Clone BS31333 Report

Search the DGRC for BS31333

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:313
Well:33
Vector:pDNR-Dual
Associated Gene/TranscriptCG31347-RA
Protein status:BS31333.pep: full length peptide match
Sequenced Size:464

Clone Sequence Records

BS31333.complete Sequence

464 bp assembled on 2012-07-13

GenBank Submission: KX802163

> BS31333.complete
GAAGTTATCAGTCGACATGGAATCCTTTAGTGTGCCGGAAGTGGACATGA
TGACCGTGTCAAAGAATTCGCAATACGAACGGGAATCGCTACTAAAGTTC
GCACCGCCAGTTGGACTGACCAACATCAGCTACGGCAGCTTGTACAAGGT
GGACTCCTTCTATTTGGAGTGCCAGAAGTACCGAGATCAATTCCGCGATC
CCTACAACAAGCTGCTGCGCCCCAAGATGTTCAGCACATACAGGGGCAAG
TGTGGTGTGAAGATAGATCCCGAACTGGAGCGCTTAAAGCGACCCGCTGC
CTCCCATGTGGAGTCTATTCCCGTGGTTTACCCAATGGAGTACGGGCACC
AAATGGACTTCGACAGAGGCTTCCAGATGCAGGGACGCAACAGCAGGGAT
GCAGCCACCGCCCGCAGATATCCGTGTGTGCGTGTGCTGGGCAGATAAAA
GCTTTCTAGACCAT

BS31333.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:44:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31347-RA 432 CG31347-PA 1..432 17..448 2160 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:44:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG31347-RA 865 CG31347-RA 41..480 10..449 2185 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:44:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12692118..12692557 449..10 2185 99.8 Minus
Blast to na_te.dros performed on 2014-11-28 11:44:50 has no hits.

BS31333.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-13 13:56:32 Download gff for BS31333.complete
Subject Subject Range Query Range Percent Splice Strand
CG31347-RA 48..477 17..446 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:22 Download gff for BS31333.complete
Subject Subject Range Query Range Percent Splice Strand
CG31347-RA 48..477 17..446 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:29 Download gff for BS31333.complete
Subject Subject Range Query Range Percent Splice Strand
CG31347-RA 48..477 17..446 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:29 Download gff for BS31333.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12692121..12692550 17..446 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:22 Download gff for BS31333.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8517843..8518272 17..446 100   Minus

BS31333.pep Sequence

Translation from 16 to 447

> BS31333.pep
MESFSVPEVDMMTVSKNSQYERESLLKFAPPVGLTNISYGSLYKVDSFYL
ECQKYRDQFRDPYNKLLRPKMFSTYRGKCGVKIDPELERLKRPAASHVES
IPVVYPMEYGHQMDFDRGFQMQGRNSRDAATARRYPCVRVLGR*

BS31333.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG31347-PA 143 CG31347-PA 1..143 1..143 758 100 Plus
CG13110-PA 133 CG13110-PA 3..113 6..117 262 44.6 Plus
CG14391-PA 135 CG14391-PA 3..132 4..132 262 38.5 Plus
CG43796-PA 127 CG43796-PA 1..96 11..106 249 44.8 Plus