Clone BS31351 Report

Search the DGRC for BS31351

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:313
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG33098-RB
Protein status:BS31351.pep: full length peptide match
Sequenced Size:725

Clone Sequence Records

BS31351.complete Sequence

725 bp assembled on 2012-07-13

GenBank Submission: KX801902

> BS31351.complete
GAAGTTATCAGTCGACATGTCGATGGATCCATCGGTTTCTCTAGAGGATC
TGGAGCGACGTCGTCGTCGCGCCAGTTCCGCCCGCAAGCAGTCACATACT
CCCCAGCCAGCATCTCACCTGGCGGATTCGGAGGCCATGGCCGTAATCAA
TGAGATATTTAATCCCACGCTGAAGCTGCCGGAGTCCAGTGGCCACTATA
CGCTGCCCGAGGAGATGAGGGCCGATGATAATGTGGCGCCCCATGAACTG
GACATTGCCAAGCTGGCGGAGCTGAAGGAAGTCTTCTCGCTCTTCGATAC
GGACTGCGATGGACTGATCTCGAAGGATGATCTACGGTTCACCTACACGG
CGCTGGGCAACGAACCGAACGAACAGCTACTGGAACAGATGATGCAGGAG
GCCAAGGAGCCGCTCGACTATGAAGCCTTCGTTCGGCTGATGAGTCGTCG
CACCCAGGAACTGGATCCCGAGGATGTTTTGTTGGAGGCCTGGAGCAAAT
GGGATGACCATGGCACGGGCAAGATCGACGAACGCAAAATCTATGAAGAG
CTGACCAACTATGGTGACAAAATGACCCTCAACGAGGCCAAGGAGGCTCT
TAGCCACGCCCCGATGGCCAAGCCCAAGTCCTTGGAGGAGCCGCCCATGA
TCGATTACCCGGCCTTCTGTCGCATGCTAAGTGGAATGCGGAAGCGGAAA
GGGGAATAAAAGCTTTCTAGACCAT

BS31351.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:45:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG33098-RF 693 CG33098-PF 1..693 17..709 3465 100 Plus
CG33098-RE 693 CG33098-PE 1..693 17..709 3465 100 Plus
CG33098-RB 693 CG33098-PB 1..693 17..709 3465 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:45:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG33098-RF 1182 CG33098-RF 165..857 17..709 3465 100 Plus
CG33098-RE 1169 CG33098-RE 152..844 17..709 3465 100 Plus
CG33098-RB 1049 CG33098-RB 32..724 17..709 3465 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:44:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12387979..12388235 281..537 1285 100 Plus
3R 32079331 3R 12387705..12387928 59..282 1120 100 Plus
3R 32079331 3R 12388298..12388469 538..709 860 100 Plus
3R 32079331 3R 12387596..12387637 17..58 210 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:45:00 has no hits.

BS31351.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-13 13:56:33 Download gff for BS31351.complete
Subject Subject Range Query Range Percent Splice Strand
CG33098-RB 32..722 17..707 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:26 Download gff for BS31351.complete
Subject Subject Range Query Range Percent Splice Strand
CG33098-RB 32..722 17..707 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:32 Download gff for BS31351.complete
Subject Subject Range Query Range Percent Splice Strand
CG33098-RB 32..722 17..707 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:32 Download gff for BS31351.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12388298..12388467 538..707 100   Plus
3R 12387596..12387637 17..58 100 -> Plus
3R 12387705..12387926 59..280 100 -> Plus
3R 12387979..12388235 281..537 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:26 Download gff for BS31351.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8213318..8213359 17..58 100 -> Plus
arm_3R 8213427..8213648 59..280 100 -> Plus
arm_3R 8213701..8213957 281..537 100 -> Plus
arm_3R 8214020..8214189 538..707 100   Plus

BS31351.pep Sequence

Translation from 16 to 708

> BS31351.pep
MSMDPSVSLEDLERRRRRASSARKQSHTPQPASHLADSEAMAVINEIFNP
TLKLPESSGHYTLPEEMRADDNVAPHELDIAKLAELKEVFSLFDTDCDGL
ISKDDLRFTYTALGNEPNEQLLEQMMQEAKEPLDYEAFVRLMSRRTQELD
PEDVLLEAWSKWDDHGTGKIDERKIYEELTNYGDKMTLNEAKEALSHAPM
AKPKSLEEPPMIDYPAFCRMLSGMRKRKGE*

BS31351.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG33098-PF 230 CG33098-PF 1..230 1..230 1196 100 Plus
CG33098-PE 230 CG33098-PE 1..230 1..230 1196 100 Plus
CG33098-PB 230 CG33098-PB 1..230 1..230 1196 100 Plus
CG33098-PC 199 CG33098-PC 1..174 1..174 900 100 Plus
CG33098-PD 164 CG33098-PD 1..164 67..230 862 100 Plus