BS31222.complete Sequence
1694 bp assembled on 2012-08-31
GenBank Submission: KX802312
> BS31222.complete
GAAGTTATCAGTCGACATGTCGCCAGTCATCCGCCGTAATCTTATCGCCT
GTCTCACTTTGGGCCTGTGCGTCTGTCTTAGCTTCGGACCGGGTCCGGTG
GAATCACGCACTCGCCCGAAGAACCAGGTTGATAGAAAGCTGTTGACGAT
CTACGGCAGCACGCCCCACGTGGAAGCCCTTCTGGGTCCAGGTCGTCCCA
CGCCGGATACCTACAAGACGTTGAGAAGCGCCTTTTTCCGGTACGAGGAA
TCACGCTCATTGGGCCATGACCTGGATCTAAATAGCAGAGAAATTAAGGC
TAACGAAACCATTATGAAGGCCAAATTAAAGGAGTTTGACGAAGGCCTGG
TTACCCCTCACCTCTTCAAGCCCTCACAGCACATATTTGATGTGTTGGAC
GGCATCCGGAACACCGATCTCTTCAAGCTGCTGAAAAAGATGCCCAAGGG
CGCGGTTCTTCATGCCCACGATACGGCGCTCTGCAGCACAGCGGCCATTA
TCAACCTGACCTACTATGAGCATCTCTGGTCCTGCCAGCAGGACGGAGAT
CTTAGCGCCTCCGCCCTAAGGTTTTCCAAGGATAAGCCACAGGCCCTCAG
TGACTGCGATTGGAGTCTGCTCTCCGATGTGCGAGCCAAATACGGAGCTG
ACAAGGTCGATGACTATCTGGCCGAGAGACTCACACTGTATCCAACCAAG
AAGTTTGAGGACAACAATGCCGCCTGGTCCACGTTCATGTCCATTTTCAA
TCTGCTCGACGGTCTGGTGATGTACGCCCCCGTCTGGGCGGACTACTACT
ACAAAGCGCTGGAGGAGTTCTACGAAGATGGTGTTCTATACTTGGAATTC
CGATCAGTTGTTCCCACGCTATATGACATGGATGGAACGGAGTTTACTCC
TATGGATACTGTGCGCATTTATGTGGAAACCTTGGAGAAGTTCAAGGAGG
CTCATCCAGATTTCATTGGTTCAAGGATGATCTATGCTCCTATACGTTAT
ACGAATGCAGAGGGCGTAACTGGCTATATCCAAACCCTTAAACAAATAAA
GGAAAAGTACCCGGAATTTGTAGCTGGTTTCGATTTGGTGGGCCAGGAGG
AGATGGGACGTCCTTTGAGGGACTTTGTCGACGAATTATTATCTATCCCC
GATGACATTGATTTCTACTTCCACGCCGGAGAAACAAACTGGTTCGGTTC
CACTGTGGATGAGAACCTGATCGATGCCATTTTGCTGGGCACAAAGCGTA
TTGGTCATGGATTCGGACTGGTCAAACATCCCGTGGTGCTGGACATGCTG
AAAAAGCTGAATGTGGCCATTGAAGTGAATCCGATTTCGAATCAAGTGCT
CCAGCTGGTCTCTGACTTCCGCAACCATCCGTGCTCTCACTTCTTCGCCG
ATGGCTATCCAGTGGTTATATCCTCGGATGATCCCTCCTTCTGGAAAGCC
ACTCCCCTGACGCATGACTTCTATATCGCCTTCTTAGGAATCGCCTCGCA
GCACTCCGACTTGCGTCTGCTGAAGAAGTTGGCCCTAAATTCGATACAAT
ATAGTTCTCTGACGGGAGACGCCCAGTTCGAGGCGCTGGAAAAGTGGCAG
GTTAAATGGGACCAGTTCATCGCCGATGTCAATGATCGTTCCTCCAACCG
GGGATCCCCCAGTCAACGGATCGATTGAAAGCTTTCTAGACCAT
BS31222.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:54:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adgf-A-RB | 1662 | CG5992-PB | 1..1662 | 17..1678 | 8310 | 100 | Plus |
| Adgf-A-RA | 1662 | CG5992-PA | 1..1662 | 17..1678 | 8310 | 100 | Plus |
| Adgf-B-RA | 1563 | CG5998-PA | 346..397 | 440..491 | 185 | 90.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:54:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adgf-A-RB | 2584 | CG5992-RB | 200..1862 | 16..1678 | 8315 | 100 | Plus |
| Adgf-A-RA | 2588 | CG5992-RA | 204..1866 | 16..1678 | 8315 | 100 | Plus |
| Adgf-B-RA | 1694 | CG5998-RA | 441..492 | 440..491 | 185 | 90.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:54:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17753467..17754319 | 868..16 | 4265 | 100 | Minus |
| 3L | 28110227 | 3L | 17752453..17753081 | 1678..1050 | 3145 | 100 | Minus |
| 3L | 28110227 | 3L | 17753134..17753318 | 1052..868 | 925 | 100 | Minus |
| 3L | 28110227 | 3L | 17750097..17750148 | 491..440 | 185 | 90.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:54:49 has no hits.
BS31222.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-31 15:09:15 Download gff for
BS31222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adgf-A-RB | 196..1856 | 17..1677 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:02 Download gff for
BS31222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adgf-A-RA | 205..1865 | 17..1677 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:16:41 Download gff for
BS31222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adgf-A-RA | 205..1865 | 17..1677 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:16:41 Download gff for
BS31222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17752454..17753079 | 1052..1677 | 100 | <- | Minus |
| 3L | 17753135..17753317 | 869..1051 | 100 | <- | Minus |
| 3L | 17753467..17754318 | 17..868 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:02 Download gff for
BS31222.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17745554..17746179 | 1052..1677 | 100 | <- | Minus |
| arm_3L | 17746235..17746417 | 869..1051 | 100 | <- | Minus |
| arm_3L | 17746567..17747418 | 17..868 | 100 | | Minus |
BS31222.pep Sequence
Translation from 16 to 1677
> BS31222.pep
MSPVIRRNLIACLTLGLCVCLSFGPGPVESRTRPKNQVDRKLLTIYGSTP
HVEALLGPGRPTPDTYKTLRSAFFRYEESRSLGHDLDLNSREIKANETIM
KAKLKEFDEGLVTPHLFKPSQHIFDVLDGIRNTDLFKLLKKMPKGAVLHA
HDTALCSTAAIINLTYYEHLWSCQQDGDLSASALRFSKDKPQALSDCDWS
LLSDVRAKYGADKVDDYLAERLTLYPTKKFEDNNAAWSTFMSIFNLLDGL
VMYAPVWADYYYKALEEFYEDGVLYLEFRSVVPTLYDMDGTEFTPMDTVR
IYVETLEKFKEAHPDFIGSRMIYAPIRYTNAEGVTGYIQTLKQIKEKYPE
FVAGFDLVGQEEMGRPLRDFVDELLSIPDDIDFYFHAGETNWFGSTVDEN
LIDAILLGTKRIGHGFGLVKHPVVLDMLKKLNVAIEVNPISNQVLQLVSD
FRNHPCSHFFADGYPVVISSDDPSFWKATPLTHDFYIAFLGIASQHSDLR
LLKKLALNSIQYSSLTGDAQFEALEKWQVKWDQFIADVNDRSSNRGSPSQ
RID*
BS31222.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:26:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adgf-A-PB | 553 | CG5992-PB | 1..553 | 1..553 | 2918 | 100 | Plus |
| Adgf-A-PA | 553 | CG5992-PA | 1..553 | 1..553 | 2918 | 100 | Plus |
| Adgf-B-PA | 520 | CG5998-PA | 36..514 | 62..538 | 1363 | 52.6 | Plus |
| Adgf-E-PA | 539 | CG10143-PA | 46..526 | 60..538 | 1327 | 49.7 | Plus |
| Adgf-D-PA | 502 | CG9621-PA | 13..497 | 52..538 | 928 | 40.1 | Plus |
