BS31149.complete Sequence
3065 bp assembled on 2012-09-12
GenBank Submission: KX806266
> BS31149.complete
GAAGTTATCAGTCGACATGTCTGATCGTCGTGGCACAAAAGTTGGAACTG
GTACGAAGGCTTTGGAGTATTGGTGCCGAGTTGTGACCCAAGGATATAAT
GGGGTCAAGGTGGAGAACATGACCACTTCCTGGCGAAATGGACTTGCCTT
CTGCGCCATAATACACCACTTTCGGCCGGATCTTATAGATTTCGACCGAC
TTAAAGCAGACGATATCTATGAGAACAACGATTTGGCCTTTACAACGGCC
GAGAAATATTTGGGAATTCCCGCACTGCTCGATGCAGCTGACATGGTTTC
GTATGAAGTACCTGATAGACTCTCCATACTAACGTATTTATCCCAGTTTT
ACAAGGTGCTCGGCAAGAGCCTGAAGCACCCGAAGCCAGAGGAGCCACTT
GGCGAAGAGAGTGAGCCACCGCAAAAGGTGATGCACATTGTTGGGATGCC
TCGACGTGATAAGTGCCAGAAATGCAACCTTCCTGTTTTTCTCGCCGAAA
GGGTCCTTGTCGGCAAACGGGCTTATCATCGCACATGCTTAAAATGTGCA
AGATGTTCGTCATTGCTCACACCCGGGAGTTTTTATGAAACGGAGGTCAA
TAACATATACTGTTGCGAGACTTGTCCCGATGAAGAAAGTGAACCGGAAT
CTGACATTTTAAAGTTAAAGACAACCACTACTGATTCTCCGAATGATAAA
CAAATGGTGGCACAAAGTTCTGATTACTCTGAAGCTGAAGATAAACAAGA
AGACCTGGAAGATAATGATATACGTACTACTGATAAGCCTGAAAACTTCC
AACCGCCGTCCAACAAAGATGAACAAAATAATGAACTAACTATTAATCCG
GTAAACCCTATATTATCAGAGGAGCGTAAAATCTCTTTTATTCCACTAGA
CGAAGAAGATGGTGGCCTTATTGAACAATATAATAAATCAACAACTCCTG
TAAAGCCCGCTATACCAGAGAAACCAAAAGTCTCTACTCTTCCACTAGAC
GATGAACAACATGCTGGCGTTGAACAAAACAATGATCTGGCGGTTAGTCC
GGAAAATGACATTCCAAAAGAGAAACTTAAGATTTCTTCGGTCTCAATAT
ATCTTGAAGATGACCGCCTTGTTGTAGATGCAATACATCCGGATAATTTA
GATAAACAAGAAGCTTTGAACAATACATCAGACGCACTCATTCCAGAATC
ACAGGAAGCACCGATTCCTGAAAATAACACTCAAGTAGCCATTAAACCAG
AAGACCATATAAGCCCGCGTAAAGAAAATAAAATTTTCTCAAACACAGAA
AGCTGCTCTAAGCAGGAAGGTGTTCTCCCAAAACAAATGGATCTCGAGTC
TCCCAAGGACAAGGTAATTGAGACAAAAGCATCTGAAACTGACTATCCAG
AGGATCTAAATCCCTTTAAAGATGATGACTCATCTAAAGGTGCCAACCCA
TTCGACAGCTCTGATGATGAAGTGGAGCTTCTTAAAGCCATTCCAGCCCA
ACAAAGCAAAGGAAAAGTTGTACCGCCCCGTCCACCGCCACCTAAAATTG
GCCTTTCATCCATCTCCAATCCGTCAGAGAAACCACATTCCAGCCCTACA
CTTTCGCATGGGAAAAAAATGCCGATGCCAACACCGAGAATATCTATATC
AAAAACCCAGACTCCAGCAAAACCAATGACGCATCAAGGCCAGAAAAGTA
GTATTTCCTCTTCGTCTTCGGAGCATTTGAATAGCATAAGAACGTTCGAT
CGCGGAGCAGATGACCGTGGCTCAAGCATCTCCTTGCCATCTGCAAATGG
GCCTCGCAAGCCACTTCGCGCCTCAGTGGGGAGTCCGCTGCGAAGCGAAG
AATCGAGTCCCACTACCAGTCTTAGCTCTATTACCTCTCCGATGCGGAAG
AAGCGCCAGGCACCTTTGCCCCCAATACAAACGGACTTTGACAGTGATCC
TGGATTTTCAAAATTGTCCGACGAACAAAAGGCATTGTTGCACACTCAGC
TTAAGGCCCCAAATCTGGGTGATTCAACCAGAAGACTAATACCACTTGAC
CAGAGTCTGCTATCCGATGAGGCAACCGAGTCGAGTAATTACGACGAGAG
CTTAAGTACATCCAATGCCGACGAGGAGGTAAATGTGGTATACCGACGCA
TTTTGGTGCCGCCAACTCAACCCGAAAACACTGTTGAACGTAGCAAGGAG
GATCAAAAATCGCCTATCGTGTATAACGACTTCGATAGAAACGTAAGCCC
ATTGGGGCACAATAAATCCACTCATGGGAAATGGAAGAGGCGAAAGGGAC
CAGCACCAGCGGTTCCAATACCACCGCGCAAAGTCTTACAAAGGCTTCCG
CTGCAAGAAATTCGCCACGAGTTCGAAATTATTGCGGTACAGCAGCTGGG
TCTTGAGAAACAAGGCGTTATTCTGGAGAAAATGATCAGGGATCGCTGTG
AGCGTTCCTTAGATGCCACCGATACTGATGGTCCCGAATCCGCAGAAGTG
CTAACCAACTCAAAGGAAGTGGAAGATCTTATATTGCAACTGTTCGAGCT
GGTCAACGAGAAAAACGAATTGTTCCGCAGACAAGCGGAACTGATGTACC
TTCGACGTCAGCATCGCCTGGAGCAGGAGCAGGCGGACATAGAGCATGAG
ATACGAGTATTAATGGGGCAACCGGAGCACAACAAAACCGATTCGGATAA
AGCCCATGAGGAAGTATTAATCAATCGCCTTGTGAAGGTGGTTGAAATGC
GTAACGAAGTAATTGATAGCCTAGAGACTGACCGAGTTCGCGAGGCGCGA
GAGGATATGAGCATCAAGAATCGGCTTCATATATACAATTCTGAGCGCGA
GGAACCACCAGCACATCCGAGAAGCGCTGACAAATCATCCAAAAAGCTGT
CTAAAAAGGAACGAAAAAAACTTAAGGAGGAAAATAAGCTGGGCAAGGGC
AAAAAGTCGGACCTCGACAAGGACGTCGATGAGTCCGAACAGGCACCAGC
TTTGGAAAAGGTTAAAAAGAAGCGAAACTTGTTCTTTTTGAAAATGTAGA
AGCTTTCTAGACCAT
BS31149.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:04:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MICAL-like-RA | 3033 | CG11259-PA | 1..3033 | 17..3049 | 15165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:04:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MICAL-like-RA | 3357 | CG11259-RA | 196..3228 | 17..3049 | 15165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:04:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13012105..13015137 | 3049..17 | 15165 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:04:54 has no hits.
BS31149.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-12 10:03:46 Download gff for
BS31149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MICAL-like-RA | 171..3203 | 17..3049 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:47 Download gff for
BS31149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MICAL-like-RA | 196..3228 | 17..3049 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:20:51 Download gff for
BS31149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MICAL-like-RA | 196..3228 | 17..3049 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:20:51 Download gff for
BS31149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13012105..13015137 | 17..3049 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:47 Download gff for
BS31149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13005205..13008237 | 17..3049 | 100 | | Minus |
BS31149.pep Sequence
Translation from 16 to 3048
> BS31149.pep
MSDRRGTKVGTGTKALEYWCRVVTQGYNGVKVENMTTSWRNGLAFCAIIH
HFRPDLIDFDRLKADDIYENNDLAFTTAEKYLGIPALLDAADMVSYEVPD
RLSILTYLSQFYKVLGKSLKHPKPEEPLGEESEPPQKVMHIVGMPRRDKC
QKCNLPVFLAERVLVGKRAYHRTCLKCARCSSLLTPGSFYETEVNNIYCC
ETCPDEESEPESDILKLKTTTTDSPNDKQMVAQSSDYSEAEDKQEDLEDN
DIRTTDKPENFQPPSNKDEQNNELTINPVNPILSEERKISFIPLDEEDGG
LIEQYNKSTTPVKPAIPEKPKVSTLPLDDEQHAGVEQNNDLAVSPENDIP
KEKLKISSVSIYLEDDRLVVDAIHPDNLDKQEALNNTSDALIPESQEAPI
PENNTQVAIKPEDHISPRKENKIFSNTESCSKQEGVLPKQMDLESPKDKV
IETKASETDYPEDLNPFKDDDSSKGANPFDSSDDEVELLKAIPAQQSKGK
VVPPRPPPPKIGLSSISNPSEKPHSSPTLSHGKKMPMPTPRISISKTQTP
AKPMTHQGQKSSISSSSSEHLNSIRTFDRGADDRGSSISLPSANGPRKPL
RASVGSPLRSEESSPTTSLSSITSPMRKKRQAPLPPIQTDFDSDPGFSKL
SDEQKALLHTQLKAPNLGDSTRRLIPLDQSLLSDEATESSNYDESLSTSN
ADEEVNVVYRRILVPPTQPENTVERSKEDQKSPIVYNDFDRNVSPLGHNK
STHGKWKRRKGPAPAVPIPPRKVLQRLPLQEIRHEFEIIAVQQLGLEKQG
VILEKMIRDRCERSLDATDTDGPESAEVLTNSKEVEDLILQLFELVNEKN
ELFRRQAELMYLRRQHRLEQEQADIEHEIRVLMGQPEHNKTDSDKAHEEV
LINRLVKVVEMRNEVIDSLETDRVREAREDMSIKNRLHIYNSEREEPPAH
PRSADKSSKKLSKKERKKLKEENKLGKGKKSDLDKDVDESEQAPALEKVK
KKRNLFFLKM*
BS31149.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:30:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MICAL-like-PA | 1010 | CG11259-PA | 1..1010 | 1..1010 | 5229 | 100 | Plus |
| Ehbp1-PG | 965 | CG15609-PG | 434..881 | 8..448 | 278 | 25.6 | Plus |
| Ehbp1-PB | 987 | CG15609-PB | 456..903 | 8..448 | 278 | 25.6 | Plus |
| Ehbp1-PI | 994 | CG15609-PI | 456..701 | 8..259 | 277 | 31 | Plus |
| Ehbp1-PF | 1141 | CG15609-PF | 456..701 | 8..259 | 277 | 31 | Plus |
