BS31340.complete Sequence
1040 bp assembled on 2012-07-13
GenBank Submission: KX803943
> BS31340.complete
GAAGTTATCAGTCGACATGCCCCGCGTGAAGCCCACCAAGAAGCTCGATG
TTCTGGGAAATCTGGACCTGCGGCCGGAGGATGCCGTGGGGGACTATATC
AGCTCTAAGCAGCAGAACAAATTCTTCGTAATTCCACCGAACTCGGACTC
TGCCGGCGACTCCATCGAACTGATATATGTGAACAATCTCCGCGAGCACG
AAGCCATGCTCAAGCTGCAGGAGGAGATGCTGACCAGTGCCAAGCGGCAG
ACCAAGCTGAACTCCGCCCGGGTGAGGAACATGTACAAGATCCAGGAGCG
GCTGAGGCGGCGCTTCATCGAGGTGAACAGCTTCATCAAGGACTGCGCGG
ACAAAAAGAGAGTGGCCGAGAAGACCGCCCAAGCGGAGACGCTCAACCAT
AAGGAGCTCGGCGAGGGCATTGAGAGCTTCAAGGACTCGATCGGCGAACT
CAAGGCCTTTCGGGAGGCTCTCAAGGCCACCGTGCAGGAGTTCCAGCCCT
ACGAGAAGGTGCTCGACGAGGTGGTGAAGGTATCCGACATATTCGTCTCG
CCAAAGGACTGCACCGATCGCTGTGATGCGCTGATGCTGGCTCAAGTGGA
GATCAACAAGTTGGAGCATCAAAAGCTCCAGGACATCGAGAACATGCGGC
AGCGTATGGTGCAGATCACAAATGATGCGGCTCTAACTGTGCTGGGTCTA
AAGAACGATCTGGCCAAACTGGAACGATCCTACAACGAGTCCAGAGTGCA
GTGCCTCAGATGGGAGAAGATCCTGGCCAAGACCAAGGACGCCATCAACA
ACAACTACATGGACAAGGAGCGCACAATAGATGCGATTACCAACCTTCAC
CGAATCCTTCTACGGCGAAGAGATGTACATTCGTTTCCCGCTCGCGGCGA
CTTGGACAAGGTGTTGGATGCCATCATGGGCGAAGTGGAAATATTAACTG
GCGTTGTAAAGGAAATCGAATCATCTGATCCCTCGATAAAGCACGAGGAA
GCCAGAGATAAGTCGCTGTGCTAAAAGCTTTCTAGACCAT
BS31340.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:44:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17564-RB | 1008 | CG17564-PB | 1..1008 | 17..1024 | 5040 | 100 | Plus |
| CG10750-RB | 996 | CG10750-PB | 265..699 | 281..715 | 390 | 72.6 | Plus |
| CG10750-RA | 996 | CG10750-PA | 265..699 | 281..715 | 390 | 72.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:44:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17564-RB | 1305 | CG17564-RB | 207..1214 | 17..1024 | 5040 | 100 | Plus |
| CG10750-RB | 1175 | CG10750-RB | 383..817 | 281..715 | 390 | 72.6 | Plus |
| CG10750-RA | 1175 | CG10750-RA | 383..817 | 281..715 | 390 | 72.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:44:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19298988..19299442 | 584..130 | 2275 | 100 | Minus |
| 2L | 23513712 | 2L | 19298642..19298929 | 872..585 | 1440 | 100 | Minus |
| 2L | 23513712 | 2L | 19298436..19298589 | 1024..871 | 770 | 100 | Minus |
| 2L | 23513712 | 2L | 19299615..19299727 | 129..17 | 565 | 100 | Minus |
| 2L | 23513712 | 2L | 19300699..19300994 | 281..576 | 220 | 71.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:44:55 has no hits.
BS31340.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-13 13:56:32 Download gff for
BS31340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17564-RB | 125..1130 | 17..1022 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:24 Download gff for
BS31340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17564-RB | 207..1212 | 17..1022 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:31 Download gff for
BS31340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17564-RB | 207..1212 | 17..1022 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:31 Download gff for
BS31340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19298438..19298587 | 873..1022 | 100 | <- | Minus |
| 2L | 19298642..19298929 | 585..872 | 100 | <- | Minus |
| 2L | 19298988..19299442 | 130..584 | 100 | <- | Minus |
| 2L | 19299615..19299727 | 17..129 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:24 Download gff for
BS31340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19298438..19298587 | 873..1022 | 100 | <- | Minus |
| arm_2L | 19298642..19298929 | 585..872 | 100 | <- | Minus |
| arm_2L | 19298988..19299442 | 130..584 | 100 | <- | Minus |
| arm_2L | 19299615..19299727 | 17..129 | 100 | | Minus |
BS31340.pep Sequence
Translation from 16 to 1023
> BS31340.pep
MPRVKPTKKLDVLGNLDLRPEDAVGDYISSKQQNKFFVIPPNSDSAGDSI
ELIYVNNLREHEAMLKLQEEMLTSAKRQTKLNSARVRNMYKIQERLRRRF
IEVNSFIKDCADKKRVAEKTAQAETLNHKELGEGIESFKDSIGELKAFRE
ALKATVQEFQPYEKVLDEVVKVSDIFVSPKDCTDRCDALMLAQVEINKLE
HQKLQDIENMRQRMVQITNDAALTVLGLKNDLAKLERSYNESRVQCLRWE
KILAKTKDAINNNYMDKERTIDAITNLHRILLRRRDVHSFPARGDLDKVL
DAIMGEVEILTGVVKEIESSDPSIKHEEARDKSLC*
BS31340.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17564-PB | 335 | CG17564-PB | 1..335 | 1..335 | 1691 | 100 | Plus |
| CG10750-PA | 331 | CG10750-PA | 1..320 | 1..320 | 993 | 60.9 | Plus |
| CG10750-PB | 331 | CG10750-PB | 1..320 | 1..320 | 986 | 60.6 | Plus |
