BS31351.complete Sequence
725 bp assembled on 2012-07-13
GenBank Submission: KX801902
> BS31351.complete
GAAGTTATCAGTCGACATGTCGATGGATCCATCGGTTTCTCTAGAGGATC
TGGAGCGACGTCGTCGTCGCGCCAGTTCCGCCCGCAAGCAGTCACATACT
CCCCAGCCAGCATCTCACCTGGCGGATTCGGAGGCCATGGCCGTAATCAA
TGAGATATTTAATCCCACGCTGAAGCTGCCGGAGTCCAGTGGCCACTATA
CGCTGCCCGAGGAGATGAGGGCCGATGATAATGTGGCGCCCCATGAACTG
GACATTGCCAAGCTGGCGGAGCTGAAGGAAGTCTTCTCGCTCTTCGATAC
GGACTGCGATGGACTGATCTCGAAGGATGATCTACGGTTCACCTACACGG
CGCTGGGCAACGAACCGAACGAACAGCTACTGGAACAGATGATGCAGGAG
GCCAAGGAGCCGCTCGACTATGAAGCCTTCGTTCGGCTGATGAGTCGTCG
CACCCAGGAACTGGATCCCGAGGATGTTTTGTTGGAGGCCTGGAGCAAAT
GGGATGACCATGGCACGGGCAAGATCGACGAACGCAAAATCTATGAAGAG
CTGACCAACTATGGTGACAAAATGACCCTCAACGAGGCCAAGGAGGCTCT
TAGCCACGCCCCGATGGCCAAGCCCAAGTCCTTGGAGGAGCCGCCCATGA
TCGATTACCCGGCCTTCTGTCGCATGCTAAGTGGAATGCGGAAGCGGAAA
GGGGAATAAAAGCTTTCTAGACCAT
BS31351.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:45:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33098-RF | 693 | CG33098-PF | 1..693 | 17..709 | 3465 | 100 | Plus |
CG33098-RE | 693 | CG33098-PE | 1..693 | 17..709 | 3465 | 100 | Plus |
CG33098-RB | 693 | CG33098-PB | 1..693 | 17..709 | 3465 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:45:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33098-RF | 1182 | CG33098-RF | 165..857 | 17..709 | 3465 | 100 | Plus |
CG33098-RE | 1169 | CG33098-RE | 152..844 | 17..709 | 3465 | 100 | Plus |
CG33098-RB | 1049 | CG33098-RB | 32..724 | 17..709 | 3465 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:44:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12387979..12388235 | 281..537 | 1285 | 100 | Plus |
3R | 32079331 | 3R | 12387705..12387928 | 59..282 | 1120 | 100 | Plus |
3R | 32079331 | 3R | 12388298..12388469 | 538..709 | 860 | 100 | Plus |
3R | 32079331 | 3R | 12387596..12387637 | 17..58 | 210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:45:00 has no hits.
BS31351.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-13 13:56:33 Download gff for
BS31351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33098-RB | 32..722 | 17..707 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:26 Download gff for
BS31351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33098-RB | 32..722 | 17..707 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:32 Download gff for
BS31351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33098-RB | 32..722 | 17..707 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:32 Download gff for
BS31351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12388298..12388467 | 538..707 | 100 | | Plus |
3R | 12387596..12387637 | 17..58 | 100 | -> | Plus |
3R | 12387705..12387926 | 59..280 | 100 | -> | Plus |
3R | 12387979..12388235 | 281..537 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:26 Download gff for
BS31351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8213318..8213359 | 17..58 | 100 | -> | Plus |
arm_3R | 8213427..8213648 | 59..280 | 100 | -> | Plus |
arm_3R | 8213701..8213957 | 281..537 | 100 | -> | Plus |
arm_3R | 8214020..8214189 | 538..707 | 100 | | Plus |
BS31351.pep Sequence
Translation from 16 to 708
> BS31351.pep
MSMDPSVSLEDLERRRRRASSARKQSHTPQPASHLADSEAMAVINEIFNP
TLKLPESSGHYTLPEEMRADDNVAPHELDIAKLAELKEVFSLFDTDCDGL
ISKDDLRFTYTALGNEPNEQLLEQMMQEAKEPLDYEAFVRLMSRRTQELD
PEDVLLEAWSKWDDHGTGKIDERKIYEELTNYGDKMTLNEAKEALSHAPM
AKPKSLEEPPMIDYPAFCRMLSGMRKRKGE*
BS31351.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33098-PF | 230 | CG33098-PF | 1..230 | 1..230 | 1196 | 100 | Plus |
CG33098-PE | 230 | CG33098-PE | 1..230 | 1..230 | 1196 | 100 | Plus |
CG33098-PB | 230 | CG33098-PB | 1..230 | 1..230 | 1196 | 100 | Plus |
CG33098-PC | 199 | CG33098-PC | 1..174 | 1..174 | 900 | 100 | Plus |
CG33098-PD | 164 | CG33098-PD | 1..164 | 67..230 | 862 | 100 | Plus |