BS31136.complete Sequence
1460 bp assembled on 2012-07-13
GenBank Submission: KX800842
> BS31136.complete
GAAGTTATCAGTCGTCATGTTCAAGTTCGTGCTGAACGACGCCGCCAGCT
ACGTGCGATCCAATGTGCGGGAGTTCAGTTTGAATGCACTGCGTCTGCTG
CCGCAACTGCCTCAATTGAGTCCATACGATGTTAACCTTGTTCTGAGGGA
GAACGAGTTCGTTTACAACTTTCCCGTGGATGGAGTCATCCGCAGCTATG
AAACAAATCAGCTGGGATCAAACTGGCCCTGCGAGGATTCCCGCACGGAG
GCCAGCTTCCTGCACCGCAACGGCTTCATTTGTGGCATTTTCGACGGGCA
TGCGGGAGCAGCATGTGGCCAAGTGGTGTCCAAGCGACTGCTTCGCTATG
TTTCGGCGGCCACGCTGCCGCGCCAGGTGCTCCGGGAGCAGATGAAGCAG
GGTGCCGACAGCCAGTCGTTCCTCAAGTGCCACAATGACAACGTGGACTT
TGTTAGCATGATCAAGCCCATGTACGAGGCTAGTTTCCTCAAGTATGTCA
ATCAATTGTTAGAGACACCGCAACGGGATGTATCCAGTGAACTGGTGAAC
GCCTTCCTCCAGCTGGATGAAGAGATCTCGCAGGAGGCTCTGACCAGCAA
CGATGTACGCACCATGAACGTGGCCCTTTCTGGAGCCGTTGCCTGTTTGG
TTCACATTGAGGGACTGCAGATGCACGTGGCCAGCACGGGTGATTGTGGC
GCAGTGTTGGGCGTTCTTGATCCCCAGACGCAGCAGTGGCACTCAAAGAA
GCTTAACATCGAACACAATGCTGACAATATGTCCGAGGTGCGTCGCATTC
TGGCCGAGCATCCCAAGGAGGAGCATGAGACGGTGATCCGAAACGGCAGG
CTGCTTAGCCAGCTGGCGCCGTTGCGTGCCTTTGGGGACTTTCGCTACAA
GTGGTCCCAGGAAATAATGCAGCAGAAGGTGCTGCCGATGTTCGGCGTGC
AGGCAATGGCGCCGAATTACTATACGCCACCGTACCTAACCGCCCGCCCC
GATGTCCAGCAGCACGAATTGGGGCCCAACGACAAGTTTCTAGTCATCGC
CAGCGACGGCCTATGGGATTTCCTTCCGCCCAGCGAGGTGGTCAGCTTGG
TGGGGGAGCACATCAACTCCAAAAAGATCCTCGAACCGATGCGCCTGCCG
GAAGGCGATACAACGCTGCAGGAAATCTCTCAGCAGCTGGCCGAAAGAAA
GGCTGGCCTCACTCGCAAACCCGTAGACCAAAACGCGGCCACGCATCTCA
TCCGGCATGCTTTGGGCGGCACCGACTATGGGATTGAGCACTCGAAGATC
TCGTACTATTTGACGCTGCCCAGGGACGCGGTGCGTCTGTATCGCGACGA
CATCACAATCACTGTCATCTACTTTAACTCGGAGCACATTGCCAAGCTGC
ACAGCGATGTGGATCAAACGGAGGTCACTGCGCCGGTAGCATGAAAGCTT
TCTAGACCAT
BS31136.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:44:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdp-RB | 1428 | CG12151-PB | 1..1428 | 17..1444 | 7140 | 100 | Plus |
| Pdp-RA | 1428 | CG12151-PA | 1..1428 | 17..1444 | 7140 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:44:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdp-RB | 2170 | CG12151-RB | 520..1947 | 17..1444 | 7140 | 100 | Plus |
| Pdp-RA | 1957 | CG12151-RA | 307..1734 | 17..1444 | 7140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:44:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7732313..7732882 | 1201..632 | 2850 | 100 | Minus |
| X | 23542271 | X | 7732987..7733489 | 633..131 | 2515 | 100 | Minus |
| X | 23542271 | X | 7732002..7732245 | 1444..1201 | 1220 | 100 | Minus |
| X | 23542271 | X | 7734017..7734132 | 132..17 | 580 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:44:14 has no hits.
BS31136.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-13 13:56:26 Download gff for
BS31136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pdp-RA | 276..1697 | 22..1443 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:10 Download gff for
BS31136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pdp-RA | 312..1733 | 22..1443 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:18 Download gff for
BS31136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pdp-RA | 312..1733 | 22..1443 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:18 Download gff for
BS31136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7732003..7732245 | 1201..1443 | 100 | <- | Minus |
| X | 7732314..7732881 | 633..1200 | 100 | <- | Minus |
| X | 7732988..7733489 | 131..632 | 100 | <- | Minus |
| X | 7734019..7734127 | 22..130 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:10 Download gff for
BS31136.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7626036..7626278 | 1201..1443 | 100 | <- | Minus |
| arm_X | 7626347..7626914 | 633..1200 | 100 | <- | Minus |
| arm_X | 7627021..7627522 | 131..632 | 100 | <- | Minus |
| arm_X | 7628052..7628160 | 22..130 | 100 | | Minus |
BS31136.pep Sequence
Translation from 16 to 1443
> BS31136.pep
MFKFVLNDAASYVRSNVREFSLNALRLLPQLPQLSPYDVNLVLRENEFVY
NFPVDGVIRSYETNQLGSNWPCEDSRTEASFLHRNGFICGIFDGHAGAAC
GQVVSKRLLRYVSAATLPRQVLREQMKQGADSQSFLKCHNDNVDFVSMIK
PMYEASFLKYVNQLLETPQRDVSSELVNAFLQLDEEISQEALTSNDVRTM
NVALSGAVACLVHIEGLQMHVASTGDCGAVLGVLDPQTQQWHSKKLNIEH
NADNMSEVRRILAEHPKEEHETVIRNGRLLSQLAPLRAFGDFRYKWSQEI
MQQKVLPMFGVQAMAPNYYTPPYLTARPDVQQHELGPNDKFLVIASDGLW
DFLPPSEVVSLVGEHINSKKILEPMRLPEGDTTLQEISQQLAERKAGLTR
KPVDQNAATHLIRHALGGTDYGIEHSKISYYLTLPRDAVRLYRDDITITV
IYFNSEHIAKLHSDVDQTEVTAPVA*
BS31136.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdp-PB | 475 | CG12151-PB | 1..475 | 1..475 | 2464 | 100 | Plus |
| Pdp-PA | 475 | CG12151-PA | 1..475 | 1..475 | 2464 | 100 | Plus |
