BS31391.complete Sequence
2516 bp assembled on 2012-07-31
GenBank Submission: KX806343
> BS31391.complete
GAAGTTATCAGTCGACATGTCTGAAGCGGAGCTGGAACAGACACCCAGCG
CGGGCCACGTGCAGGAGCAGCCGATTGAGGAGGAGCATGAGCCGGAACAG
GAGCCAACCGATGCGTACACAATTGGCGGTCCGCCGAGGACGCCGGTTGA
AGATGCGGCGGCCGAATTGAGCGCCAGTCTAGACGTCAGCGGCTCGGATC
AGTCGGCGGAGCAGTCGCTCGACCTCAGCGGTGTCCAAGCGGAGGCCGCG
GCGGAGTCAGAGCCACCGGCGAAGCGCCAGCATCGCGACATCAGTCCCAT
TTCGGAGGACAGCACGCCGGCGAGCAGCACATCGACTAGTTCCACCAGGT
CGTCCAGCTCCTCCCGCTACGACGATGTTAGCGAGGCGGAGGAGGCACCA
CCGGAGCCCGAGCCGGAGCAACCACAGCAGCAGCAGCAGGAGGAAAAGAA
GGAGGACGGTCAGGATCAGGTGAAGTCACCAGGTCCAGTTGAATTGGAGG
CACAGGAGCCCGCGCAGCCGCAGAAGCAGAAAGAGGTGGTGGACCAGGAA
ATTGAAACCGAGGATGAGCCCTCCTCCGATACGGTAATCTGCGTGGCCGA
CATCAACCCCTACGGCAGTGGTTCCAACATTGACGACTTCGTTATGGATC
CCGATGCTCCTCCCAATGCAATAATCACCGAGGTGGTTACCATTCCAGCT
CCTCTTCATCTCAAAGGGACACAACAACTGGGGCTGCCATTGGCTGCCCC
ACCGCCACCACCACCTCCTCCAGCAGCGGAACAAGTCCCCGAGACTCCCG
CCTCGCCCACAGATGACGGCGAGGAACCACCAGCAGTATATTTATCCCCC
TACATACGCTCTCGCTACATGCAGGAATCGACACCTGGCCTGCCCACCCG
CCTGGCGCCGCGTGATCCTCGCCAGCGCAACATGCCGCCGCCAGCCGTAG
TTCTGCCCATTCAAACCGTACTTAGCGCCAACGTTGAGGCCATTTCTGAC
GACAGCAGCGAAACTAGCAGCAGCGATGACGATGAAGAGGAAGAGGAGGA
CGAAGATGATGCCTTGACCATGGAGCACGACAACACTTCCAGGGAGACGG
TCATCACAACAGGTGACCCTCTGATGCAAAAGATCGATATAAGCGAAAAT
CCCGACAAGATCTATTTTATTCGGCGCGAGGATGGCACCGTGCACCGTGG
CCAGGTGCTTCAGTCTCGCACCACTGAGAATGCGGCCGCTCCCGATGAGT
ACTACGTCCACTATGTTGGTCTCAATCGCCGCCTGGACGGATGGGTGGGC
AGGCATAGGATCTCGGACAATGCGGATGACTTGGGCGGTATTACCGTGCT
GCCAGCGCCACCATTAGCCCCCGATCAGCCAAGTACTAGCAGGGAAATGC
TCGCCCAACAGGCCGCCGCGGCGGCAGCTGCCTCATCCGAACGGCAGAAG
CGTGCGGCCAACAAGGATTACTATCTGTCCTATTGCGAGAACAGTCGCTA
TGACTACAGCGACCGCAAGATGACACGCTACCAGAAGCGGCGCTACGATG
AGATCAACCACGTGCAGAAGAGCCACGCTGAGCTGACCGCCACGCAGGCG
GCGCTGGAGAAGGAGCACGAGTCCATTACGAAGATCAAGTACATTGATAA
GCTGCAGTTTGGCAACTACGAGATCGACACCTGGTACTTTAGTCCCTTCC
CCGAAGAATATGGCAAGGCACGTACGTTATATGTTTGCGAGTACTGCCTA
AAGTACATGCGCTTCAGGTCGAGCTATGCCTATCATCTGCACGAATGCGA
CCGCAGGCGTCCGCCCGGAAGAGAGATCTACCGCAAGGGCAATATATCCA
TTTACGAGGTGAACGGCAAGGAGGAGTCACTATACTGCCAACTTTTGTGT
CTGATGGCCAAGCTCTTTTTGGACCACAAGGTTCTATACTTCGACATGGA
CCCGTTTCTCTTTTACATCCTTTGCGAGACGGACAAGGAGGGCAGTCACA
TTGTGGGCTATTTCTCCAAGGAAAAGAAGTCGCTGGAAAACTACAACGTG
GCCTGCATTCTGGTATTGCCGCCGCATCAGCGTAAGGGATTTGGAAAGCT
ACTAATAGCCTTTAGCTATGAGCTGTCGCGCAAGGAGGGCGTAATCGGTA
GTCCGGAGAAACCGCTCTCGGATCTGGGTAGGCTGAGCTATCGCAGCTAT
TGGGCATACACGCTGCTGGAGCTGATGAAAACCCGCTGCGCTCCAGAGCA
GATCACAATCAAGGAGCTGAGCGAAATGAGTGGCATCACCCACGACGACA
TTATCTACACGCTGCAGTCCATGAAGATGATCAAGTATTGGAAGGGCCAG
AATGTCATTTGCGTTACGTCCAAGACCATTCAAGACCACCTCCAGCTGCC
GCAGTTCAAGCAGCCCAAGCTGACCATCGACACCGATTACCTCGTCTGGA
GTCCGCAAACTGCAGCGGCAGTGGTCAGAGCTCCGGGAAATTCCGGCTAG
AAGCTTTCTAGACCAT
BS31391.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:13:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mof-RA | 2484 | CG3025-PA | 1..2484 | 17..2500 | 12420 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:13:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mof-RA | 3014 | CG3025-RA | 102..2585 | 17..2500 | 12420 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:13:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5874269..5876752 | 2500..17 | 12420 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 12:13:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6861 | 390..534 | 170 | 60.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1049..1144 | 390..488 | 163 | 65.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6859 | 411..550 | 159 | 58.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6789..6918 | 405..534 | 154 | 59.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2304..2390 | 384..469 | 144 | 64.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6810..6889 | 390..469 | 139 | 63.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6756..6903 | 405..552 | 136 | 56.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6901 | 405..532 | 128 | 57.8 | Plus |
BS31391.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-31 08:44:09 Download gff for
BS31391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mof-RA | 100..2583 | 17..2500 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:01 Download gff for
BS31391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mof-RA | 102..2585 | 17..2500 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:59:47 Download gff for
BS31391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mof-RA | 102..2585 | 17..2500 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:59:47 Download gff for
BS31391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5874269..5876752 | 17..2500 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:01 Download gff for
BS31391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5768302..5770785 | 17..2500 | 100 | | Minus |
BS31391.pep Sequence
Translation from 16 to 2499
> BS31391.pep
MSEAELEQTPSAGHVQEQPIEEEHEPEQEPTDAYTIGGPPRTPVEDAAAE
LSASLDVSGSDQSAEQSLDLSGVQAEAAAESEPPAKRQHRDISPISEDST
PASSTSTSSTRSSSSSRYDDVSEAEEAPPEPEPEQPQQQQQEEKKEDGQD
QVKSPGPVELEAQEPAQPQKQKEVVDQEIETEDEPSSDTVICVADINPYG
SGSNIDDFVMDPDAPPNAIITEVVTIPAPLHLKGTQQLGLPLAAPPPPPP
PPAAEQVPETPASPTDDGEEPPAVYLSPYIRSRYMQESTPGLPTRLAPRD
PRQRNMPPPAVVLPIQTVLSANVEAISDDSSETSSSDDDEEEEEDEDDAL
TMEHDNTSRETVITTGDPLMQKIDISENPDKIYFIRREDGTVHRGQVLQS
RTTENAAAPDEYYVHYVGLNRRLDGWVGRHRISDNADDLGGITVLPAPPL
APDQPSTSREMLAQQAAAAAAASSERQKRAANKDYYLSYCENSRYDYSDR
KMTRYQKRRYDEINHVQKSHAELTATQAALEKEHESITKIKYIDKLQFGN
YEIDTWYFSPFPEEYGKARTLYVCEYCLKYMRFRSSYAYHLHECDRRRPP
GREIYRKGNISIYEVNGKEESLYCQLLCLMAKLFLDHKVLYFDMDPFLFY
ILCETDKEGSHIVGYFSKEKKSLENYNVACILVLPPHQRKGFGKLLIAFS
YELSRKEGVIGSPEKPLSDLGRLSYRSYWAYTLLELMKTRCAPEQITIKE
LSEMSGITHDDIIYTLQSMKMIKYWKGQNVICVTSKTIQDHLQLPQFKQP
KLTIDTDYLVWSPQTAAAVVRAPGNSG*
BS31391.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:22:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mof-PA | 827 | CG3025-PA | 1..827 | 1..827 | 4337 | 100 | Plus |
| Tip60-PC | 541 | CG6121-PC | 250..534 | 533..814 | 802 | 50.5 | Plus |
| Tip60-PA | 541 | CG6121-PA | 250..534 | 533..814 | 802 | 50.5 | Plus |
| CG1894-PA | 421 | CG1894-PA | 134..418 | 531..815 | 790 | 52.8 | Plus |
| Tip60-PB | 473 | CG6121-PB | 250..453 | 533..736 | 694 | 58.8 | Plus |
