BS31128.complete Sequence
2363 bp assembled on 2012-07-30
GenBank Submission: KX804370
> BS31128.complete
GAAGTTATCAGTCGACATGGAATCAGCGCAGGCAACACCGCCGGCTGAGA
TGGAAAATCCGGCCAGCGTGGAAAATGGTGATTCTGGCCGGGATTCTAAC
CACATAGAGGGGAAAGCAATTGGAGACGTGGATATGAAAGCGGATTCCAT
TGAACAGCAGCTGGAAGAAAGCGATGTGAAAACTGAGTCTAATGGAGATC
AGCTTACAGACCAGGATGAGGGAAAAATAGAGCAGGATCTCAAGGCAGCC
GTACTGGAGCAGGTGCCAATCGAAGAGGAAGGACTAAGTCTGCGATTCAA
GGATCTGCAGGCCCAGGAAAAGGTGAAGGAACTGCAGCAAACCCCTTCGC
AACCCCCACAGAACGACATCCTATCCCATGTCCACTGCTTGGCCCAGCTT
GAGGAGCAGCGGCGCAACTACGAACAGCAGTTGGAACAACTTCGTACGTC
CAATGTCCAGAAGGATAATATGATCACGCTCATTCAGCGGGAGAACGCCA
TTCTGGGCAAGGAGAAGCAGGCCTGCCGCAAGGAAATGGAAATGGCCAAC
AAGGAGAAGGAAGCCACCGTCATTAAGTTCGCCATGAAGGAGAAGCTACT
TATCGACGCCAAGAAGGAGAAGGAGGCGGTGGAGAAGCAGCTGGCCGAGG
CCAAAAAGGAAGTAAAGAATGTGTCCACCAGATTCCTGGCTGTGAGCGAA
GAAAAGTCCCGCATGACGTACATCATCGATGAAAAGTGCAATGAAGTCAG
AAAATATCAGAGGGAGTGCGAAAAGTACAAAACAGAAATGGGTCACTTGG
AATCCAAGCTCAAGTATCACATAAACAAACTGAACATCGAAACAGAAGCC
AAAGCGGTTGTAGAACGCAAACTGGAAGAGGAAAAGAATGCGCCCAATAA
ACTGGAGGAAAAGGCAAATGAGAAGCTTAAAATGGAATTTGAAGCCAACA
CAATACTCTTGAAACACGAGATTACCAGCAAGACTGAGGCTCTGGATAAG
CTCACCAAAGAGCAGCAAAAACTAAGCGCAGCCAACAAAGAACTGCAGAA
CCAGCTTCAGGAGATCACCACGGAGCATAATCAGCTGACAGAGGAGTATA
ATCGTTTGCGAGAGCTGCACAATTCCGTAGAAGGTTCATACAGTGATGAG
CTGCTTAACTCCGCAAAGCTCAGGGGGCAACTGGAGGAACTGCAGCTTCT
GCGTACTCAGAACACAATAAACGAAGAAAAACTGATGGACCAACAGAAAC
GAGTCCAGAAACTGGAGGCTTTGGTCCAAGACAACGAAACGGACCTGGAG
CAACTGAAAGTCAAAAGGCAGGAGCTACTCACAATTAACAAGGAGATGAG
TGAGCTAATCGTGCAGCTGCAGAATGATATTTGCCTGGCCAAAGCAAAGG
CGCAGGGACTTGATGCTGAGAACAAGTTACTGAAGCAGGAAAAGCTCACC
TACGACACCAAGTATAATCAACTGGAGCAGCAACTAAGTTTGGAGGCATC
GGAGAAAAACGAGGAGCGACTGTTGCTGGCCAAGCATTTGTCCGAAAAGA
CGAAGATGTACGAACTGACCAAGCAGAAGCTGGAGGATGTTCAGGGTGAC
TTTGAGGCTACCCAGCACAAGCATGCCACCGTGCTGAAAGAGCTCCATCG
CGAGCTGAACAAGTACAAAAGGGGAATTACGGAACCGAAGACACCAATCA
GCTACTGCAGCAACTGTCAGCAGGCGATCAATGGGTATCCAACGGAGAAT
CCTCAACAACGGAGTCATAGTCGCTCCAGTAGCCACGGCAGCATGCACAG
CGGCAGTCGACGGGCCAGCGAGTCTTCCGAATCGGAAACGGTGGCCAGTA
GTGCCACCACCGTGCAACAGCCGCCACCGCAGCAAGATCTCCAGGCGGTA
CCGTCCAAAAAAGTCCTCGTAGAGCGAATTCTGCGACTGCAGCAGGCCAC
TGCCCGCCAAACCGAACGGATCGAGTTCCTGGAGAACCACACGGCCGCTC
TGGTGGCCGAGGTGCAGAAGAAATCCAAGGTGGTGCAGCACTACATGCTC
AGGGATCAGACTGCCGGCGCATTAACCACATCGCGGAGCGATCAGAACAA
AAGCGAGTTGGTCAAGTACGGAAATGGTATCATGGCAGCCATCTATGGTG
GTGGATCATCGAAGACGGGAGGCGAGAATAAAGCCATGTCCCTCGAACTT
TCTCTAGAGATTAACAAGAAACTGCAAGCTGTGCTCGAGGATACGCTCTT
GAAGAATATTACGCTGAAAGAGAACCTCGATGTGTTGGGACTCGAAGTGG
ATAATCTCACGAGGAAATTGCGCTCCCTGGAGGGCAGTTGCAAGTAAAAG
CTTTCTAGACCAT
BS31128.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:02:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4925-RA | 2331 | CG4925-PA | 1..2331 | 17..2347 | 11640 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:02:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4925-RA | 2559 | CG4925-RA | 113..2444 | 17..2348 | 11645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:02:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16348862..16349812 | 2348..1398 | 4755 | 100 | Minus |
| 3L | 28110227 | 3L | 16351120..16351839 | 736..17 | 3600 | 100 | Minus |
| 3L | 28110227 | 3L | 16350024..16350205 | 1400..1219 | 910 | 100 | Minus |
| 3L | 28110227 | 3L | 16350493..16350648 | 1075..920 | 765 | 99.4 | Minus |
| 3L | 28110227 | 3L | 16350289..16350433 | 1218..1074 | 725 | 100 | Minus |
| 3L | 28110227 | 3L | 16350831..16350954 | 858..735 | 620 | 100 | Minus |
| 3L | 28110227 | 3L | 16350710..16350774 | 920..856 | 325 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:02:24 has no hits.
BS31128.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 10:23:35 Download gff for
BS31128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4925-RA | 60..2388 | 17..2345 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:44 Download gff for
BS31128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4925-RA | 113..2441 | 17..2345 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:57 Download gff for
BS31128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4925-RA | 113..2441 | 17..2345 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:55:57 Download gff for
BS31128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16348865..16349810 | 1400..2345 | 100 | <- | Minus |
| 3L | 16350025..16350205 | 1219..1399 | 100 | <- | Minus |
| 3L | 16350289..16350431 | 1076..1218 | 100 | <- | Minus |
| 3L | 16350493..16350647 | 921..1075 | 99 | <- | Minus |
| 3L | 16350710..16350773 | 857..920 | 100 | <- | Minus |
| 3L | 16350833..16350952 | 737..856 | 100 | <- | Minus |
| 3L | 16351120..16351839 | 17..736 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:44 Download gff for
BS31128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16343933..16344052 | 737..856 | 100 | <- | Minus |
| arm_3L | 16341965..16342910 | 1400..2345 | 100 | <- | Minus |
| arm_3L | 16343125..16343305 | 1219..1399 | 100 | <- | Minus |
| arm_3L | 16343389..16343531 | 1076..1218 | 100 | <- | Minus |
| arm_3L | 16343593..16343747 | 921..1075 | 99 | <- | Minus |
| arm_3L | 16343810..16343873 | 857..920 | 100 | <- | Minus |
| arm_3L | 16344220..16344939 | 17..736 | 100 | | Minus |
BS31128.pep Sequence
Translation from 16 to 2346
> BS31128.pep
MESAQATPPAEMENPASVENGDSGRDSNHIEGKAIGDVDMKADSIEQQLE
ESDVKTESNGDQLTDQDEGKIEQDLKAAVLEQVPIEEEGLSLRFKDLQAQ
EKVKELQQTPSQPPQNDILSHVHCLAQLEEQRRNYEQQLEQLRTSNVQKD
NMITLIQRENAILGKEKQACRKEMEMANKEKEATVIKFAMKEKLLIDAKK
EKEAVEKQLAEAKKEVKNVSTRFLAVSEEKSRMTYIIDEKCNEVRKYQRE
CEKYKTEMGHLESKLKYHINKLNIETEAKAVVERKLEEEKNAPNKLEEKA
NEKLKMEFEANTILLKHEITSKTEALDKLTKEQQKLSAANKELQNQLQEI
TTEHNQLTEEYNRLRELHNSVEGSYSDELLNSAKLRGQLEELQLLRTQNT
INEEKLMDQQKRVQKLEALVQDNETDLEQLKVKRQELLTINKEMSELIVQ
LQNDICLAKAKAQGLDAENKLLKQEKLTYDTKYNQLEQQLSLEASEKNEE
RLLLAKHLSEKTKMYELTKQKLEDVQGDFEATQHKHATVLKELHRELNKY
KRGITEPKTPISYCSNCQQAINGYPTENPQQRSHSRSSSHGSMHSGSRRA
SESSESETVASSATTVQQPPPQQDLQAVPSKKVLVERILRLQQATARQTE
RIEFLENHTAALVAEVQKKSKVVQHYMLRDQTAGALTTSRSDQNKSELVK
YGNGIMAAIYGGGSSKTGGENKAMSLELSLEINKKLQAVLEDTLLKNITL
KENLDVLGLEVDNLTRKLRSLEGSCK*
BS31128.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:20:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4925-PA | 776 | CG4925-PA | 1..776 | 1..776 | 3871 | 100 | Plus |
| zip-PH | 1964 | CG15792-PH | 1228..1812 | 1..559 | 230 | 21.1 | Plus |
| zip-PG | 1971 | CG15792-PG | 1220..1804 | 1..559 | 230 | 21.1 | Plus |
| zip-PE | 1971 | CG15792-PE | 1220..1804 | 1..559 | 230 | 21.1 | Plus |
| zip-PC | 1971 | CG15792-PC | 1220..1804 | 1..559 | 230 | 21.1 | Plus |
| zip-PH | 1964 | CG15792-PH | 1257..1842 | 129..760 | 212 | 20.1 | Plus |
| zip-PG | 1971 | CG15792-PG | 1249..1834 | 129..760 | 212 | 20.1 | Plus |
| zip-PE | 1971 | CG15792-PE | 1249..1834 | 129..760 | 212 | 20.1 | Plus |
| zip-PH | 1964 | CG15792-PH | 809..1417 | 132..771 | 204 | 21.4 | Plus |
| zip-PG | 1971 | CG15792-PG | 801..1409 | 132..771 | 204 | 21.4 | Plus |
| zip-PE | 1971 | CG15792-PE | 801..1409 | 132..771 | 204 | 21.4 | Plus |
| zip-PH | 1964 | CG15792-PH | 852..1252 | 318..774 | 167 | 23 | Plus |
| zip-PG | 1971 | CG15792-PG | 844..1244 | 318..774 | 167 | 23 | Plus |
| zip-PE | 1971 | CG15792-PE | 844..1244 | 318..774 | 167 | 23 | Plus |
