BS31338.complete Sequence
3485 bp assembled on 2012-07-30
GenBank Submission: KX804509
> BS31338.complete
GAAGTTATCAGTCGACATGAATACCAAAAACATTGAAAACAAACCCATGG
ATGGGACCAAATTTCTTGATATGTTGTCAAAAATATCATTGGAGGAAATA
TTACAACTTGAATTCCGTAACAATCCAACTAGCAAATGGGAAACATTGGT
AACCCCCTCATACCCGCTTCGGAAATACAATTGTAATATTTGCCGTGTTG
TTCAGTTCGGCGACAAAAATTTGTTTAGCCACCTTAGTGGTAAAAAACAT
ATTGCCGTAATGAAACTCAAAGAGCAATTGCAAATAAGAAACAAGCCCAG
TGTAGCTCCACCCACAAAAAAGGGCCCTAACACCAATGCGAATAATAACA
AAAACAGTCAATCTCCTGCTGTTAAAAATTTGCCAATTATAAACAAAAAT
GTACCAAATCAAAATAATAATGCAAACACTAACGTTGTTAAGCAGGCAGC
TGGAAATGAAGTTGCAAAAACACAGCCGACGCAAAATAAAAAACCTGCAA
TGGGCGGTAAAACGAAAAGCACTGCTACCCCTAAGGTAGTAAATAATCCA
AACACTCAAAAAAATATTCAGAATAGCACAACAAACATTCAAAAGAATGT
GCCAGAAAACAGTCCACCCAATCAAAAGAATACATCAGTAAATAATACGC
CTGTTAAGAAAAACACAGGGAATAATGCACCCGTACAAACGAGTGTTCCT
ATTATTGGCGCAAACGCGAAGAAAAGACCTAACCCAAACCCGGGAAATAT
TCAAGCCAAGAAGGCAAATGTGAATGCGGCCAACGCAAATAACACTGCTA
ATAAAAAGGCTCCACAGTCTGCAATGAATACAGCGAAAACTTCACAGAAT
TCTGGAGGTCCTGCTCCAAAAACTACTGTGAGCAATACTACTTCTCAGCA
AGCAGTAAATGTTCAGATTGAAAAGCAACCATTAGAGCAAACAAAGCCAA
CTGTTCAAATTCCCTCACAGACTCCATCAAAGCCACAGTCGACGAAAGCT
GTGCAGAATGCTAAATCGAATAACGCGGACTTGGCTCGCAGCAAAACGAC
TGATCCAGATATAGTCAAAAATCCGCTTGCCACGAAAATATCTTGTGTTC
CGCTAGCCAAGCTTATAAACTCTACACCAGAGCGCGAGAAAGATCTCGTA
ATCATTGACGATTTGCCAAAAGAGGCTACAAAACCGCCAGAAACACCGAA
AAAACCCATTCCAGTTCAAACGTCAAACCCGAAGCCTGTTATTGCGGCCA
AGAAGCCAATCAATGTTGTTGCACAACCTGTGCGCCCTACTATCAATAAG
GTAGTTAAGCCTTCATATGTTGCACCCAAGGATTACACAACAGCTAGACC
TGGTGGCACATTTGAATCCAGGAAAGGTCATGTCATGGGTCTCGTTGGGG
TAGAGTACGTTTTGAAAATAGTTAAGACCTTGGCTGACAACAATGCCAGA
TATCAATGTTGCCTCTGCGAGATCACTGCTGATGAGCAATCCATGCACAA
CCATTTGCTTGGCTATAACCACCGTTTAAAGTATTTTGACAAGCATTTCC
CCACTGCAATGCGTCTGTACCGTCAGTATGTGTCCCATGTTCCGGAGAGC
GAGGTGTGCAAAATAATGATGCCCATTTTTGATAAGCTTGCACATGCCAT
TGAAACGCACCATGGTCGAAAAAACGCCCATCTGTGCTATGAACATGTCT
ATTCGAAAGATCGCCAGAGTTTGTTCACCCAGGTATACAATAGAAAGCAC
TCGTCTGAAAAGATTGGGCCTTTGTTCACCCACGTCGTAGATGCTAAAGA
GGTGGAGGAGTTGATCGACAAGATTAGAACCAACGTTCAGCCCTTGATAA
ACGTTGAAAATTCGAATCCTTACTACGTCCCTCCATACGTACCACAGTAT
GCGGGCTATCAGAATGTGCCCCAAAATAATACAGCACCCCCTATTGATGA
TGAAACTCACAAGCGAATGGTCGATAATTTTCTTAGGGACACCAGACATG
GTTCGGGCGATGCACAGAAGTCCCGGAACGCAAAGCGGAACCGCTCAAGA
TCCAAATCACCTGATCAAAGAAAGAGGGTCGCCCCCAAAAGGCACTGGAA
TGTGGAGCGTAGGTCAGTGTCGCCTTTGCGCGATGGCGACATTTGGCAGG
CGTACCGTCACATGGTAGATCTCAAGGTGCGTGAGCTAAACGTGTCCTTC
GACACATACAAATCTGATCCCGAACAGCATCCGAGTTATCAAGCTGAGTG
GCAAATGTTTTGGAAGCGCCGCAAGGATGAGCTTATACTGGCTGGCATTA
ATCATCGCACGTACAACTTCCAAAACGAATGGATTAATTTCTTTAATGCT
CGTATCGAAGAATTGTACAGTCAAGATATTGAAAATATCAAAATAAAGTG
TCGCGAACGGCTATGTCTGCCAATGACCAATAACGAATTGGAGGACGAAA
AGTATCACGTTCATTTGGACAAAACTGATGAGCCCGATGATGAGCGCAGA
CCGGAATCTAGCATTGAACCGCAGAAAGTGTCTGTTGATGTAGAGACTCC
GGTTGAGGAGCCGCCGAATGTGATTCATGTCCTTCGTCTTTTAACTGCTT
TGGAGAATTATCTCGGAAGTCTGGGTCCTTTTGTTACCGAGATGCTAGTA
AAAGCTCTGCAATCGCAGAAGATTTGTCCACAAAAGTTGCATACTTCAAT
TTTAACAGCCGAAAACTGTGCTATTTTGGAGACCGTTAAAGAAAAATTTA
CTGGTCTCTTGATCTCCCATATTTATGATCCCGCTAAAGAAAGGGCTTTG
AAGAGAGCTATTAATGACACCGAACGGTTGCTTCAATGTGCCAGTAAACT
TAACAAATCCAAAGATATAGAGCAGCTCGCTGAGAAACCAGAGTTGCAGA
TAGCCAAAAACTTACCGCATAACCTCGATAAACCATTAGATAAAACTGAG
CTTGCGGCAAAACTGGCTTCTTCATTGGTGTCCCAAGGCAAAACATCTAT
AAACCGAGAGGAACTTCAAAAGATACTTCAGGTATATACGATGATTGAGC
AGAAGAAACGCCAGGACATCCCACTCTCAACCAGTTCCGTGAATTCAGTG
CCCAGCACTTCTACTAACTTGATTCCCAATTCCAATAACAATGATAATTT
GTTGACACAACATTCATCCAGAAATTTAAACAACAATCCGACCAGTGAGT
ATACTGGTCAAAACTACTCCGGAAATGTGGCTCGATTTAACAACCAACAA
AGCACTAACTTAGCTAACCCCTTCACTTCGAACGCGTATCCGACTGATCG
TGGATTTGGCGGATCCGGCGGATATAATAGTCAATTCGGCTCTAAACTAC
CGGCAATCAACCCAAGCAGCGTTTTGCGAAACGATCTGACAACGTCGTCA
CTCTTCAACTTCAACACCAATTTGAACCCATCTTATAACAACCTTAACCG
GAGGAATAATAATTTTTAAAAGCTTTCTAGACCAT
BS31338.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:11:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31510-RA | 3453 | CG31510-PA | 1..3453 | 17..3469 | 17265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:11:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31510-RA | 4289 | CG31510-RA | 478..3930 | 17..3469 | 17265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:11:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25117577..25121029 | 3469..17 | 17265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:11:05 has no hits.
BS31338.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 10:23:51 Download gff for
BS31338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31510-RA | 467..3917 | 17..3467 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:24 Download gff for
BS31338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31510-RA | 478..3928 | 17..3467 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:58:57 Download gff for
BS31338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31510-RA | 478..3928 | 17..3467 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:58:57 Download gff for
BS31338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25117579..25121029 | 17..3467 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:24 Download gff for
BS31338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20943301..20946751 | 17..3467 | 100 | | Minus |
BS31338.pep Sequence
Translation from 16 to 3468
> BS31338.pep
MNTKNIENKPMDGTKFLDMLSKISLEEILQLEFRNNPTSKWETLVTPSYP
LRKYNCNICRVVQFGDKNLFSHLSGKKHIAVMKLKEQLQIRNKPSVAPPT
KKGPNTNANNNKNSQSPAVKNLPIINKNVPNQNNNANTNVVKQAAGNEVA
KTQPTQNKKPAMGGKTKSTATPKVVNNPNTQKNIQNSTTNIQKNVPENSP
PNQKNTSVNNTPVKKNTGNNAPVQTSVPIIGANAKKRPNPNPGNIQAKKA
NVNAANANNTANKKAPQSAMNTAKTSQNSGGPAPKTTVSNTTSQQAVNVQ
IEKQPLEQTKPTVQIPSQTPSKPQSTKAVQNAKSNNADLARSKTTDPDIV
KNPLATKISCVPLAKLINSTPEREKDLVIIDDLPKEATKPPETPKKPIPV
QTSNPKPVIAAKKPINVVAQPVRPTINKVVKPSYVAPKDYTTARPGGTFE
SRKGHVMGLVGVEYVLKIVKTLADNNARYQCCLCEITADEQSMHNHLLGY
NHRLKYFDKHFPTAMRLYRQYVSHVPESEVCKIMMPIFDKLAHAIETHHG
RKNAHLCYEHVYSKDRQSLFTQVYNRKHSSEKIGPLFTHVVDAKEVEELI
DKIRTNVQPLINVENSNPYYVPPYVPQYAGYQNVPQNNTAPPIDDETHKR
MVDNFLRDTRHGSGDAQKSRNAKRNRSRSKSPDQRKRVAPKRHWNVERRS
VSPLRDGDIWQAYRHMVDLKVRELNVSFDTYKSDPEQHPSYQAEWQMFWK
RRKDELILAGINHRTYNFQNEWINFFNARIEELYSQDIENIKIKCRERLC
LPMTNNELEDEKYHVHLDKTDEPDDERRPESSIEPQKVSVDVETPVEEPP
NVIHVLRLLTALENYLGSLGPFVTEMLVKALQSQKICPQKLHTSILTAEN
CAILETVKEKFTGLLISHIYDPAKERALKRAINDTERLLQCASKLNKSKD
IEQLAEKPELQIAKNLPHNLDKPLDKTELAAKLASSLVSQGKTSINREEL
QKILQVYTMIEQKKRQDIPLSTSSVNSVPSTSTNLIPNSNNNDNLLTQHS
SRNLNNNPTSEYTGQNYSGNVARFNNQQSTNLANPFTSNAYPTDRGFGGS
GGYNSQFGSKLPAINPSSVLRNDLTTSSLFNFNTNLNPSYNNLNRRNNNF
*
BS31338.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:22:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31510-PA | 1150 | CG31510-PA | 1..1150 | 1..1150 | 6031 | 100 | Plus |
| CG7065-PA | 1231 | CG7065-PA | 558..758 | 817..1016 | 235 | 32.1 | Plus |
