BS31117.complete Sequence
1727 bp assembled on 2012-07-30
GenBank Submission: KX801918
> BS31117.complete
GAAGTTATCAGTCGACATGGAGAGTGAGCAGCCAGCGGCTGTAAAGGCTT
CAGCTCCAATTGAAGAGCCACAATCCACCGAAACAGCTGTTGAATTGGGG
AAACATAGCACCTTGAAGGCAGACTTATCAATAGATAAGTTGGAAACAGC
GACAACAGAAGCTACGAATGCCGTAGTAGAACCAGTAGAAATGGAGCAGC
AGGTGGAAAATGAACTGGTAAATGAGTCAACACAAGCCATGACATCGACC
ACAACCCAGGAAAAGGTGGTGGGTTCAGTGAATAATCTTGTAGAGGAGCA
ACAGTGTGTGGAAATGGAATTCGAAACATCATCAGATCTCGTGGTCCAGG
GAAGTCCATCGGAAGAATCCAAAAAAGTTGCCTCTGACGCTTCTGCTACT
GTGACCGCACCTCAAGTTCAGCCCGCTCCACATGTTGATTCAAGCCCTCA
AGCAAGTGGCCTCAGTCTGTTGGCTGCCTACAGCTCTGATGACTCGGATG
ATGAGAAAGTCACTCCAGTGCAGAACGGCGACAACGATGTGATTGAAGTT
CCAGTTACGGACCCCGCATCCTCCACCACCGCATATCGTCCAGTTGTAGC
TGTGAGCTCGGATGACGAGAGCTCAAAGAGCAGCAGCAGCAGCAGTGACT
CAGACTCCGATTCCGAAGGAGAATACCTCACCGTACTTCGGAAGAAGATT
GACAAAAGAATCAACACCGTGGATTGTGACGAGGATGACGAGGACTTTGA
TGAAGATGGGGCTACAGGAGATCGGTCTCGTCGTCGCCAGCCCCCGAAAG
TACGAGGAGAAATGCTCCTTGATGACCTTCCGCCTATTCATCAGCTAGAG
ATTACTGTACCCGAGGATGAATGCGTTGAACTTGGCAAAGTTCAGTCCAT
CGTGGATCAGCTTGTTTTGGTTTCCGTGCTGCCGAATTCCATGCTATTCG
ATCTCGACACCGTTTTGTTCCTGGAGAAGGGTCGCAAGGTCCTGGGCGAA
GTGTTCGATGTGTTGGGTCAAGTGTCGGATCCACTGTACTGCGTTCGATT
CAACAGTAACAAACAGATCCTCGATAGGGGCATTAAAATTGGCGACGTAG
TGTACTGCGCTCCCAAAACCGAACACACTCAATTTGTGATCCTCTCCAAG
CTGATGCAAGTTCGAGGATCGGATGCTTCGTGGGAGCACGATGTAGAACC
ACCAGCCCGCTACGTAGATCACTCGGATGATGAAGAAGAAAGAGAAGCCA
GGGCAGAGCAGCGAAAGCGCCGCCAAAGGGATCGCACAAACTCCACAGAT
TCCGTGGACACGGTAACCTCGGTGGCCACGACAGCCACTAAGGCTTCTTC
AGTTGCTCCTCCTCCTCGTCAACGCGGACGTCGTGGGCAACGAGAGAGTT
TCCGCCAGAGCCAGCGACCCTCCATTAACCAGCACAACCAGAATCAGCCA
CAGGACGAACAATACAACTTCCATCCAAGCTACAATCCGGGCAGCTGGCA
CTCCAACTACTACCAGAACTATCACCAGGCAGCGGCTAACTTTAACATGG
CTCAGCAGCATCCTGGCATGCCCTTCCCAGTGCCTAACTATGGCTACGGA
ATGCCCTACGCCATGCCGCCCATGTACCCACACATGTACCCGCCACCACC
ACCCTTTGCTCCTCCTCCGCCGAACAACCAGTCACATCAGGGTCAGCCGC
CACCCAGCTAGAAGCTTTCTAGACCAT
BS31117.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:01:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10341-RA | 1695 | CG10341-PA | 1..1695 | 17..1711 | 8460 | 99.9 | Plus |
| CG10341-RC | 1692 | CG10341-PC | 1..1692 | 17..1711 | 8380 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:02:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10341-RA | 1873 | CG10341-RA | 121..1817 | 16..1712 | 8470 | 99.9 | Plus |
| CG10341-RC | 1870 | CG10341-RC | 121..1814 | 16..1712 | 8390 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:01:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18699033..18700589 | 156..1712 | 7770 | 99.9 | Plus |
| 2L | 23513712 | 2L | 18698834..18698976 | 16..158 | 715 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:01:57 has no hits.
BS31117.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 10:23:34 Download gff for
BS31117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10341-RB | 70..1764 | 17..1711 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:40 Download gff for
BS31117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10341-RA | 122..1816 | 17..1711 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:51 Download gff for
BS31117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10341-RA | 122..1816 | 17..1711 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:55:51 Download gff for
BS31117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18698835..18698976 | 17..158 | 100 | -> | Plus |
| 2L | 18699036..18700588 | 159..1711 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:40 Download gff for
BS31117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18698835..18698976 | 17..158 | 100 | -> | Plus |
| arm_2L | 18699036..18700588 | 159..1711 | 99 | | Plus |
BS31117.pep Sequence
Translation from 16 to 1710
> BS31117.pep
MESEQPAAVKASAPIEEPQSTETAVELGKHSTLKADLSIDKLETATTEAT
NAVVEPVEMEQQVENELVNESTQAMTSTTTQEKVVGSVNNLVEEQQCVEM
EFETSSDLVVQGSPSEESKKVASDASATVTAPQVQPAPHVDSSPQASGLS
LLAAYSSDDSDDEKVTPVQNGDNDVIEVPVTDPASSTTAYRPVVAVSSDD
ESSKSSSSSSDSDSDSEGEYLTVLRKKIDKRINTVDCDEDDEDFDEDGAT
GDRSRRRQPPKVRGEMLLDDLPPIHQLEITVPEDECVELGKVQSIVDQLV
LVSVLPNSMLFDLDTVLFLEKGRKVLGEVFDVLGQVSDPLYCVRFNSNKQ
ILDRGIKIGDVVYCAPKTEHTQFVILSKLMQVRGSDASWEHDVEPPARYV
DHSDDEEEREARAEQRKRRQRDRTNSTDSVDTVTSVATTATKASSVAPPP
RQRGRRGQRESFRQSQRPSINQHNQNQPQDEQYNFHPSYNPGSWHSNYYQ
NYHQAAANFNMAQQHPGMPFPVPNYGYGMPYAMPPMYPHMYPPPPPFAPP
PPNNQSHQGQPPPS*
BS31117.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:20:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10341-PA | 564 | CG10341-PA | 1..564 | 1..564 | 2934 | 100 | Plus |
| CG10341-PC | 563 | CG10341-PC | 1..563 | 1..564 | 2917 | 99.8 | Plus |
