BS31221.complete Sequence
1013 bp assembled on 2012-07-13
GenBank Submission: KX805869
> BS31221.complete
GAAGTTATCAGTCGACATGGTTGTCTGCCGGTTCTTTCAACAAGGCTCCT
GCCGCTATGGCGCAAAGTGCAACAACGAGCATTTCGATGTTAAGCAATAT
CTCAAAGCCGACATGGAATCCAGCCTCAATGGCAAGATGTGGCCTTTGTC
CGCCTACGGACCCTTTAAGGACAAAGCGAATTTCCCCAACTTTATTCAGG
ACCAATCCTTCGAGGAGGTGCGGTTCATGTGTTACGAGGCCAAACGACAA
AACCAATTCGAACAGTTCAGCCAACAGTTTAACCGTGAGGTCCTAGAGGC
TAACAACAAGATGAAGACCATGCTTCAGATGTCGCCGCAGGTCCTGGAAA
TGATGATCAAGATCCACGAGACGCCGGAGGGCGGCACTGTGTCGGCTGCC
CCTCAGCAGTCCAGTAATCCCTTCGCTGCAGCAGCTCCGGCTGCCGCCAA
TACATCTGCATCCATTTTTGGAAAGCCCACGCTGAGTGCGGGAAATATAT
TTGGGAATGCCACAAGCCAAGCCAGCAACACCAATAGCATTTTCGGCGGA
ACGATTAGCAATGCCAATGCAAGGAATAGCATTTTTGGTGTAGGAGCTGC
GGCAACAGGTGCACAAAGTGTCTTTGGACAGCCACAGCAGCAACAGCTGC
AGCCTGCTGCACAAGCTTTCCAAGGGGGCAACATTTTCGCCCAGGCGCAG
GTTCAGGTGCAAGCTCAGCCAGTGAATCCTAATCCTTTCGGTGGTTTCCA
ACAGCAGCAGCAGCAACCGCAGTCGACGGGAATCTTTGGCCAAGCCGCAA
GCCAAAATATGGGCGGAATGTTTACTCAGGCTTCTCAGCAACTACAACAG
CAGCAGCAGGCAGCTGCCTCCGGATTATTTGCTCAAGCAGCAGCATCTGC
ATTCCCTAATCAACAACAGATGCAGCAGCAGCAACAGATGCAGCAGCAGC
AACAGATGCAACAGCAACAAATGCATCAGCAGCAGCAGATGCAATAGAAG
CTTTCTAGACCAT
BS31221.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:44:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18787-RB | 1197 | CG18787-PB | 1..981 | 17..997 | 4905 | 100 | Plus |
| CG18789-RA | 1197 | CG18789-PA | 1..978 | 17..994 | 4875 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:44:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18787-RB | 1386 | CG18787-RB | 113..1093 | 17..997 | 4905 | 100 | Plus |
| CG18789-RA | 1389 | CG18789-RA | 116..1093 | 17..994 | 4875 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:44:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11998193..11999100 | 997..90 | 4525 | 99.9 | Minus |
| 2L | 23513712 | 2L | 11994285..11995189 | 994..90 | 4495 | 99.8 | Minus |
| 2L | 23513712 | 2L | 11995240..11995317 | 94..17 | 390 | 100 | Minus |
| 2L | 23513712 | 2L | 11999151..11999228 | 94..17 | 390 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 11:44:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6699..6893 | 813..1001 | 329 | 66.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2473 | 836..996 | 283 | 65.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2418..2673 | 749..1001 | 238 | 58.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2811..2974 | 836..1005 | 217 | 61.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6821..6985 | 836..1012 | 207 | 62.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6842..7079 | 749..992 | 142 | 56.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2349..2542 | 749..936 | 127 | 57.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6681..6891 | 550..771 | 120 | 55.4 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 6603..6727 | 836..969 | 115 | 60.4 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 8059..8183 | 836..969 | 115 | 60.4 | Plus |
BS31221.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-13 13:56:30 Download gff for
BS31221.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18787-RA | 90..1070 | 17..997 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:21 Download gff for
BS31221.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18787-RB | 113..1093 | 17..997 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:28 Download gff for
BS31221.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18787-RB | 113..1093 | 17..997 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:28 Download gff for
BS31221.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11998193..11999096 | 94..997 | 100 | <- | Minus |
| 2L | 11999152..11999228 | 17..93 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:21 Download gff for
BS31221.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11998193..11999096 | 94..997 | 100 | <- | Minus |
| arm_2L | 11999152..11999228 | 17..93 | 100 | | Minus |
BS31221.pep Sequence
Translation from 16 to 996
> BS31221.pep
MVVCRFFQQGSCRYGAKCNNEHFDVKQYLKADMESSLNGKMWPLSAYGPF
KDKANFPNFIQDQSFEEVRFMCYEAKRQNQFEQFSQQFNREVLEANNKMK
TMLQMSPQVLEMMIKIHETPEGGTVSAAPQQSSNPFAAAAPAAANTSASI
FGKPTLSAGNIFGNATSQASNTNSIFGGTISNANARNSIFGVGAAATGAQ
SVFGQPQQQQLQPAAQAFQGGNIFAQAQVQVQAQPVNPNPFGGFQQQQQQ
PQSTGIFGQAASQNMGGMFTQASQQLQQQQQAAASGLFAQAAASAFPNQQ
QMQQQQQMQQQQQMQQQQMHQQQQMQ*
BS31221.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18789-PA | 398 | CG18789-PA | 1..326 | 1..326 | 1679 | 100 | Plus |
| CG18787-PB | 398 | CG18787-PB | 1..326 | 1..326 | 1679 | 100 | Plus |
| Wnk-PN | 2441 | CG7177-PN | 1044..1166 | 205..326 | 180 | 42.7 | Plus |
| Wnk-PL | 2441 | CG7177-PL | 1044..1166 | 205..326 | 180 | 42.7 | Plus |
| Wnk-PM | 2462 | CG7177-PM | 1044..1166 | 205..326 | 180 | 42.7 | Plus |
