BS30965.complete Sequence
3686 bp assembled on 2012-09-12
GenBank Submission: KX802183
> BS30965.complete
GAAGTTATCAGTCGACATGCACTTTCCAATTACCACCCCAGAGAACAAGA
AAGGAGGACAGGATAGCGCTGCAGCACCACAGCCCCAGCAGCAGCAAAAG
CAACAACAACAACGGCAGCAACAACCACAGCAGCTGCAACAACCACAGCA
GCTGCAACAACCACAGCAGCTGCAACAACCACAGCAGCAGCAACAACAAC
AACCGCATCAGCAACAACAACAAAGTTCGAGACAACAGCCATCCACAAGC
TCAGGCGGATCCCGTGCATCTGGGTTCCAGCAAGGAGGCCAACAGCAAAA
ATCCCAAGACGCAGAAGGATGGACTGCACAGAAAAAACAAGGCAAACAGC
AGGTACAAGGGTGGACTAAACAAGGTCAACAAGGTGGCCATCAGCAAGGA
CGACAAGGGCAAGACGGTGGCTACCAACAGCGTCCGCCTGGACAACAACA
AGGTGGCCATCAGCAAGGACGACAAGGGCAAGAAGGTGGCTACCAACAGC
GTCCGCCTGGACAACAACAAGGTGGCCATCAGCAAGGACGACAAGGGCAA
GAAGGTGGCTACCAACAGCGTCCGTCTGGACAACAACAAGGTGGCCATCA
GCAAGGACGACAAGGGCAAGAAGGTGGCTACCAACAGCGTCCGCCTGGAC
AACAACAAGGTGGCCATCAGCAAGGACGACAAGGGCAAGAAGGTGGCTAC
CAACAGCGTCCGTCTGGACAACAACAAGGTGGCCATCAGCAAGGACGACA
AGGGCAAGAAGGTGGCTACCAACAGCGTCCGCCTGGACAACAACAAGGTG
GCCATCAGCAAGGACGACAAGGGCAAGAAGGTGGCTACCAACAGCGTCCG
CCTGGACAACAACAAGGTGGCCATGAGCAAGGACGACAAGGGCAAGAAGG
TGGCTACCAACAGCGTCCGTCTGGACAACAACAAGGTGGCCATCAGCAAG
GACGACAAGGGCAAGAAGGTGGCTACCAACAGCGTCCGTCTGGACAACAA
CAAGGTGGCCATCAGCAAGGACGACAAGGGCAAGAAGGTGGCTACCAACA
GCGTCCGTCTGGACAACAACAAGGTGGCCATCAGCAAGGACGACAAGGGC
AAGAAGGTGGCTACCAACAGCGTCCGCCTGGACAACAACCAAACCAAACC
CAGAGCCAAGGCCAATACCAATCTCGTGGACCACCTCAGCAACAGCAGGC
TGCCCCATTACCATTACCGCCTCAGCCAGCCGGGAGCATTAAGCGCGGAA
CAATCGGCAAACCCGGGCAAGTAGGCATCAACTATCTGGACCTTGACCTG
TCCAAAATGCCTTCTGTGGCATACCACTATGACGTGAAGATCATGCCAGA
GCGTCCCAAAAAGTTTTACAGACAGGCATTTGAACAATTTCGGGTGGACC
AATTGGGCGGAGCAGTTCTTGCCTATGATGGCAAAGCCTCTTGCTACTCG
GTGGATAAGCTGCCGTTAAATAGCCAAAATCCGGAAGTGACTGTGACAGA
TCGTAATGGTCGTACTTTGCGCTACACGATCGAAATCAAGGAGACTGGTG
ACTCGACCATTGACCTTAAATCGTTAACTACTTATATGAATGACCGAATT
TTCGACAAGCCCATGCGAGCAATGCAGTGCGTGGAGGTTGTTTTGGCTTC
ACCCTGCCACAACAAAGCCATCCGTGTCGGTCGTTCCTTCTTTAAGATGT
CCGATCCTAATAATCGTCACGAACTGGATGATGGATACGAGGCCCTGGTC
GGTCTGTATCAGGCATTTATGCTGGGCGATAGGCCATTTTTAAATGTAGA
TATATCGCACAAATCCTTTCCGATTTCAATGCCGATGATCGAATATTTGG
AGCGATTTAGCTTAAAGGCTAAAATCAACAATACAACGAATTTAGATTAT
TCGCGACGCTTCCTTGAGCCATTCCTCAGAGGCATTAATGTGGTTTACAC
GCCTCCTCAGTCGTTTCAAAGCGCTCCAAGGGTATACCGTGTAAATGGTC
TTTCTCGTGCCCCGGCCAGCAGTGAGACCTTCGAACACGATGGGAAGAAG
GTCACCATTGCGTCCTACTTCCACAGTCGCAACTACCCATTGAAGTTTCC
CCAACTCCATTGTCTGAACGTTGGATCTTCAATCAAGAGTATTCTGCTGC
CCATCGAGCTATGCAGCATCGAGGAAGGTCAGGCCCTAAACCGCAAGGAT
GGAGCAACTCAGGTGGCCAATATGATAAAGTACGCAGCCACATCGACGAA
CGTGCGAAAGCGCAAGATTATGAACTTGCTGCAATACTTCCAGCACAACC
TGGATCCGACCATCAGTCGCTTTGGCATCCGCATTGCCAACGATTTTATT
GTGGTAAGCACCCGCGTCCTAAGCCCACCTCAGGTTGAATATCATAGTAA
GAGGTTTACTATGGTGAAGAACGGGTCGTGGCGCATGGATGGCATGAAGT
TTCTGGAGCCCAAGCCCAAGGCGCACAAGTGTGCGGTCTTGTATTGCGAT
CCGAGGAGTGGTCGCAAAATGAACTATACCCAGCTGAATGACTTCGGGAA
CCTAATAATATCCCAAGGCAAGGCAGTCAACATAAGCTTGGATTCTGATG
TGACATACAGACCGTTCACGGATGACGAACGCAGCCTAGACACTATTTTC
GCGGATCTGAAGCGCAGCCAGCACGATCTGGCAATTGTGATTATTCCTCA
GTTTAGAATTTCTTACGATACAATTAAGCAGAAGGCCGAGCTGCAGCATG
GAATTTTGACGCAATGCATTAAGCAGTTCACCGTGGAACGAAAGTGTAAT
AATCAGACGATTGGAAATATTCTACTTAAGATCAACTCCAAGCTGAACGG
CATCAACCACAAGATCAAGGATGATCCTCGTCTGCCGATGATGAAGAACA
CCATGTACATTGGAGCCGATGTGACCCATCCCTCTCCCGATCAGCGCGAG
ATTCCCAGTGTGGTCGGAGTAGCAGCCTCACACGATCCCTACGGAGCCAG
TTATAACATGCAATATCGTTTGCAGCGAGGGGCTCTGGAGGAGATTGAGG
ACATGTTCTCGATTACTTTGGAGCACTTGCGCGTGTATAAAGAGTACCGT
AACGCCTATCCTGATCATATCATCTACTACCGAGATGGCGTGAGCGACGG
CCAGTTTCCGAAAATCAAAAACGAGGAACTGAGGTGTATTAAACAAGCCT
GTGACAAGGTGGGCTGTAAACCCAAGATTTGCTGCGTGATTGTGGTGAAG
CGTCATCACACTCGCTTCTTTCCCAGCGGCGACGTAACGACATCGAACAA
GTTCAACAACGTGGACCCCGGAACCGTGGTCGATCGCACCATTGTGCATC
CTAACGAGATGCAGTTCTTCATGGTCAGCCACCAGGCCATCCAGGGCACG
GCCAAGCCAACACGATACAATGTGATTGAGAACACAGGCAATCTTGACAT
CGACTTGTTGCAGCAGTTGACCTACAACCTGTGCCACATGTTCCCTCGTT
GCAATCGCTCGGTTTCTTATCCGGCTCCGGCCTATTTAGCCCATTTGGTA
GCTGCTCGTGGACGCGTTTATCTGACTGGCACCAACAGGTTCCTGGATTT
GAAGAAGGAGTACGCAAAGCGAACGATTGTCCCCGAATTCATGAAGAAAA
ACCCCATGTACTTTGTCTGAAAGCTTTCTAGACCAT
BS30965.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:04:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AGO2-RC | 3654 | CG7439-PC | 1..3654 | 17..3670 | 18270 | 100 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 17..3645 | 42..3670 | 18145 | 100 | Plus |
| AGO2-RE | 2364 | CG7439-PE | 1..2364 | 1307..3670 | 11820 | 100 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 361..1054 | 446..1139 | 3335 | 98.7 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 430..1123 | 377..1070 | 3335 | 98.7 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 352..1045 | 446..1139 | 3335 | 98.7 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 421..1114 | 377..1070 | 3335 | 98.7 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 361..985 | 515..1139 | 3005 | 98.7 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 499..1123 | 377..1001 | 3005 | 98.7 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 352..976 | 515..1139 | 3005 | 98.7 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 490..1114 | 377..1001 | 3005 | 98.7 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 361..916 | 584..1139 | 2660 | 98.6 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 568..1123 | 377..932 | 2660 | 98.6 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 352..907 | 584..1139 | 2660 | 98.6 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 559..1114 | 377..932 | 2660 | 98.6 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 361..847 | 653..1139 | 2345 | 98.8 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 637..1123 | 377..863 | 2345 | 98.8 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 352..838 | 653..1139 | 2345 | 98.8 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 628..1114 | 377..863 | 2345 | 98.8 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 361..778 | 722..1139 | 2045 | 99.3 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 706..1123 | 377..794 | 2045 | 99.3 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 352..769 | 722..1139 | 2045 | 99.3 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 697..1114 | 377..794 | 2045 | 99.3 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 361..709 | 791..1139 | 1670 | 98.6 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 775..1123 | 377..725 | 1670 | 98.6 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 352..700 | 791..1139 | 1670 | 98.6 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 766..1114 | 377..725 | 1670 | 98.6 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 361..640 | 860..1139 | 1340 | 98.6 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 844..1123 | 377..656 | 1340 | 98.6 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 352..631 | 860..1139 | 1340 | 98.6 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 835..1114 | 377..656 | 1340 | 98.6 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 361..571 | 929..1139 | 995 | 98.1 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 913..1123 | 377..587 | 995 | 98.1 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 352..562 | 929..1139 | 995 | 98.1 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 904..1114 | 377..587 | 995 | 98.1 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 361..502 | 998..1139 | 680 | 98.6 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 982..1123 | 377..518 | 680 | 98.6 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 352..493 | 998..1139 | 680 | 98.6 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 973..1114 | 377..518 | 680 | 98.6 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 361..433 | 1067..1139 | 350 | 98.6 | Plus |
| AGO2-RC | 3654 | CG7439-PC | 1051..1123 | 377..449 | 350 | 98.6 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 352..424 | 1067..1139 | 350 | 98.6 | Plus |
| AGO2-RB | 3645 | CG7439-PB | 1042..1114 | 377..449 | 350 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:04:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AGO2-RC | 4117 | CG7439-RC | 153..3806 | 17..3670 | 18270 | 100 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 111..3739 | 42..3670 | 18145 | 100 | Plus |
| AGO2-RE | 3784 | CG7439-RE | 28..3473 | 225..3670 | 17230 | 100 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 513..1206 | 446..1139 | 3335 | 98.7 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 582..1275 | 377..1070 | 3335 | 98.7 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 446..1139 | 446..1139 | 3335 | 98.7 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 515..1208 | 377..1070 | 3335 | 98.7 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 513..1137 | 515..1139 | 3005 | 98.7 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 651..1275 | 377..1001 | 3005 | 98.7 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 446..1070 | 515..1139 | 3005 | 98.7 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 584..1208 | 377..1001 | 3005 | 98.7 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 513..1068 | 584..1139 | 2660 | 98.6 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 720..1275 | 377..932 | 2660 | 98.6 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 446..1001 | 584..1139 | 2660 | 98.6 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 653..1208 | 377..932 | 2660 | 98.6 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 513..999 | 653..1139 | 2345 | 98.8 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 789..1275 | 377..863 | 2345 | 98.8 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 446..932 | 653..1139 | 2345 | 98.8 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 722..1208 | 377..863 | 2345 | 98.8 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 513..930 | 722..1139 | 2045 | 99.3 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 858..1275 | 377..794 | 2045 | 99.3 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 446..863 | 722..1139 | 2045 | 99.3 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 791..1208 | 377..794 | 2045 | 99.3 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 513..861 | 791..1139 | 1670 | 98.6 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 927..1275 | 377..725 | 1670 | 98.6 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 446..794 | 791..1139 | 1670 | 98.6 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 860..1208 | 377..725 | 1670 | 98.6 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 513..792 | 860..1139 | 1340 | 98.6 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 996..1275 | 377..656 | 1340 | 98.6 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 446..725 | 860..1139 | 1340 | 98.6 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 929..1208 | 377..656 | 1340 | 98.6 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 513..723 | 929..1139 | 995 | 98.1 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 1065..1275 | 377..587 | 995 | 98.1 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 446..656 | 929..1139 | 995 | 98.1 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 998..1208 | 377..587 | 995 | 98.1 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 1134..1275 | 377..518 | 680 | 98.6 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 513..654 | 998..1139 | 680 | 98.6 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 446..587 | 998..1139 | 680 | 98.6 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 1067..1208 | 377..518 | 680 | 98.6 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 513..585 | 1067..1139 | 350 | 98.6 | Plus |
| AGO2-RC | 4117 | CG7439-RC | 1203..1275 | 377..449 | 350 | 98.6 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 446..518 | 1067..1139 | 350 | 98.6 | Plus |
| AGO2-RB | 4050 | CG7439-RB | 1136..1208 | 377..449 | 350 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:04:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15556850..15558119 | 225..1494 | 6350 | 100 | Plus |
| 3L | 28110227 | 3L | 15559100..15560118 | 2192..3210 | 5095 | 100 | Plus |
| 3L | 28110227 | 3L | 15557002..15557695 | 446..1139 | 3335 | 98.7 | Plus |
| 3L | 28110227 | 3L | 15557071..15557764 | 377..1070 | 3335 | 98.7 | Plus |
| 3L | 28110227 | 3L | 15558394..15559003 | 1582..2191 | 3050 | 100 | Plus |
| 3L | 28110227 | 3L | 15557002..15557626 | 515..1139 | 3005 | 98.7 | Plus |
| 3L | 28110227 | 3L | 15557140..15557764 | 377..1001 | 3005 | 98.7 | Plus |
| 3L | 28110227 | 3L | 15557002..15557557 | 584..1139 | 2660 | 98.6 | Plus |
| 3L | 28110227 | 3L | 15557209..15557764 | 377..932 | 2660 | 98.6 | Plus |
| 3L | 28110227 | 3L | 15557002..15557488 | 653..1139 | 2345 | 98.8 | Plus |
| 3L | 28110227 | 3L | 15557278..15557764 | 377..863 | 2345 | 98.8 | Plus |
| 3L | 28110227 | 3L | 15557002..15557419 | 722..1139 | 2045 | 99.3 | Plus |
| 3L | 28110227 | 3L | 15557347..15557764 | 377..794 | 2045 | 99.3 | Plus |
| 3L | 28110227 | 3L | 15560206..15560578 | 3207..3579 | 1865 | 100 | Plus |
| 3L | 28110227 | 3L | 15557002..15557350 | 791..1139 | 1670 | 98.6 | Plus |
| 3L | 28110227 | 3L | 15557416..15557764 | 377..725 | 1670 | 98.6 | Plus |
| 3L | 28110227 | 3L | 15557002..15557281 | 860..1139 | 1340 | 98.6 | Plus |
| 3L | 28110227 | 3L | 15557485..15557764 | 377..656 | 1340 | 98.6 | Plus |
| 3L | 28110227 | 3L | 15554265..15554474 | 17..226 | 1050 | 100 | Plus |
| 3L | 28110227 | 3L | 15557002..15557212 | 929..1139 | 995 | 98.1 | Plus |
| 3L | 28110227 | 3L | 15557554..15557764 | 377..587 | 995 | 98.1 | Plus |
| 3L | 28110227 | 3L | 15557002..15557143 | 998..1139 | 680 | 98.6 | Plus |
| 3L | 28110227 | 3L | 15557623..15557764 | 377..518 | 680 | 98.6 | Plus |
| 3L | 28110227 | 3L | 15560640..15560731 | 3579..3670 | 460 | 100 | Plus |
| 3L | 28110227 | 3L | 15558250..15558338 | 1493..1581 | 445 | 100 | Plus |
| 3L | 28110227 | 3L | 15557002..15557074 | 1067..1139 | 350 | 98.6 | Plus |
| 3L | 28110227 | 3L | 15557692..15557764 | 377..449 | 350 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:04:43 has no hits.
BS30965.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-12 10:03:44 Download gff for
BS30965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AGO2-RC | 91..3743 | 17..3669 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:43 Download gff for
BS30965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AGO2-RC | 153..3805 | 17..3669 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:20:46 Download gff for
BS30965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AGO2-RC | 153..3805 | 17..3669 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:20:46 Download gff for
BS30965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15554265..15554472 | 17..224 | 100 | -> | Plus |
| 3L | 15556850..15558117 | 225..1492 | 100 | -> | Plus |
| 3L | 15558250..15558338 | 1493..1581 | 100 | -> | Plus |
| 3L | 15558394..15559003 | 1582..2191 | 100 | -> | Plus |
| 3L | 15559100..15560116 | 2192..3208 | 100 | -> | Plus |
| 3L | 15560208..15560578 | 3209..3579 | 100 | -> | Plus |
| 3L | 15560641..15560730 | 3580..3669 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:43 Download gff for
BS30965.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15547365..15547572 | 17..224 | 100 | -> | Plus |
| arm_3L | 15549950..15551217 | 225..1492 | 100 | -> | Plus |
| arm_3L | 15551350..15551438 | 1493..1581 | 100 | -> | Plus |
| arm_3L | 15551494..15552103 | 1582..2191 | 100 | -> | Plus |
| arm_3L | 15552200..15553216 | 2192..3208 | 100 | -> | Plus |
| arm_3L | 15553308..15553678 | 3209..3579 | 100 | -> | Plus |
| arm_3L | 15553741..15553830 | 3580..3669 | 100 | | Plus |
BS30965.pep Sequence
Translation from 16 to 3669
> BS30965.pep
MHFPITTPENKKGGQDSAAAPQPQQQQKQQQQRQQQPQQLQQPQQLQQPQ
QLQQPQQQQQQQPHQQQQQSSRQQPSTSSGGSRASGFQQGGQQQKSQDAE
GWTAQKKQGKQQVQGWTKQGQQGGHQQGRQGQDGGYQQRPPGQQQGGHQQ
GRQGQEGGYQQRPPGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGRQG
QEGGYQQRPPGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGG
YQQRPPGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHEQGRQGQEGGYQQR
PSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQ
QQGGHQQGRQGQEGGYQQRPPGQQPNQTQSQGQYQSRGPPQQQQAAPLPL
PPQPAGSIKRGTIGKPGQVGINYLDLDLSKMPSVAYHYDVKIMPERPKKF
YRQAFEQFRVDQLGGAVLAYDGKASCYSVDKLPLNSQNPEVTVTDRNGRT
LRYTIEIKETGDSTIDLKSLTTYMNDRIFDKPMRAMQCVEVVLASPCHNK
AIRVGRSFFKMSDPNNRHELDDGYEALVGLYQAFMLGDRPFLNVDISHKS
FPISMPMIEYLERFSLKAKINNTTNLDYSRRFLEPFLRGINVVYTPPQSF
QSAPRVYRVNGLSRAPASSETFEHDGKKVTIASYFHSRNYPLKFPQLHCL
NVGSSIKSILLPIELCSIEEGQALNRKDGATQVANMIKYAATSTNVRKRK
IMNLLQYFQHNLDPTISRFGIRIANDFIVVSTRVLSPPQVEYHSKRFTMV
KNGSWRMDGMKFLEPKPKAHKCAVLYCDPRSGRKMNYTQLNDFGNLIISQ
GKAVNISLDSDVTYRPFTDDERSLDTIFADLKRSQHDLAIVIIPQFRISY
DTIKQKAELQHGILTQCIKQFTVERKCNNQTIGNILLKINSKLNGINHKI
KDDPRLPMMKNTMYIGADVTHPSPDQREIPSVVGVAASHDPYGASYNMQY
RLQRGALEEIEDMFSITLEHLRVYKEYRNAYPDHIIYYRDGVSDGQFPKI
KNEELRCIKQACDKVGCKPKICCVIVVKRHHTRFFPSGDVTTSNKFNNVD
PGTVVDRTIVHPNEMQFFMVSHQAIQGTAKPTRYNVIENTGNLDIDLLQQ
LTYNLCHMFPRCNRSVSYPAPAYLAHLVAARGRVYLTGTNRFLDLKKEYA
KRTIVPEFMKKNPMYFV*
BS30965.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:30:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AGO2-PC | 1217 | CG7439-PC | 1..1217 | 1..1217 | 6513 | 100 | Plus |
| AGO2-PB | 1214 | CG7439-PB | 6..1214 | 9..1217 | 6462 | 99.9 | Plus |
| AGO2-PE | 787 | CG7439-PE | 1..787 | 431..1217 | 4150 | 100 | Plus |
| AGO2-PB | 1214 | CG7439-PB | 100..390 | 7..329 | 1087 | 68.1 | Plus |
| AGO1-PB | 950 | CG6671-PB | 83..908 | 390..1186 | 903 | 31.9 | Plus |
| AGO1-PD | 984 | CG6671-PD | 117..942 | 390..1186 | 903 | 31.9 | Plus |
