Clone BS31404 Report

Search the DGRC for BS31404

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:314
Well:4
Vector:pDNR-Dual
Associated Gene/TranscriptCG13026-RB
Protein status:BS31404.pep: gold
Sequenced Size:389

Clone Sequence Records

BS31404.complete Sequence

389 bp assembled on 2012-07-13

GenBank Submission: KX806282

> BS31404.complete
GAAGTTATCAGTCGACATGAAGAGCCTTTTTGCTACCATGTTGGGCTACT
TGCTCCTTGGGTTGGTGCTGTCTCATGCCAGCTTTGCAACTGCCACAAAT
GGAGTTATTCCAGCAGTGATTCCGGCAGTGCCCGCTACTGTTCCTCGCCT
GGTTCCCGTGGCCACCAGCCATCAGTTTGTCACTCGAAACTGGAATCGAG
TTTTCGTGCCCCCCGCCACGGTGGCCACTTATCCCAACACCTATGTTAAG
TACAGCGGTGGCTATCCGGCGTATCCCGCCTACAATTACCCATACGCCAC
CACCTATCCGTACACCTATCCCTACTACTATCCCACTTATAACGTTGGAT
ATGGTTACAAGGGTGTCTGGTGAAAGCTTTCTAGACCAT

BS31404.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG13026-RC 357 CG13026-PC 1..357 17..373 1785 100 Plus
CG13026-RB 357 CG13026-PB 1..357 17..373 1785 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:45:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG13026-RC 1431 CG13026-RC 45..402 16..373 1790 100 Plus
CG13026-RB 599 CG13026-RB 45..402 16..373 1790 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:45:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16725707..16726054 373..26 1740 100 Minus
Blast to na_te.dros performed on 2014-11-28 11:45:30 has no hits.

BS31404.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-13 14:20:39 Download gff for BS31404.complete
Subject Subject Range Query Range Percent Splice Strand
CG13026-RB 46..401 17..372 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:41 Download gff for BS31404.complete
Subject Subject Range Query Range Percent Splice Strand
CG13026-RB 46..401 17..372 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:41 Download gff for BS31404.complete
Subject Subject Range Query Range Percent Splice Strand
CG13026-RB 46..401 17..372 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:41 Download gff for BS31404.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16725708..16726056 23..372 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:41 Download gff for BS31404.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16718808..16719156 23..372 99   Minus

BS31404.pep Sequence

Translation from 16 to 372

> BS31404.pep
MKSLFATMLGYLLLGLVLSHASFATATNGVIPAVIPAVPATVPRLVPVAT
SHQFVTRNWNRVFVPPATVATYPNTYVKYSGGYPAYPAYNYPYATTYPYT
YPYYYPTYNVGYGYKGVW*

BS31404.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG13026-PC 118 CG13026-PC 1..118 1..118 648 100 Plus
CG13026-PB 118 CG13026-PB 1..118 1..118 648 100 Plus