BS31026.complete Sequence
2207 bp assembled on 2012-09-25
GenBank Submission: KX805052
> BS31026.complete
GAAGTTATCAGTCGACATGGCTGCCGGGCAATGGGTGGGGGTGGTTGAGC
GGGTGCTCCGGGGAATGGTGCTGAAATGGGGGGCCAATTTGGCTGTCCTG
GGGCTGTGCGTGTTTCTCTTTGCCAGCGCCACGCACGCGAACTCCCTGAA
CGCCATCGAGGAGCCCGTCACCCGGCGACACCACCAGCGGCATCACGAGC
GCGAGCGGGAGGAGAACGGCTACTGCGCCCCGTACAGCGGCAAGGTGTGC
AAGGAATACCTCACCGGCCAGGTGTGGTACAGTCTGGAGGATCCCACTGG
CGGGTGGAAGAACGAGCAGGTGACCACGGCGCTCTGGGACGAGCTTATCT
CCGATCTTACGGGTCTGTGTCGCGAAGCAGCCGAGAAAATGCTCTGCGCC
TATGCGTTTCCCAACTGCCACATGGAGGGCGGTCGAGCGGTGAAGGCTCC
TCTCTGCTTCGAGGATTGCCAGGCCACGCATCTCCAGTTCTGCTACAACG
ACTGGGTGCTCATCGAGGAGAAGAAGGAGCGAAATATGTTCATCAAGAGC
CGCGGCCACTTCCGGCTACCCAACTGCTCCTCCTTGCCGCACTACAACGC
TTCCATGCGGCGACCCAACTGCTCCTACATCGGTCTCACCGAACTCAAGG
AGTCCGAAGTGAGCTACGATTGCCGCAATGGAAACGGACGCTTCTACATG
GGCACAATGAACGTGTCCAAGTCGGGCATTCCCTGCCAGCGCTGGGACAC
TCAGTACCCGCACAAGCACTTCCAGCCACCACTGGTCTTCCATCAGCTCC
TGGAGGGCGAAAACTACTGCCGGAATGCTGGCGGTGAGGAGCCGCATCCC
TGGTGCTACACTGTGGATGAATCAGTGCGCTGGCAGCACTGCGATATACC
CATGTGTCCGGATTATGTGGACCCCAATGCTGTCGATTTGAACACGCCCA
TCAAGATGGAGAAGTTCTTCACGCCATCGATGATCTTTCTCTTGGCTGGA
ATAGGTTTCGTGGCCATTGTGACCCTGCACTTGATGATATTGCTAGTCTA
TAAGTTGTCCAAGCACAAGGATTACTCTCAGCCCGCGGGAGCAGCCACTG
CCGAATGCAGTGTTTCCATGCGTGGAGGAGGAGATTGTGGCGGCAATCTG
AACACCAGTAGAGAAACCCTCGGAGGCAATGGAAACACGAACACCTTGGC
AAAATGGGGCACCATCAGGAGCACGGCCACAATACACAGCAATTGCGTGG
CCCTTACTACGGTGACCAATGTGTCTGATGCGAAGGGCACGAAACCGAAT
GCACGCCTGGAGAAGTTGGAGTACCCACGCGGGGATATAGTGTATGTGAG
ATCATTGGGTCAAGGAGCCTTCGGTCGCGTCTTCCAGGCCAGGGCTCCTG
GACTTGTTCCCGATCAGGAAGATCTACTAGTCGCTGTTAAGATGCTAAAG
GACGACGCCAGCGACCAGATGCAGATGGATTTCGAGCGCGAGGCCTGTTT
GCTGGCCGAGTTCGATCATCCCAATATCGTGAGGCTGCTGGGGGTGTGCG
CCTTGGGCAGACCCATGTGCCTGCTCTTCGAGTACATGGCTCCTGGCGAT
CTAAGCGAGTTCTTGCGCGCCTGCTCCCCATATGCCACACACCAGGCGCC
GACACAGGATCGTCTGCAGTTGAACGAGCTACATCTGCTGCAGATGGCGG
CCAACATTGCAGCGGGCATGCTGTATCTTTCGGAGAGAAAATTCGTCCAC
CGGGATTTGGCCACCAGGAATTGCCTGATCAACGAGCACATGGCGGTAAA
GATCGCCGACTTTGGGCTCTCGCACAAGATCTATTTGCAGGACTATTACA
AAGGCGATGAGAACGACTTCATCCCGATCCGCTGGATGCCACTTGAGAGC
ATACTGTACAACAAGTTCTCGCTTGAGTCGGATGTGTGGGCATACGGCAT
CTGTCTGTGGGAGGTCTTCTCCTTCGCCTTGCAGCCCTACTTTGGGTTAA
CCCACGAGGAGGTGATCAAATACATCAAGGAGGGCAACGTACTCGGCTGT
CCGGACAACACGCCGCTCTCCGTCTACGCGCTGATGCGTCGCTGCTGGAA
CCGCAAGCCCAGTGAGCGACCTGGCTTCGCCGAGATCAACCACTGCATCC
AGCACAGCATCGCCGAGAGCGAGTGCAAGGCAATGCTCTAGAAGCTTTCT
AGACCAT
BS31026.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:07:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nrk-RA | 2175 | CG4007-PA | 1..2175 | 17..2191 | 10860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:07:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nrk-RA | 3235 | CG4007-RA | 226..2401 | 16..2191 | 10865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:07:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13161368..13162650 | 909..2191 | 6400 | 99.9 | Plus |
| 2R | 25286936 | 2R | 13160288..13160657 | 16..385 | 1850 | 100 | Plus |
| 2R | 25286936 | 2R | 13160718..13160999 | 384..665 | 1410 | 100 | Plus |
| 2R | 25286936 | 2R | 13161066..13161308 | 666..908 | 1215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:07:16 has no hits.
BS31026.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-25 10:32:16 Download gff for
BS31026.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nrk-RA | 241..2415 | 17..2191 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:16 Download gff for
BS31026.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nrk-RA | 227..2401 | 17..2191 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:57:30 Download gff for
BS31026.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nrk-RA | 227..2401 | 17..2191 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:57:30 Download gff for
BS31026.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13160289..13160657 | 17..385 | 100 | -> | Plus |
| 2R | 13160720..13160999 | 386..665 | 100 | -> | Plus |
| 2R | 13161066..13161308 | 666..908 | 100 | -> | Plus |
| 2R | 13161368..13162650 | 909..2191 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:16 Download gff for
BS31026.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9048225..9048504 | 386..665 | 100 | -> | Plus |
| arm_2R | 9048571..9048813 | 666..908 | 100 | -> | Plus |
| arm_2R | 9047794..9048162 | 17..385 | 100 | -> | Plus |
| arm_2R | 9048873..9050155 | 909..2191 | 99 | | Plus |
BS31026.pep Sequence
Translation from 16 to 2190
> BS31026.pep
MAAGQWVGVVERVLRGMVLKWGANLAVLGLCVFLFASATHANSLNAIEEP
VTRRHHQRHHEREREENGYCAPYSGKVCKEYLTGQVWYSLEDPTGGWKNE
QVTTALWDELISDLTGLCREAAEKMLCAYAFPNCHMEGGRAVKAPLCFED
CQATHLQFCYNDWVLIEEKKERNMFIKSRGHFRLPNCSSLPHYNASMRRP
NCSYIGLTELKESEVSYDCRNGNGRFYMGTMNVSKSGIPCQRWDTQYPHK
HFQPPLVFHQLLEGENYCRNAGGEEPHPWCYTVDESVRWQHCDIPMCPDY
VDPNAVDLNTPIKMEKFFTPSMIFLLAGIGFVAIVTLHLMILLVYKLSKH
KDYSQPAGAATAECSVSMRGGGDCGGNLNTSRETLGGNGNTNTLAKWGTI
RSTATIHSNCVALTTVTNVSDAKGTKPNARLEKLEYPRGDIVYVRSLGQG
AFGRVFQARAPGLVPDQEDLLVAVKMLKDDASDQMQMDFEREACLLAEFD
HPNIVRLLGVCALGRPMCLLFEYMAPGDLSEFLRACSPYATHQAPTQDRL
QLNELHLLQMAANIAAGMLYLSERKFVHRDLATRNCLINEHMAVKIADFG
LSHKIYLQDYYKGDENDFIPIRWMPLESILYNKFSLESDVWAYGICLWEV
FSFALQPYFGLTHEEVIKYIKEGNVLGCPDNTPLSVYALMRRCWNRKPSE
RPGFAEINHCIQHSIAESECKAML*
BS31026.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:46:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nrk-PA | 724 | CG4007-PA | 1..724 | 1..724 | 3942 | 100 | Plus |
| Ror-PA | 685 | CG4926-PA | 179..668 | 146..709 | 812 | 34.7 | Plus |
| InR-PD | 2144 | CG18402-PD | 1365..1660 | 435..721 | 569 | 38.5 | Plus |
| InR-PC | 2144 | CG18402-PC | 1365..1660 | 435..721 | 569 | 38.5 | Plus |
| InR-PB | 2144 | CG18402-PB | 1365..1660 | 435..721 | 569 | 38.5 | Plus |
