BS31401.complete Sequence
4118 bp assembled on 2012-09-07
GenBank Submission: KX803479
> BS31401.complete
GAAGTTATCAGTCGACATGGGCAACGTGTGCAGTTCCGGCCAGAAGAAAA
AGAAGGACAAGGACAGTGCCTCCGAAAAGTCAGACGACTCGCCTCCCTAC
CAGGAGGCGGATCAGAAGGACACCCTGATCTCCGCCGACTCGAGTGCTGG
TGATGGAAAGCGGGCACCTTTGGCCGCCGTGGAGGCACTTCCGGAGGTGA
CACCGCTGCCGGAGTCCAATGGCAACCAGGCGCAGGTCCAGAAGCAGCTG
TCAACGGGACCGGGGAGCAAGCCAGGTGGAGCAGAGAAGGATTCAAACAG
CACCACTCCGCAGGGGGCGCAGGCGCCCAGTGATGTGGCCAATGCCAATC
CCGGTGCCGGAAACCTGAGCGTGCTGCAGGGCAAGCCGCCGCCCGGCCGC
AAGATTGAGCGGGACAAGAAGATCGTGGTCTACATTCTGGCGGACAACAG
CACCGAGTACAAGAAGCACAAGCGGGTCGTGCACAGCCTGTACAAGCATT
TCAAGAGCAAGTGCCAAAGCCGCGGCTTTGACTTCATCATCGCCGATGTG
CACGACAGCGAGCCGGAGACGGAACCGGGCAATGGCAATGCCCGGAAGGA
TTTCTCCCGCCTGCAGGAGGCGAAGCGCTGGACCCAAACGCCTCTGGAGG
CGCAGGGTGGTCACGAGGAAGCGGCCAACTGCCTGTGCGAGATCACGCGC
CACTCGGCCGGAGCGTACATGATCCCCGTTCTGTTCTTGGGCGCCACCCT
GGGCACTCCGATGCTCCCGCTGACCATCGAGAGCCAGGACTTCACCTCGG
TGCTGGGCACCGCTAGCGAGGAAGAGCGTTTGCTCCTGGAGAAATGGTAC
ACCATTGACAACTCGTACCAGCCGATGTGCCACCGTCTGCATGCCCAACA
GGTGGATCCCTACTCCAGTCAGGTGAACGGAGAGCTCAACGAGCTGCTGG
CCGTCCTTTTGCGTCTCTTCTCCGACGACGTCAAGGACTCGTATCTGACC
ACCGTGGTGGAGCAGGAGATCAATAACACGGTGCTGATGAGCCAGGAGCT
GGCCAAGCGATGTATCTGGATCCAGACGGGCAGCCAGGTGGCCCGGCCAT
CGGAGAATGCTAGCCCCTTGGAGCTGGAGGTGCAGCGGAGGCTCAGTCAT
GTGTACTCCGGTCTCAAGAGCCAGTTGAGCGAGAAAAACCTCATCCGTCT
GCTGCCCACGATGAGCATCCTGGACGAGGAGTTGTCGGCGGTGATCGAGA
GTCTGCTGGACAAGACGCTGGCCGGCATCTTCGAGGAGCACCAGCAGAAG
AACAGCATCCCCTACAATACGCTGGGCGTGGACCGGGTGCTGCTCGAGGA
GCTTCGCCTGGTGGGCCACTACTCCAAGCTCCTGGCACAGAACTCGGCCA
ACTTCGACATCATGAACGACGTGAAGCGCTACATTCGCGACAGCACCGCC
CAACCGCTAGTCGTGTCCGGGGCACGGGGAAGTGGCAAGAGTGTCCTGGT
CTCCAAGATCATGGAGAATGTCCACCGCTGGAAGCCGGAGGCACAGCTCA
TACTGAGATACGCCAATCTCAGTGCCCGCTCATCGGATCTCACCTCATTG
CTAGGCTCAATGGCCAACCAGATGTCGGTCCTGGAGACGGGACATCAGTG
CCAAGTGCCACACACACTAGAGGGTTATTCTCGAGTGATTCGAGAGATCC
TTGACCGGCAGCAGCGCTTCTTCGTGCTGATCATCGACGGTGTGGACGAA
CTGCAGCGGGATGAGCTGCTCGACTGGCTCCCCCAGCAGTTGGGCAGCGC
CAAAATGATCCTCACCGTCAGCGAGCTGGCGGATGAGGGGGAGGACGTGG
ACGGGACGGAGGCTGGGGACTCCTTTGATATGCTAGCCGCGCTGGCGCAG
TTGGGCATACCACAGCGGTGCTTCCTACGACTGCGACAATTCACGGAACG
CCAGTGGCACGACATCCTCAGCTCGGGCGGCGGTGACTTCTACGCGGCCA
ATGGGGCGTTGAAGTTGCCCGACGACTGGAAGACACTGCACGGGAAGACG
CCCTACCACGCCAAGTCCTTGTGGTGGCTGGCCTGGCTGGGGCATGTGGC
TCAGCCGATCAGCGAGATCGGCGACATCTCCAGCCGGATACTTCAGGTCC
TGGAATCCAAGTTCGCCACCGATCAGGTGGAACTGCTGCTGCTGATCGTC
CGCCTCTCGCCGTGGGGCATCCGGGAGAGCGACTGCCTGGGCGTGTTCCA
GAAGATGACCCAGCTGGAGGCGCAGGTCGCCTTCAAGGTCTGGTCCAAGT
TCTGCTGGCTGATGGGACCAATGCTATTAGGTCTTAAGAATATTAGGATA
GCGGACAAGAGCTTTGGACGAGCGGTCCTGGCGAGGTACGCGCAGAAGCA
GTGGCTGGTACATGAAGCGCTGCGGGACTACTTCGACCGGCAGGACAGCG
AGTTCAAGGGTAGCCAGGGTGCCAACACCTACAATTACCAAAAGTACTTA
AAACTGCCTTATCATCATTTCTGTGCCGTGATCGAGGACAATCCGGCGCC
TCACAAGATCGACATACTCTTCAACTGCTTTTACTTTACGGACCTCCAGT
GGATCGCCAATAAGGTGCACGCCACGGGACCGGAGCACCTGCTGAACGAC
ATCCTGCAGGCGGAGTGGCTGGCCAAGTCCGGCGGCGAGAACTGCCCCAC
CGCTTACGTGCACATCTGTTTCCTGAAGCAATTCCTCGAGCAGTATCTCC
ACGAGCTGAGCTACGATGGTCAGCAGTTCTACACGCTGATGAAGTACTAT
CTCAAGACGCGCTTCAGGGAGGCACCCGAGCTCAAGGACGACGAGAAGAT
ACGCTCGTGGTGGGAGTACACCAATGAGCTCGAGTTTGCCTTCCTCGAGA
TTCTAAACGCGGACTTGGACGCGGAGAACGGCAATCAGGCGGAGCAGGAG
AAGCCGTCGGATGACGCAGTCCCATCCTCGGTTCCCGTTAAGGGCTACGA
TGTCCTGATGAACCTGCCCCAGCCCGGATGCTATGTGGCTTCGATGTGCA
CGGACCGATCTGAGATCTGCATATGGGACGTGAAGAATTGCTGTCGAATC
CGGGAGCTACAGGGCATCCAGCAGCCTACGGCGATGTGTCCCGTGGGTAA
CTATGAGGCAGCAGTCCTTTGTCGCCGCGAGATCCGCGTCATCAATCTGG
ACGAGGGAAAGTTTAAGGTCACTCTCAAAGGCGTAATGAACCAGAAAATG
CCGTATTTCGGTCTGCACGATCAGAATCACTTGGTTTGTCTCTCGCGCAA
CCGGATGTATGTGAATCTGATGAATCTGGAGTCGGGCGATTGTGTGACCA
CCTTCAAGGCGGGTGAAGATCGTTTCCTCAATTCCCTGTTGGTCTCTGGA
GATGGAAGAATCTTGGTGTGCGGTGATGAGACCCAGAAGCCTTTCCCACT
GCTAGTTTGGCACCTTTCGCAGCGAAAGCTGCTCTATGACCTCCGAATTC
CGCACCACGACTTCATCACCTCCCTCTCCGCGATCACCCACGAGGGTTCC
TACGTTTGCGTGGTGGCCAAAGAGCTGAACGAGCCGACGACGCCCAACTT
CATTGTGGTATACGACTTACAGAGCGGCACTCTGTTTAAGAAATGGAAGC
CCGCCTGCAACACAGTTTCCCTGGCCATCTCCCAGGTGAACGCTTGCGTC
ATCGCCGGCCTAGAAGATGCCAAAATCCTAATCTGGGACCTGGTCACGGG
CAACTGCAAGAGCACCTTGATCGGCCACAATGCACCGGTAACGTTCTTGA
AGCTGGATCCATTGGGAAAGGTGCTGCTCTCCTACGACAAGGAGGGACGT
GATTCGGCCGTCCGTATGTGGGAGTTGAATTCGGCCAAATCCCTGGCCGT
GTTTAAGCCACCGGCGCAAGTGAGCACTTGTGAGATTCTGCCGAACGGAG
CCTTCGTGGTGCTGGCTCTCAAGGATCGCAACTCCTTGCTGACCCTGGCT
TTGAAGAACTACGGCGGAGGATCGGGCGCCCTCGACGATGACTGTGGCAC
TCTTTACGGCAATCCAGACAACCAGCACAAAGTTTTCGACTTGAGTAATT
AAAAGCTTTCTAGACCAT
BS31401.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:59:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10132-RB | 4086 | CG10132-PB | 1..4086 | 17..4102 | 20430 | 100 | Plus |
| CG10132-RA | 4086 | CG10132-PA | 1..4086 | 17..4102 | 20430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:59:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10132-RB | 4570 | CG10132-RB | 272..4359 | 16..4103 | 20440 | 100 | Plus |
| CG10132-RA | 4685 | CG10132-RA | 387..4474 | 16..4103 | 20440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:59:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19521066..19522333 | 290..1557 | 6340 | 100 | Plus |
| 2L | 23513712 | 2L | 19522562..19523376 | 1664..2478 | 4075 | 100 | Plus |
| 2L | 23513712 | 2L | 19523433..19524177 | 2475..3219 | 3710 | 99.9 | Plus |
| 2L | 23513712 | 2L | 19524489..19524966 | 3407..3884 | 2390 | 100 | Plus |
| 2L | 23513712 | 2L | 19525023..19525242 | 3884..4103 | 1100 | 100 | Plus |
| 2L | 23513712 | 2L | 19520713..19520915 | 88..290 | 1015 | 100 | Plus |
| 2L | 23513712 | 2L | 19524238..19524430 | 3216..3408 | 965 | 100 | Plus |
| 2L | 23513712 | 2L | 19522397..19522504 | 1556..1663 | 540 | 100 | Plus |
| 2L | 23513712 | 2L | 19520584..19520655 | 16..87 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:59:26 has no hits.
BS31401.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-07 14:48:06 Download gff for
BS31401.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10132-RA | 425..4508 | 17..4100 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:44 Download gff for
BS31401.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10132-RA | 425..4508 | 17..4100 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:18:45 Download gff for
BS31401.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10132-RA | 388..4471 | 17..4100 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:18:45 Download gff for
BS31401.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19525024..19525239 | 3885..4100 | 100 | | Plus |
| 2L | 19520585..19520655 | 17..87 | 100 | -> | Plus |
| 2L | 19520713..19520915 | 88..290 | 100 | -> | Plus |
| 2L | 19521067..19522333 | 291..1557 | 100 | -> | Plus |
| 2L | 19522399..19522504 | 1558..1663 | 100 | -> | Plus |
| 2L | 19522562..19523376 | 1664..2478 | 100 | -> | Plus |
| 2L | 19523437..19524175 | 2479..3217 | 100 | -> | Plus |
| 2L | 19524240..19524430 | 3218..3408 | 100 | -> | Plus |
| 2L | 19524491..19524966 | 3409..3884 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:44 Download gff for
BS31401.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19520585..19520655 | 17..87 | 100 | -> | Plus |
| arm_2L | 19520713..19520915 | 88..290 | 100 | -> | Plus |
| arm_2L | 19521067..19522333 | 291..1557 | 100 | -> | Plus |
| arm_2L | 19522399..19522504 | 1558..1663 | 100 | -> | Plus |
| arm_2L | 19522562..19523376 | 1664..2478 | 100 | -> | Plus |
| arm_2L | 19523437..19524175 | 2479..3217 | 100 | -> | Plus |
| arm_2L | 19524240..19524430 | 3218..3408 | 100 | -> | Plus |
| arm_2L | 19524491..19524966 | 3409..3884 | 100 | -> | Plus |
| arm_2L | 19525024..19525239 | 3885..4100 | 100 | | Plus |
BS31401.pep Sequence
Translation from 16 to 4101
> BS31401.pep
MGNVCSSGQKKKKDKDSASEKSDDSPPYQEADQKDTLISADSSAGDGKRA
PLAAVEALPEVTPLPESNGNQAQVQKQLSTGPGSKPGGAEKDSNSTTPQG
AQAPSDVANANPGAGNLSVLQGKPPPGRKIERDKKIVVYILADNSTEYKK
HKRVVHSLYKHFKSKCQSRGFDFIIADVHDSEPETEPGNGNARKDFSRLQ
EAKRWTQTPLEAQGGHEEAANCLCEITRHSAGAYMIPVLFLGATLGTPML
PLTIESQDFTSVLGTASEEERLLLEKWYTIDNSYQPMCHRLHAQQVDPYS
SQVNGELNELLAVLLRLFSDDVKDSYLTTVVEQEINNTVLMSQELAKRCI
WIQTGSQVARPSENASPLELEVQRRLSHVYSGLKSQLSEKNLIRLLPTMS
ILDEELSAVIESLLDKTLAGIFEEHQQKNSIPYNTLGVDRVLLEELRLVG
HYSKLLAQNSANFDIMNDVKRYIRDSTAQPLVVSGARGSGKSVLVSKIME
NVHRWKPEAQLILRYANLSARSSDLTSLLGSMANQMSVLETGHQCQVPHT
LEGYSRVIREILDRQQRFFVLIIDGVDELQRDELLDWLPQQLGSAKMILT
VSELADEGEDVDGTEAGDSFDMLAALAQLGIPQRCFLRLRQFTERQWHDI
LSSGGGDFYAANGALKLPDDWKTLHGKTPYHAKSLWWLAWLGHVAQPISE
IGDISSRILQVLESKFATDQVELLLLIVRLSPWGIRESDCLGVFQKMTQL
EAQVAFKVWSKFCWLMGPMLLGLKNIRIADKSFGRAVLARYAQKQWLVHE
ALRDYFDRQDSEFKGSQGANTYNYQKYLKLPYHHFCAVIEDNPAPHKIDI
LFNCFYFTDLQWIANKVHATGPEHLLNDILQAEWLAKSGGENCPTAYVHI
CFLKQFLEQYLHELSYDGQQFYTLMKYYLKTRFREAPELKDDEKIRSWWE
YTNELEFAFLEILNADLDAENGNQAEQEKPSDDAVPSSVPVKGYDVLMNL
PQPGCYVASMCTDRSEICIWDVKNCCRIRELQGIQQPTAMCPVGNYEAAV
LCRREIRVINLDEGKFKVTLKGVMNQKMPYFGLHDQNHLVCLSRNRMYVN
LMNLESGDCVTTFKAGEDRFLNSLLVSGDGRILVCGDETQKPFPLLVWHL
SQRKLLYDLRIPHHDFITSLSAITHEGSYVCVVAKELNEPTTPNFIVVYD
LQSGTLFKKWKPACNTVSLAISQVNACVIAGLEDAKILIWDLVTGNCKST
LIGHNAPVTFLKLDPLGKVLLSYDKEGRDSAVRMWELNSAKSLAVFKPPA
QVSTCEILPNGAFVVLALKDRNSLLTLALKNYGGGSGALDDDCGTLYGNP
DNQHKVFDLSN*
BS31401.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:28:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10132-PB | 1361 | CG10132-PB | 1..1361 | 1..1361 | 7140 | 100 | Plus |
| CG10132-PA | 1361 | CG10132-PA | 1..1361 | 1..1361 | 7140 | 100 | Plus |
