BS30972.complete Sequence
692 bp assembled on 2012-07-12
GenBank Submission: KX804152
> BS30972.complete
GAAGTTATCAGTCGACATGATTATATATGGCGTCTATATAGTTAGTAAAT
CGGGTGGCCTTATATTCAACCTGGACAACAATGTGCCACGCATTGAGCAC
GAGAAGACCTTTACATACCCTCTGGACTTGGTGCTGGACTACGATTCCAA
GAAGGTATCGGTCTCGTTCAACAGAAAGGATGGAATAAATGTGGGCCATG
TCCTGGTGGCGGTCAACGGTATGCCCGTCAATGGAGTCACCCTGGATGAT
GGACGCGATGTGAGGACGACACTGGATGCACCGGAGAACTATCCCATTAA
CCTGAAGTTCAGCCGGCCAAAGATGACCACCAACGAGAAAATCTTTCTGG
CCAGCATGTTCTACCCGCTGTTCGCCATCGCCAGCCAACTGAGTCCGGAG
CCCAAGAGTTCCGGCATCGAGATCCTAGAGGCGGACACTTTCACGCTGCA
CTGCTTCCAAACGCTGACCGGAATCAAGTTCATTATAATCTCGGAAACGG
GTCTCAATGGCATTGATCTGCTGCTGCGAAAGGTTTACGAGCTGTACTCA
GACTACGTGCTCAAGAACCCCTTCTACTCCCTGGAGATGCCCATTCGATG
CGAGCTCTTCGACAACAAGCTCCAAGAGCTCCTCGCCCAGGTCGAGAAGA
CGGGCATTAGCAATATCGATAAATAAAAGCTTTCTAGACCAT
BS30972.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:42:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trs23-RA | 660 | CG9298-PA | 1..660 | 17..676 | 3300 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:42:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trs23-RA | 765 | CG9298-RA | 88..748 | 17..677 | 3305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:42:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8686549..8687035 | 191..677 | 2435 | 100 | Plus |
2L | 23513712 | 2L | 8686318..8686492 | 17..191 | 875 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:42:34 has no hits.
BS30972.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-12 11:18:00 Download gff for
BS30972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trs23-RA | 88..739 | 17..668 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:29 Download gff for
BS30972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trs23-RA | 88..739 | 17..668 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:49:46 Download gff for
BS30972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trs23-RA | 88..739 | 17..668 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:49:46 Download gff for
BS30972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8686318..8686492 | 17..191 | 100 | -> | Plus |
2L | 8686550..8687026 | 192..668 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:29 Download gff for
BS30972.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8686318..8686492 | 17..191 | 100 | -> | Plus |
arm_2L | 8686550..8687026 | 192..668 | 100 | | Plus |
BS30972.pep Sequence
Translation from 16 to 675
> BS30972.pep
MIIYGVYIVSKSGGLIFNLDNNVPRIEHEKTFTYPLDLVLDYDSKKVSVS
FNRKDGINVGHVLVAVNGMPVNGVTLDDGRDVRTTLDAPENYPINLKFSR
PKMTTNEKIFLASMFYPLFAIASQLSPEPKSSGIEILEADTFTLHCFQTL
TGIKFIIISETGLNGIDLLLRKVYELYSDYVLKNPFYSLEMPIRCELFDN
KLQELLAQVEKTGISNIDK*
BS30972.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:08:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trs23-PA | 219 | CG9298-PA | 1..219 | 1..219 | 1124 | 100 | Plus |