BS31155.complete Sequence
2717 bp assembled on 2012-07-30
GenBank Submission: KX805323
> BS31155.complete
GAAGTTATCAGTCGACATGGCGCCGCAGCCAGTGGTTACGGGGCTATCTC
CGAAGGAGGGTCCTCCTGGCACCCGCGTTATCATTCGCGGCGAGTTCCTG
GGCACCCGAGTGCAAGATCTAATTGGTCTAAAAATCTGCGGTTCAGATTG
TCTGCTGTCGGCGGAGTGGAAATCACCCAATAAAATCATCGCACGCACTG
GTCCGGCGAAGGGAAAAGGCGATATCATAGTGACCACTTTAAGCGGCGGA
GTGGGCACGTCCACGGTTCAGTTTCGTGCATACCACGAGACCATTGGCCC
GCTCAAGGAGTCCGCCGTGTGGATCGAGGAGTCGCCCTCGCAGAATTTTG
CCTGGGGTCGGCGCACCCTAGCCCAATCCGGACTGACGCAGGAGGATCCA
CTTGGGCTGTCCATCGAGGGTAACGAGCAGAAGATCCCCGAGGACCTCCG
CGATCTCTTTCCCGAAGCCTGCGGGGATCTGTCGCAGGAGCACTTCTCCC
CGGCCTGGTTCCTGCTTGAAAATCACCTGGCCACCTCCTTCGAGGATCTC
AAGGCGGGCCTGTCCTACTTGAAGCGGAAAGTGGAAAGCCAGAAGGAAGG
TCAGTTGTCCTTCCTCAAGTCCAATGCAGGCTCGGTGATTGACCAGCTCG
ATACGCTGATGAACATCCGAGACAAGCTACAGGAGGATGTCAAGCTACAC
GGCAATGAGACCCTAAATATCTTGGAAACATCCATAGAGAACTCCATTAG
CGAATCGCAAAAGATATTCACGGATGTGCTGGTGCGCAAAGAGAAGGCGG
ATTCCACGCGGTCCGTTCTGTTCGCCCTGTCGCGGCACAAGTTCCTCTTC
TGTCTGCCCAATTCGGTGGACAGACGTGCCAAGGCGGGTGAATATGACAT
TGTGGTTAACGACTACTCGCGCGCCAAGAACCTCTTTGGCAAGACGGAGA
TTCCCATTTTCCGCAAGGTGCTCGAGGAGGTCGACCACAGGATTCTGTCA
ATAAGGAAACAACTGCACGAGAAGGTGGTCAAGATGCCACAGAGCGTGGA
GCAACAGAAGAAGCTCATCAAGGCGCTGATCAGTCTGGAACTGCAGCAGA
GCGGAACTCCCATTGGCGATAAACTGCGCAACATCGATCCCGCCTGGGAT
GCCATCGAGGCCAGAGCCAAATATCTGGAGTGGACATTTCGCCAGACATT
TGATCAGCACACCAGCAAGGATTCGGGTGCCCAGGAAAAGGCAAAGAACA
GGGATTCCAGCCAGGCGCCCAATCGGGTTAACTTCTGCGAAGAACTGTGC
GACATTGCCGCCTCCCAGCTGCCGGACTTGTGGCGTCTGGGCCAGCTATA
CTTCACCGGCGAGCTACGCGGACCTCATGATCCCAAGCCAGGGGATTTCA
AGCGAATGGTTTTGAACGCCATCGAGAAGTTCTGTGTCTACTTGAGGTTG
GCCATTCTCATTGCCACGGATCAGCGCGCCCTGCGTCAGTCCAGCGGCTT
GGCTTGGCCCATCGGCTCCGCATCGGCAACACATCAGTTTCTACCCTGGA
TTCCGCAGTGCCTGCGTTTCACGAGGATAGCCTATGCCACGCTCATCAGC
CTGGATCTGCCCTCGGAAGCGCTGGACATCATACAGAAACTGATCGATGA
GGTGCGACTTTTCTGCTTCTCAATTATCTTCAAACGGGCCACGGATCGGT
GCAAAAAGCTGGGCAGCCAGGAGACCTGGGAACTGGGCGTGGAGGAATAT
CCAGGTGCCACATTGTTACCCGCCGCCTTGGAAACATTGCTCATCGAAAC
GCTGGACGAGGTGCAATCTGTGTGCATGCAAAGGGAGACCCGGGAGGGCA
ATCTCCTCGAGCCGCAGTCGGATGGACAGAGAGAGGTGACACAGCGACTA
CAAGAATTCCTATCCGCGTTTAGCGCGGTGATCGAGGAGCTGGCCTTCCA
CTCCCACGACGAGGAGACGCCCACCCACAATGTGTCGCAGCTACTTGGAT
TCCCCAATGCCCAGCAGCCAGATTCGGTGGCTGGAAGCGGCGGAGCAGCG
GCTGTGACCTGGGAGCAGCGCATGCTCTGTTGCCTGGCCAACTATGCGTA
CTGCAACAAGATCTTCTTCCCGCGCCTTGGTGACATCTTCGTTCGCTACG
GTTACCCGCTGCCCACGCTGGCAATCGAAACTGCTCGCTACACGGTTAAC
CAGCTCTTTACCAATCTTCTGGAGGAGTACGTCGAGCATAAGGGCGATCC
GCTGGTCGGCACCATCGAGCCCTCCATGTATCTGGGTCGTTTCCAGTGGG
ATCACGAGATGGAGATCGGCCAGCTGCGTCCTTACGCTCACGAGTGCTGC
GATAATTTGGTTGGTGTCTACTCCGAGATCTACAGCATTTCACCGGCACT
GCTGCGACCCATCTTGGAGTCCATTGTGCAAACGATATCCGAAGAGCTGG
CCCGTCTGATGAGCTGTGTCCAGCGCTTTAGCTTCACGGGAGCGATTCAG
GCCCACGTGGATATCCGTCTATTGAGGGACTCCCTGGAAGGTTACGTCAA
TGAGACTGCCAAGAACTACTTCATGGAAGCGCTGGAGGCCATCAATCCGC
CCCTGAGTGGCGAGCAGAAGCGTAAGGCGGACGAGATTCTGGAGCGGGTC
AAGCGGAACATGCGTCTGCAGCTGCTCTGCTTCAGTGTCAAGGACCCCTA
GAAGCTTTCTAGACCAT
BS31155.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:05:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sec5-RA | 2685 | CG8843-PA | 1..2685 | 17..2701 | 13365 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:05:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sec5-RA | 2885 | CG8843-RA | 105..2789 | 17..2701 | 13365 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:05:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3458254..3460076 | 741..2563 | 9085 | 99.9 | Plus |
| 2L | 23513712 | 2L | 3457584..3458199 | 125..740 | 3050 | 99.7 | Plus |
| 2L | 23513712 | 2L | 3460133..3460271 | 2563..2701 | 695 | 100 | Plus |
| 2L | 23513712 | 2L | 3457406..3457516 | 17..127 | 555 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:05:35 has no hits.
BS31155.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 10:23:41 Download gff for
BS31155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sec5-RA | 78..2762 | 17..2701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:14 Download gff for
BS31155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sec5-RA | 105..2789 | 17..2701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:56:56 Download gff for
BS31155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sec5-RA | 105..2789 | 17..2701 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:56:56 Download gff for
BS31155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3460133..3460271 | 2563..2701 | 100 | | Plus |
| 2L | 3458254..3460075 | 741..2562 | 99 | -> | Plus |
| 2L | 3457406..3457514 | 17..125 | 100 | -> | Plus |
| 2L | 3457585..3458199 | 126..740 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:14 Download gff for
BS31155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3457406..3457514 | 17..125 | 100 | -> | Plus |
| arm_2L | 3457585..3458199 | 126..740 | 99 | -> | Plus |
| arm_2L | 3458254..3460075 | 741..2562 | 99 | -> | Plus |
| arm_2L | 3460133..3460271 | 2563..2701 | 100 | | Plus |
BS31155.pep Sequence
Translation from 16 to 2700
> BS31155.pep
MAPQPVVTGLSPKEGPPGTRVIIRGEFLGTRVQDLIGLKICGSDCLLSAE
WKSPNKIIARTGPAKGKGDIIVTTLSGGVGTSTVQFRAYHETIGPLKESA
VWIEESPSQNFAWGRRTLAQSGLTQEDPLGLSIEGNEQKIPEDLRDLFPE
ACGDLSQEHFSPAWFLLENHLATSFEDLKAGLSYLKRKVESQKEGQLSFL
KSNAGSVIDQLDTLMNIRDKLQEDVKLHGNETLNILETSIENSISESQKI
FTDVLVRKEKADSTRSVLFALSRHKFLFCLPNSVDRRAKAGEYDIVVNDY
SRAKNLFGKTEIPIFRKVLEEVDHRILSIRKQLHEKVVKMPQSVEQQKKL
IKALISLELQQSGTPIGDKLRNIDPAWDAIEARAKYLEWTFRQTFDQHTS
KDSGAQEKAKNRDSSQAPNRVNFCEELCDIAASQLPDLWRLGQLYFTGEL
RGPHDPKPGDFKRMVLNAIEKFCVYLRLAILIATDQRALRQSSGLAWPIG
SASATHQFLPWIPQCLRFTRIAYATLISLDLPSEALDIIQKLIDEVRLFC
FSIIFKRATDRCKKLGSQETWELGVEEYPGATLLPAALETLLIETLDEVQ
SVCMQRETREGNLLEPQSDGQREVTQRLQEFLSAFSAVIEELAFHSHDEE
TPTHNVSQLLGFPNAQQPDSVAGSGGAAAVTWEQRMLCCLANYAYCNKIF
FPRLGDIFVRYGYPLPTLAIETARYTVNQLFTNLLEEYVEHKGDPLVGTI
EPSMYLGRFQWDHEMEIGQLRPYAHECCDNLVGVYSEIYSISPALLRPIL
ESIVQTISEELARLMSCVQRFSFTGAIQAHVDIRLLRDSLEGYVNETAKN
YFMEALEAINPPLSGEQKRKADEILERVKRNMRLQLLCFSVKDP*
BS31155.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:21:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sec5-PA | 894 | CG8843-PA | 1..894 | 1..894 | 4625 | 100 | Plus |
