BS31161.complete Sequence
710 bp assembled on 2012-07-13
GenBank Submission: KX804309
> BS31161.complete
GAAGTTATCAGTCGACATGACTCGAAAACAAATTGCTACGCCCCGCTGTG
AAACTATCTCCAAATTGGTGGTCAGCGTCGGCAGTGGCGAAACTTTTCTT
ACTTATGCAGATGCTACAACACGATCCTTCTGCGCGAATCCCTCGTGGCT
GAACTTTCAAAATGGCATGATGGAAGTGGGGCCGATTAGTAAACCGAATC
CCCATGATTCTCAAAAGGAGGCAACCTCATTTCTGGAGCGACATTTCGGA
AGCAAGCGTCTGGACTCCGAGCAAATGAACGCGGAATTTAAGAACAGGAA
GACGATTATCTGGCACACTTGGCTGGTGGAGAAGGTGCGGTTTCCTCCAG
CTCAGTGTGCGGTCATCAAGGAATGGAAGGATCCAATCACGGAGACTCTG
GGCATTTGCTATTGTTCCTGGCACTTGCAGAGCTGCATGGCCTGGCAGCT
TATTCTCAGTAATCGAATGACGGATGCCAAGTGCTTCTGTTCGCGAATCA
AGAAAACGATGGACATTGTCAACTGTCTCGTTGACTCGGAAGTGGAACAG
GAGAAAACATTTAAGGATTGTTCTTCCCCCTTAGCCGTGTTAACCGAGAA
AGTGCTTGATGCCACTGATATGCTGAAGAAACTGAATGATCTTCTAGAGC
TCCAGGAGAAACTCAATCGGAAATACAAACGCCTGTGTGTATAGAAGCTT
TCTAGACCAT
BS31161.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:44:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30461-RJ | 678 | CG30461-PJ | 1..678 | 17..694 | 3360 | 99.7 | Plus |
| CG30461-RI | 678 | CG30461-PI | 1..678 | 17..694 | 3360 | 99.7 | Plus |
| CG30461-RK | 528 | CG30461-PK | 1..528 | 167..694 | 2610 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:44:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ste24c-RC | 2251 | CG9002-RC | 1473..2153 | 16..696 | 3375 | 99.7 | Plus |
| CG30461-RJ | 2251 | CG30461-RJ | 1473..2153 | 16..696 | 3375 | 99.7 | Plus |
| CG30461-RI | 861 | CG30461-RI | 83..763 | 16..696 | 3375 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:44:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16996356..16996752 | 483..87 | 1955 | 99.5 | Minus |
| 2R | 25286936 | 2R | 16996089..16996302 | 696..483 | 1070 | 100 | Minus |
| 2R | 25286936 | 2R | 16996992..16997063 | 87..16 | 360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:44:24 has no hits.
BS31161.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-13 13:56:27 Download gff for
BS31161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30461-RD | 67..744 | 17..694 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:13 Download gff for
BS31161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ste24c-RC | 1474..2151 | 17..694 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:22 Download gff for
BS31161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30461-RI | 84..761 | 17..694 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:22 Download gff for
BS31161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16996091..16996301 | 484..694 | 100 | <- | Minus |
| 2R | 16996356..16996751 | 88..483 | 99 | <- | Minus |
| 2R | 16996992..16997062 | 17..87 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:13 Download gff for
BS31161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12883596..12883806 | 484..694 | 100 | <- | Minus |
| arm_2R | 12883861..12884256 | 88..483 | 99 | <- | Minus |
| arm_2R | 12884497..12884567 | 17..87 | 100 | | Minus |
BS31161.pep Sequence
Translation from 16 to 693
> BS31161.pep
MTRKQIATPRCETISKLVVSVGSGETFLTYADATTRSFCANPSWLNFQNG
MMEVGPISKPNPHDSQKEATSFLERHFGSKRLDSEQMNAEFKNRKTIIWH
TWLVEKVRFPPAQCAVIKEWKDPITETLGICYCSWHLQSCMAWQLILSNR
MTDAKCFCSRIKKTMDIVNCLVDSEVEQEKTFKDCSSPLAVLTEKVLDAT
DMLKKLNDLLELQEKLNRKYKRLCV*
BS31161.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30461-PJ | 225 | CG30461-PJ | 1..225 | 1..225 | 1203 | 100 | Plus |
| CG30461-PI | 225 | CG30461-PI | 1..225 | 1..225 | 1203 | 100 | Plus |
| CG30461-PK | 175 | CG30461-PK | 1..175 | 51..225 | 940 | 100 | Plus |
