTTGGCCAAAAGGGATCCCCTACCTTACGGCCAAGTTAGT
CTGTGGAATGAGAAGCTGGGCTGCGCCTACGAACTGATACCACGACTACC
GAGCGATATTGTGGCCATTAATTGCTTCAATCCGGACTTGGATCCCATCT
GGGAATCCTTTGCTGCCGACCGCAACGATGTTCTGCTGGCCAAGAACTAT
CACTATGAATCGCTGGTGGTGAGCGGCAAACGGAGGATCGTCGTCTTTCC
CGTGGGCACCATCTTCGGCAACTGAAAGCTTTCTAGACCAT
BS30906.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:42:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15717-RE | 759 | CG15717-PE | 1..759 | 17..775 | 3795 | 100 | Plus |
CG15717-RC | 759 | CG15717-PC | 1..759 | 17..775 | 3795 | 100 | Plus |
CG15717-RA | 759 | CG15717-PA | 1..759 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:42:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MFS10-RC | 3329 | CG4330-RC | 84..844 | 16..776 | 3805 | 100 | Plus |
CG15717-RE | 1150 | CG15717-RE | 78..838 | 16..776 | 3805 | 100 | Plus |
CG15717-RC | 3329 | CG15717-RC | 84..844 | 16..776 | 3805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:42:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13129304..13129978 | 102..776 | 3375 | 100 | Plus |
X | 23542271 | X | 13129101..13129188 | 16..103 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:42:19 has no hits.
BS30906.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-12 11:17:58 Download gff for
BS30906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15717-RA | 83..840 | 17..774 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:23 Download gff for
BS30906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15717-RA | 85..842 | 17..774 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:49:40 Download gff for
BS30906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15717-RC | 85..842 | 17..774 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:49:40 Download gff for
BS30906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13129102..13129188 | 17..103 | 100 | -> | Plus |
X | 13129306..13129976 | 104..774 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:23 Download gff for
BS30906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13023135..13023221 | 17..103 | 100 | -> | Plus |
arm_X | 13023339..13024009 | 104..774 | 100 | | Plus |
BS30906.pep Sequence
Translation from 16 to 774
> BS30906.pep
MASNFTQSQPSRITSYMVNQLQPTAQETKLALIPSAPQWRSPQLMVVFED
GDLHSARHQLLQSLQNPFAEGSVATLLLQESIADQFVGLVAQDLRPLSQE
VSKHPSYTSTLAKIEELKAKTVQGESLKAGESPVLVYDCVHSYLGNGATG
VVTVHTFRTAKEAGQLAKRDPLPYGQVSLWNEKLGCAYELIPRLPSDIVA
INCFNPDLDPIWESFAADRNDVLLAKNYHYESLVVSGKRRIVVFPVGTIF
GN*
BS30906.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:08:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15717-PE | 252 | CG15717-PE | 1..252 | 1..252 | 1296 | 100 | Plus |
CG15717-PC | 252 | CG15717-PC | 1..252 | 1..252 | 1296 | 100 | Plus |
CG15717-PA | 252 | CG15717-PA | 1..252 | 1..252 | 1296 | 100 | Plus |
CG2336-PA | 322 | CG2336-PA | 97..311 | 38..250 | 531 | 48.8 | Plus |
CG12516-PB | 300 | CG12516-PB | 73..300 | 22..252 | 500 | 41.3 | Plus |