Clone BS31447 Report

Search the DGRC for BS31447

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:314
Well:47
Vector:pDNR-Dual
Associated Gene/TranscriptCG14926-RA
Protein status:BS31447.pep: gold
Sequenced Size:557

Clone Sequence Records

BS31447.complete Sequence

557 bp assembled on 2012-07-13

GenBank Submission: KX800723

> BS31447.complete
GAAGTTATCAGTCGACATGGAAAACGGTCCGGAATTCAATTGGGAGTACA
GCCATGGTGGTCAGGGAAATCCCAACTACTCACAGATGGGAAGGGGTAGT
ACTCCTCCTGGAGGCGGTGGTCGTCAGTGGCTGCACTCAAGTCAAGCGAA
CACCCAAAACTATTTGCATGGATCCAGTGGAATGGGATCGCACCAGAATA
ACGCATCTCCAGGTGATCCATTCGCCTCCTACAACCAAAATATGATGAAC
ATGTACACGAATTTTAAGCCCAGTTACGGTCATTCTCAAGTTGGCCCGGC
TTCGGTACAGGGCATGGGCTCAGAGCCTGGTCTTGAAATGGGTAACAGAA
TGGGCCATTCCATGCCCGAGTCTATGGGATTCGATGGAGGCATGGGTTCC
GGCATGGGCATGAGCAATGGCCTTGGCGCTGGAATGCGAGTTGGTTCCAT
GCGTGGTGGTCAAAGGTTAGCTGGAGGCTACTCTTCGAATGGTCTCAATG
ATCCGAACCCTTCGCAATCCCACCGTGGTAGTTGGTTCTAGAAGCTTTCT
AGACCAT

BS31447.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:45:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG14926-RC 525 CG14926-PC 1..525 17..541 2625 100 Plus
CG14926-RB 525 CG14926-PB 1..525 17..541 2625 100 Plus
CG14926-RA 525 CG14926-PA 1..525 17..541 2625 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:45:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14926-RC 738 CG14926-RC 71..598 17..544 2640 100 Plus
CG14926-RB 853 CG14926-RB 151..678 17..544 2640 100 Plus
CG14926-RA 763 CG14926-RA 96..623 17..544 2640 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:45:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11342837..11343048 294..83 1060 100 Minus
2L 23513712 2L 11342581..11342780 493..294 1000 100 Minus
2L 23513712 2L 11343100..11343168 85..17 345 100 Minus
2L 23513712 2L 11342476..11342529 544..491 270 100 Minus
Blast to na_te.dros performed on 2014-11-28 11:45:25 has no hits.

BS31447.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-13 13:56:36 Download gff for BS31447.complete
Subject Subject Range Query Range Percent Splice Strand
CG14926-RA 96..620 17..541 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:39 Download gff for BS31447.complete
Subject Subject Range Query Range Percent Splice Strand
CG14926-RA 96..620 17..541 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:50:40 Download gff for BS31447.complete
Subject Subject Range Query Range Percent Splice Strand
CG14926-RA 96..620 17..541 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:50:40 Download gff for BS31447.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11342479..11342528 492..541 100 <- Minus
2L 11342583..11342779 295..491 100 <- Minus
2L 11342837..11343045 86..294 100 <- Minus
2L 11343100..11343168 17..85 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:39 Download gff for BS31447.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11342479..11342528 492..541 100 <- Minus
arm_2L 11342583..11342779 295..491 100 <- Minus
arm_2L 11342837..11343045 86..294 100 <- Minus
arm_2L 11343100..11343168 17..85 100   Minus

BS31447.pep Sequence

Translation from 16 to 540

> BS31447.pep
MENGPEFNWEYSHGGQGNPNYSQMGRGSTPPGGGGRQWLHSSQANTQNYL
HGSSGMGSHQNNASPGDPFASYNQNMMNMYTNFKPSYGHSQVGPASVQGM
GSEPGLEMGNRMGHSMPESMGFDGGMGSGMGMSNGLGAGMRVGSMRGGQR
LAGGYSSNGLNDPNPSQSHRGSWF*

BS31447.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG14926-PC 174 CG14926-PC 1..174 1..174 970 100 Plus
CG14926-PB 174 CG14926-PB 1..174 1..174 970 100 Plus
CG14926-PA 174 CG14926-PA 1..174 1..174 970 100 Plus