BS31145.complete Sequence
2147 bp assembled on 2012-09-04
GenBank Submission: KX804070
> BS31145.complete
GAAGTTATCAGTCGACATGGAGGCAAAGGTGCACCGCCAGCATCAACGGC
ATCGTCGCACGGAGGCGCGACAGCGGCGCCTGGAACGGGAGGCGGTGGCT
ACGGGAGCGGCAGCTCCAACGCCCACCACGCCCGAGCGGGCAGAGGCCTT
GGACTGTGCCACAGCCCTCAACGAGGGCGTGGTATCCGCGGATCCGGGCG
GCAGCGGCGGTACGCCAAGCAGTGCGGGTCGCATCAGTGCCCAGAGCTCG
GCGGACAGCATAGAGCTGGTGGGTTCGCCCAGCCAGACGTCGCAGCAAAC
GGTGGTGCTGGTCAACGGCCACGCCCCGCCGGGCCAGGAGGAGGGGGAGG
AGGAGTCGCCACTGGGCGCAGGCAATACCAGGGACTCACCGCCGCCGCCC
AAGCAGAGCGATGGCAGTCGCAACTCATCCGGCGATGCGATGAGTCTGCG
GGAGACCCTGCAGCAACTACCGGCCACCCATCACCATCGGTCCAGGCGAA
CTCACTCACCTGCTGATCCCGATGCGTCCTTTCATCGCGGAATACTTGGG
TACATGGACCGGGAGCTCAAGCAGAGCTCTCCCACGCCCTCCGCCCCCGC
CGGAACCGGAAACGGAACTGGAAACGGAACTAGCACGGGCGCATCGAGAA
AACAGCAGTCCCTCTCCGACCCACAGGCCAGTCCCGCCCAGCGATCCCTG
CGTTCGAGGAGCAGCTTCGACAAGAGTCCGCGGCGCAAAAGGAGCAAGTC
GGAGTCTCGGCGGAGACGCGAACGGAAGCTAATAGCCGCCGGAGAGATGG
AGGTCCGGCAGGCCAACGAAACCCTGATGCGGTACCTCAAGCAGTGCTCC
GACATGCACGACGCCTCGCTTTCCGGCGAACTCGAGATCGACCAGAGCCT
CGAGGAGAGACGCGTCCACCGGAAGACCAAGTCGCAAAGGGACAAGCGGG
GCCAGCTAATCTCCAAGTTGTACTCAGCAGGCGGTATATCCTCGATTCTG
AAGGAGCTGGCCGATGACATAGCTCCGGCCGATGGCGAGGAGATCTACAA
CCCATTCACGCCGGTCGTCTCGCCCACGGACGATGCGCCCGCGCACATCG
ACAAGATGTTCCTGCAGACGTCATCCGGATATCGACCCGTGGAGCACAGC
TACTACAAGCGCTCCTTCCTGGGGGCGGCTGTTCGTGGATCCGCCGGAAT
TTCGGCATCCGGCGGCGGAGGTGGATGTGCAGGCGGTGGCGGAGGTCGCC
TCGATGGCATCTCGGCCGCGGAGCTTGGAGGCGCCGGTCGCCTCTTCCGC
TCCAGCGGCAGCCACGCCCACGGCGGCGACAGAATGGGCGGAAATGGAAG
TGGGCGTGGCAGCTACGGTGATACCCGCTGTTTGCTGGATGCCGACTTTA
ATCGCAATGGTATCACCAGCAACATACAACTAGCCTGTGTAGTTCAACGA
ATCTGGCTGCTCATCTCGAACATATGCCACGGCTTGCTAGCCGGTCTAGC
TCTGGCCCATCTACTCTTCGTGCTGAGCAGCCACCCCATGGACTGGGCCA
AGGTTATCAATGGCATGAGTCTTGCGGGCGAGACGGTGTCATCAACGGCC
CAACCCCCAGCCGCATCGACACCATCGGCGATAGACATCGATTCCGGCGA
TCGGGGAACGGAGTCGGGCGAATCCTCATCCCCATCCGCAGCAGCATCCG
GACTGGCCCTGATAAGTGACTACGCCGGATTTGCGGAGATCTACTTAAAT
ACCTTCTACTGCTTGGCCATAATCTGTCTGGTTTCCGTTTTCGATCGGAT
GGACATCTGTCGCTGGAGCTTCTCGAATGCCAGCGAACTGATCTCGTTTC
GGTGGCTCATCATCACCATGATCTATGTGGCGACAATAATCCTAGCCATC
TGCTCCGATTCCATCGACGAGAAGCTGTACCTGTTCAACAACAATGCCAA
CATAACGCTGACGCAACAGGAGATGCTGAGCAACAGTGTGCAGAGCGTGT
GGAGCAGCCTGTCGGTGACGAGGAGCATTGCCGCCATATCCGGGTGGATT
ATGATCGGACTGACGCCGCAGGAGGATATGCTATATGAGCACCTGGTGGA
CCTCACCAAATATCAGTTGACAAATAATTGAAAGCTTTCTAGACCAT
BS31145.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:56:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14186-RA | 2115 | CG14186-PA | 1..2115 | 17..2131 | 10575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:56:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14186-RA | 3522 | CG14186-RA | 461..2583 | 10..2132 | 10585 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:56:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20102415..20103367 | 962..10 | 4735 | 99.8 | Minus |
| 3L | 28110227 | 3L | 20101224..20101665 | 1404..963 | 2210 | 100 | Minus |
| 3L | 28110227 | 3L | 20100602..20101003 | 1798..1397 | 1980 | 99.5 | Minus |
| 3L | 28110227 | 3L | 20099243..20099421 | 1975..1797 | 895 | 100 | Minus |
| 3L | 28110227 | 3L | 20099023..20099180 | 2132..1975 | 790 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:56:06 has no hits.
BS31145.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-04 14:22:06 Download gff for
BS31145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14186-RA | 448..2561 | 17..2130 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:31 Download gff for
BS31145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14186-RA | 468..2581 | 17..2130 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:17:14 Download gff for
BS31145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14186-RA | 468..2581 | 17..2130 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:17:14 Download gff for
BS31145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20101224..20101665 | 963..1404 | 100 | <- | Minus |
| 3L | 20099025..20099179 | 1976..2130 | 100 | <- | Minus |
| 3L | 20099243..20099420 | 1798..1975 | 100 | <- | Minus |
| 3L | 20100603..20100995 | 1405..1797 | 100 | <- | Minus |
| 3L | 20102415..20103360 | 17..962 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:31 Download gff for
BS31145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20092125..20092279 | 1976..2130 | 100 | <- | Minus |
| arm_3L | 20092343..20092520 | 1798..1975 | 100 | <- | Minus |
| arm_3L | 20093703..20094095 | 1405..1797 | 100 | <- | Minus |
| arm_3L | 20094324..20094765 | 963..1404 | 100 | <- | Minus |
| arm_3L | 20095515..20096460 | 17..962 | 100 | | Minus |
BS31145.pep Sequence
Translation from 16 to 2130
> BS31145.pep
MEAKVHRQHQRHRRTEARQRRLEREAVATGAAAPTPTTPERAEALDCATA
LNEGVVSADPGGSGGTPSSAGRISAQSSADSIELVGSPSQTSQQTVVLVN
GHAPPGQEEGEEESPLGAGNTRDSPPPPKQSDGSRNSSGDAMSLRETLQQ
LPATHHHRSRRTHSPADPDASFHRGILGYMDRELKQSSPTPSAPAGTGNG
TGNGTSTGASRKQQSLSDPQASPAQRSLRSRSSFDKSPRRKRSKSESRRR
RERKLIAAGEMEVRQANETLMRYLKQCSDMHDASLSGELEIDQSLEERRV
HRKTKSQRDKRGQLISKLYSAGGISSILKELADDIAPADGEEIYNPFTPV
VSPTDDAPAHIDKMFLQTSSGYRPVEHSYYKRSFLGAAVRGSAGISASGG
GGGCAGGGGGRLDGISAAELGGAGRLFRSSGSHAHGGDRMGGNGSGRGSY
GDTRCLLDADFNRNGITSNIQLACVVQRIWLLISNICHGLLAGLALAHLL
FVLSSHPMDWAKVINGMSLAGETVSSTAQPPAASTPSAIDIDSGDRGTES
GESSSPSAAASGLALISDYAGFAEIYLNTFYCLAIICLVSVFDRMDICRW
SFSNASELISFRWLIITMIYVATIILAICSDSIDEKLYLFNNNANITLTQ
QEMLSNSVQSVWSSLSVTRSIAAISGWIMIGLTPQEDMLYEHLVDLTKYQ
LTNN*
BS31145.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:27:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14186-PA | 704 | CG14186-PA | 1..704 | 1..704 | 3608 | 100 | Plus |
