Clone BS31166 Report

Search the DGRC for BS31166

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:311
Well:66
Vector:pDNR-Dual
Associated Gene/TranscriptCG6115-RA
Protein status:BS31166.pep: full length peptide match
Sequenced Size:290

Clone Sequence Records

BS31166.complete Sequence

290 bp assembled on 2012-07-13

GenBank Submission: KX805911

> BS31166.complete
GAAGTTATCAGTCGACATGTCACAGCTGCGCTCGAAAGTCATTAGCCTCT
ACAAGCACTTGCAGTATTTGGGCCGCGAATATCCCGGCCTGAACGGGCCG
CAGAAGTTCAGGAAGCAGATCCACGATGCCTTCATGAACCACAAGGACGA
GCAGGATCCCAAGAAGATCGTCGCCCTGCTAGCCCAAGGACGTTACTTGG
CCAAGGAGGTGGAGGCCCTGTACTCGCTGAAGAAGTACCGAAGTGTCAAG
CAGCGCTATAGTTACAATGACTAAAAGCTTTCTAGACCAT

BS31166.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:44:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG6115-RB 258 CG6115-PB 1..258 17..274 1290 100 Plus
CG6115-RA 258 CG6115-PA 1..258 17..274 1290 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:44:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG6115-RB 743 CG6115-RB 133..390 17..274 1290 100 Plus
CG6115-RA 727 CG6115-RA 133..390 17..274 1290 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:44:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16887462..16887681 274..55 1085 99.5 Minus
2L 23513712 2L 16887793..16887834 58..17 210 100 Minus
Blast to na_te.dros performed on 2014-11-28 11:44:29 has no hits.

BS31166.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-13 13:56:28 Download gff for BS31166.complete
Subject Subject Range Query Range Percent Splice Strand
CG6115-RA 129..384 17..272 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:15 Download gff for BS31166.complete
Subject Subject Range Query Range Percent Splice Strand
CG6115-RA 133..388 17..272 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:24 Download gff for BS31166.complete
Subject Subject Range Query Range Percent Splice Strand
CG6115-RA 133..388 17..272 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:24 Download gff for BS31166.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16887464..16887677 59..272 100 <- Minus
2L 16887793..16887834 17..58 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:15 Download gff for BS31166.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16887464..16887677 59..272 100 <- Minus
arm_2L 16887793..16887834 17..58 100   Minus

BS31166.pep Sequence

Translation from 16 to 273

> BS31166.pep
MSQLRSKVISLYKHLQYLGREYPGLNGPQKFRKQIHDAFMNHKDEQDPKK
IVALLAQGRYLAKEVEALYSLKKYRSVKQRYSYND*

BS31166.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG6115-PB 85 CG6115-PB 1..85 1..85 441 100 Plus
CG6115-PA 85 CG6115-PA 1..85 1..85 441 100 Plus