BS31466.complete Sequence
5843 bp assembled on 2012-07-27
GenBank Submission: KX801363
> BS31466.complete
GAAGTTATCAGTCGACATGGCCTCCCAACATTCCAGTTGGCGTTTTGGCA
AGCGGAGCAAATTACAATTACGCATCAAAGTTTCGCAGGATCCGGAGGAC
TTCTACCGCCTGGATCCACAGCGATCGGCCGCCGAAAATGCATTCGAAAT
ATACTCGATGCTCTGTTTGGAAGAGACGCGGGACACGAAGCGCCTGTTTC
TGCTCAACGCGCTGGCCTCGCTCTGTTTGGGGGCCCGAAAGGGCTCCCAC
CACAGCAATATACGCTTCACCACCGAGGAGCTGCTCTACTGCCTTAGTGC
CTCACTGGTGCACACCTTCACCCAAGTGCGAGCGGCGGCACTGCGAACGA
TCCGGTATGCCATTAGCACGCCCAATGACATCAAGACGTTCAATGCACTG
CAGCTGCAGCACCTGCTCTGCCGCTCCATCGATCTAATGCTGAAGAACGA
CGACGAGCGCGTCCAGGCACTGAAGCTGGTCCGCAAGATGCTGGCCATCG
CGCCGGAGGACATCAGTCCGGCGGTGGTGCGCTGCCTGGTCTCGCTGGCG
GATAGCGGCATCGAGGAGAACGACAATCTGTTGCGTGCCTGCCTGGCCAC
CCTGGCAGAGTTCGCTGTGCTCAATCCGGCGCTGCTGATCGTCTGCGGCG
GCGTCACCTCCATAACCCGCAATGTGCTAGAGTGCCACAATCCCCGCATC
GCTGAGAGCCTGTGCGGCGTGCTTCTGTACCTGCTCGAGTGGCCGCAAAC
GAGGAACATCTGCGGTGTGCGGCTGGACTGCCTGGCAGCTCCTTATTGCG
ATTTCACCTACCGGCAGAGTATCGTCGATAAGAACAAGGATGCGCGCGAA
CTTCGCTACACCAGCTGTCGGCTGGCACTGCTGTCTGTGCTGCGCAGCTG
GACGGGCACCCTCGAATTCTGTGATCCTAGCAAACCCTCAGGCCTGAAAG
CAATAGTCGACGCTCTGTATTTGAACCAGATCGAAGTCAGAAAAGCAATA
TTGGATTTGCTGTACGAGCTGCTCACGCTGCCGCAGCCAACATGGACGGA
TGACTATGCGGTGGCGTTGCAGGCTGTGGATCCGTCGGACTTCCAGGACA
CGTGGCTGCTGAGCAATGGCTTCGTGTCCGCCGAAGGGCGCTCCATTTTG
CCAACGCTGGCGGCGCGTGCACCGAGCGTAGTGGAGCAGCACCTGGCGCT
GATGCTGTACTGTTTCCTCGAGACTGGACTGCTCAATGCGCTCGTCGAGG
TTGTGGTGAGCAGCGATCAGTTCGTCTCGGTACAGGCTACGGTGCTGATT
GGCAAGATCCTGCAGCTAATGCACACCCACCTGCCCCCGGATATTTGCTG
TACGAGTCCGGCACTGCCCACGCTGGTGAGTCATGCCACATTGGGGAACC
AGCAGGCCAATGCAGCGGTGGCCGCTCTGCAAAACTACCAGAAGTTGCTG
CGCCAGCGGCCGGCGTCGCGCAGCTTATTCCTAGACAGCATTATCCAGGG
CGGTGCTCTCATCCAGACGCGACTGTTTCGTCGGCACCTCAACGTGCAGG
AGCAAGCGGGTCCTGTGCTACAGTTGCAGGAAACGGCGGAGGCGGCGGCA
TTTGCGGTACCGCCTGTCACTCAGTTTCGCGGCACCCTCGATCGTTCTCG
GCTGGATTCTGTCTCCTCCAGCGACGAGTCCAACTCACAGGCTTCGACCT
CGTCGAGGTCCAGTTTTCGACTGAAGCGTAAGTTCCTTCCGCAAGCCTTA
TATGATAACTTCCGAGCCTTCAATCGGCTGCTGACAGACTCCCGTGTGCT
GAGCCAAGCGGACGCGCATCTTTGGGACTGGGATGTTATTACCACCATAC
TGAAGTCGAATTTAATCCGCAAACTGGACTACACCCAAGGAAAGTTCCTG
AAGCGACTCGTGGACTTCTACAAGCCGCGCAATAATCGGTTCTCTCACCA
GGATTTGGTGCCTGGACAGAGGCTGCCTACATATGTCAGTGCCGGATTGG
ATTTAATTGACGTCCTCCTGTCTAGCAATGAGCTTGAATGTATGCGCTTT
ATAACCGACTACTTTTCGGACATCAGCCAACAGCTGGCGGCCGTCACCAC
ATCGAATCGTGCACACGACTGTCTATTTAGTCCACAGCATATGAATAACA
CGATGTGTCAGCAGTATTTCCTCTACATCGGACGCATGTGCCGAACCGTA
AAAGGCATCGAAGTACTCAAAAATACCACCGTATTTGAATACTTGATCAA
TTTGGTGCGGGTGACGGACCACGTCTGCTATGTGAAGCTAATTGTGTCCG
GCCTGAACTACAGCTACGAGAAGCTACCACGTCAGGTGCTGGAAAAGGCG
CTTACGTCGGCGAAGACACGCGGACGTCTGTACTCCACCCAGTTCATGGC
AGTGCTGCTGCGTGCCCGTCTGCCTCACTTTGAGGTATGGGGCATTCCAT
TGATTATCAACCAGACGCGGGATTCGGACCGTAGCGTGGGGCTGGCAGCC
ATGGATGTACTGGAGGAGGCCTGCCACGACAAGTACTACCTGGAGGAGAT
TGTCAGTCGGTGGCCCAATCTAACGCATCGTGGTGATGCAGGACGGCTGC
TGATGGCCCGCTATTATTCACTGCCCCGCGGCCTGAACAGTACGATGGCA
CGAATCGAGGATGAGATCCGCTACTGGCGGAATGGGTACAACAAGCGCTA
CGTGCTCCTCGTGGAAGCCGACACCCACTCAAGCCTGACGCTGCACATCC
GCAATGAGGATGGCTACTACTCGCGTCGCAATTGCAACCAGAGACCACAG
ACTGTACCACCAAACGTTGCACCTCATCTGTACGGGCAAATGGCACAGAC
TGGCCAGGGTATGACAGCTCTGCGGAAGCACGGAGACCTGCCGCAGCTAT
TGGAACTGCTCAGACGCGCCAAATGCACGGACGATGCCGAGTGCCTTGAA
CTGAAGGCCGCCATTTGGGCACTGGCCCACGCCTCAACCCACTCCAATGG
AATTGAATACTTTGTCGAACTGAATGCCAGACTATACGAGAAGCTTATTG
TTCTGGTGACCAAATGCGAGGTATATTCGGTGAGGGCCACCTGTTTTAGT
GCCTTAGGTCTTATCGCAGGCACACAGGCAGGTGCCAATATCCTTTTTAA
GTTGAACTGGCTGAGCGTGCGACATGACAAGAACACAATGTGGCCCGTGC
ATCAGCCGGAGGATTGGATGTCCAGCCAGTACACACCGGTGCGACATTAC
TACGAGGACGTGCCGGCGGACAATATGACCATGATGGATGACTATATAGA
AAGATTCTACGAAACGGGCTCAGACTTTTGGCACATGCTCGCCGATCAGA
CTGATGCGAGTGGTGGTGGTGGGGGTGTAGCCGGCACAGTCGTCGGTATG
CATCCTATAGTGCAGGATCCAAATGCAACGATTACGACCACGGACAGTGT
TCGCACCACGACCGATGATGTGCACCCCAGAATGTTGGTTGGAGTGGCTG
CCAAATCAAAGACTTTGCCAGAAGGTAGCAATCTGCGTCAGGGCAAGCAC
CAACGCTCGCTCTCCGAATCGAAGACCACGGATGTGATCAGCTTGTTGGG
CAGTGGTGTAGGTACGATGTCGGGAGCTGTTCTCTACCCAACGCCGTATC
AGCATCGAATACGCTACAACTCGTGCACGGATTCAAACACTTCCGGCGTT
AGCAGCTGCGAATCGGTGACCGGACGCACTGCAGCTGCATATGCCGCCGC
AGCCAATGAGTTACAGCAATTCCCTTTGAGTCCTATTCCAAGCATGTCCA
ATCTGCTCGAGAGCGATGAGCTGTTTCGTCGAAATCAGCTAGCCACCAGT
ATGCTGCCCTCCACCCTCAGTCCTATGGCGATGAAGGGCTATGTCCAGCT
ACGCTCCCTGCGCAAGCACAGCCGACCCGTATTCTCCGAATCTTCGGCGG
AATTCTACGACTTTGCGGAAATACTGGACACACCAGAGGTTCAGATGCGC
AAGCTCGACTGGACGCATTCCCACCGTCGGCTTAAGGTACGCAGCTTGGA
CCGCCAGCTAAGTGATGTTTATAGACGCCTCTCCGCGGACGAGTTGAATG
TGCTTCTGCCCACGCTTAATGCTCCCAAGTTCCTGCCTCCTAATGATTTG
AAAGGGCCATGCTATGCGGGTATCTGCTTGCCTAAGAACGTTCTGGACCT
GTTTCCGACGCGTAACCTCAGTCGAACGTACGTTTCGCGGGATATCCAGG
ACCAAGATATAGTGGGCATAAATCTGCTGAACACCATGCTACGGCCACAG
TGTCTCAATGACTCACTCACCAATGAGGGCGGCGACGAGTCATCGGTTAT
ATCATCGCTGTCGGACGTCTCGTCTGCAAGTCGGCGACAAACACGACAAT
TGCAGCAAGGCGCCAAGCACTCGCGAAGTCTGTGTCTCCATTGTGCCCGC
TCCCCGCGACAGCAGCGTAATGACAGCGGCAGCCATAGTAATGGTGGAGG
AGGCGCATCCCTCGCTCCCTGCGAGCTGTACAGCAGTGCAGCAGCAGCTC
TGGTGGCAGCCGGCATCCAGGCTGGACCAGTTTTGGCTAAAAAGAGTGGC
TCATCTGCCCAAGGAGCTTCAGCGGCACTTGGCGCCGACATCAGCTTCCA
TTCCCCAGAGAGCATGCTGAGCGAGGATAGCCTGCCGGACAGGCTTACGG
CCTCCATTCTGTACAACGTGCAGCGTCTGGCCAATCCCGTTAGTGCCAAG
CAGTCGAAAATGGCTCTGTTGGAGCTTAAGCAGAAACACCCGCACGCCTT
TCAGGATATTTGCCTTTATTCGGAGGCCTGCAAAACGATAGGCCGGAGTA
GCTATCGGATGATAGCCCGCCGCTTCCTGCAGGAGCTCTTTCTGGACCTT
AATTTTGACTCGTTCTACGTGGAGCCTCAGCTCATAATCGGGGCACGTAA
GTTTTCCGCTGAGGAAAAAGCAGAGGCCACGGCCCCCACGGCAATGCAGG
CCATGCCGTTTAAGCAAACGATTCTCAAGCCTAAACCGGCGGCCCAACTG
GCTAGCGTTTATGAGACTAGTTGGGAGAACCTGCTGATGGACCAGTCGCC
ACGGATAAACAAGTCATCGCCTGCCGATCAACCGGCCAATGCTCAAACGA
AAGCAAAGGCCCGGAACCAGCTGCACATTGACGATACGGAGAGTTCGTTG
TCCAGTACCGATGGCGAAAATGATTCCGGTGAGGATGTTTGCGACGGCAG
TGGAGCCGGCACCCAGGCCAGCTCGGTGACCACCGCTCATACAGCCCTGC
CCACAGGAAACAGCAATCGTAGCAGCATTGGCACATGCACAGCAAGCCAG
CTGGTGCCAGGTGCGGCAACTTCAAACTCCGCTGGTGCTGGGACAAGCGC
ATCTGATAATGCTAGTACAAGTCTAAAGAATGAAAACCGGCAATTCACAC
GCGGACGATTCTATACGCTGGAGCTCGATTTGAGCTGCACCAAGAACAAG
TTTCCCATCAAGAATCGCAGCCAGCGAACACCAACGCCTCCACCAATCGA
AAGTTTAATCGAGTCCAAGCCCACGGTTCAGACAGATGTGAATACAAGTG
CGCTGCCAATTATGCAGCGGACCGGTGGCAGCAATGACTCCTCGTCAGCC
CTAAGATATTCCACTGTGACCAAGAGCTTGTCGGCATCGATGGCCAGGCC
GGTGGGCAGCCTGTACTGCGAGAAGCGCTTGCAGAGCTCCAAATCGGAAG
CGGTCCTCGATGAGGTGGCGAAGGCGAGAAGAGCATCCGGTGGTGTGGGA
CTGACAACTGTGCGTGACAACTCCTAGAAGCTTTCTAGACCAT
BS31466.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:52:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rictor-RA | 5811 | CG8002-PA | 1..5811 | 17..5827 | 28980 | 99.9 | Plus |
| rictor-RC | 5775 | CG8002-PC | 21..5775 | 73..5827 | 28685 | 99.9 | Plus |
| rictor-RB | 5751 | CG8002-PB | 1712..5751 | 1788..5827 | 20185 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:52:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rictor-RA | 6612 | CG8002-RA | 191..6002 | 17..5828 | 28985 | 99.9 | Plus |
| rictor-RC | 6485 | CG8002-RC | 120..5875 | 73..5828 | 28690 | 99.9 | Plus |
| rictor-RB | 6552 | CG8002-RB | 1902..5942 | 1788..5828 | 20190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:52:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19252721..19253746 | 5828..4803 | 5130 | 100 | Minus |
| X | 23542271 | X | 19254603..19255521 | 4074..3156 | 4595 | 100 | Minus |
| X | 23542271 | X | 19257291..19258154 | 1855..992 | 4275 | 99.7 | Minus |
| X | 23542271 | X | 19255818..19256606 | 3030..2242 | 3945 | 100 | Minus |
| X | 23542271 | X | 19253801..19254540 | 4805..4066 | 3685 | 99.9 | Minus |
| X | 23542271 | X | 19258826..19259373 | 838..291 | 2740 | 100 | Minus |
| X | 23542271 | X | 19256775..19256985 | 2241..2031 | 1055 | 100 | Minus |
| X | 23542271 | X | 19259436..19259648 | 291..79 | 1050 | 99.5 | Minus |
| X | 23542271 | X | 19257047..19257225 | 2032..1854 | 880 | 99.4 | Minus |
| X | 23542271 | X | 19258213..19258366 | 991..838 | 770 | 100 | Minus |
| X | 23542271 | X | 19255591..19255717 | 3155..3029 | 635 | 100 | Minus |
| X | 23542271 | X | 19260987..19261050 | 80..17 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:52:19 has no hits.
BS31466.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 18:25:45 Download gff for
BS31466.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rictor-RA | 177..5987 | 17..5827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:01 Download gff for
BS31466.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rictor-RA | 191..6001 | 17..5827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:52:36 Download gff for
BS31466.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rictor-RA | 191..6001 | 17..5827 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:52:36 Download gff for
BS31466.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19257047..19257223 | 1856..2032 | 99 | <- | Minus |
| X | 19252722..19253744 | 4805..5827 | 100 | <- | Minus |
| X | 19253802..19254531 | 4075..4804 | 100 | <- | Minus |
| X | 19254603..19255521 | 3156..4074 | 100 | <- | Minus |
| X | 19255591..19255715 | 3031..3155 | 100 | <- | Minus |
| X | 19255818..19256606 | 2242..3030 | 100 | <- | Minus |
| X | 19256775..19256983 | 2033..2241 | 100 | <- | Minus |
| X | 19257291..19258154 | 992..1855 | 99 | <- | Minus |
| X | 19258213..19258366 | 838..991 | 100 | <- | Minus |
| X | 19258827..19259372 | 292..837 | 100 | <- | Minus |
| X | 19259436..19259646 | 81..291 | 99 | <- | Minus |
| X | 19260987..19261050 | 17..80 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:01 Download gff for
BS31466.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19149624..19149748 | 3031..3155 | 100 | <- | Minus |
| arm_X | 19146755..19147777 | 4805..5827 | 100 | <- | Minus |
| arm_X | 19147835..19148564 | 4075..4804 | 100 | <- | Minus |
| arm_X | 19148636..19149554 | 3156..4074 | 100 | <- | Minus |
| arm_X | 19149851..19150639 | 2242..3030 | 100 | <- | Minus |
| arm_X | 19150808..19151016 | 2033..2241 | 100 | <- | Minus |
| arm_X | 19151080..19151256 | 1856..2032 | 99 | <- | Minus |
| arm_X | 19151324..19152187 | 992..1855 | 99 | <- | Minus |
| arm_X | 19152246..19152399 | 838..991 | 100 | <- | Minus |
| arm_X | 19152860..19153405 | 292..837 | 100 | <- | Minus |
| arm_X | 19153469..19153679 | 81..291 | 99 | <- | Minus |
| arm_X | 19155020..19155083 | 17..80 | 100 | | Minus |
BS31466.pep Sequence
Translation from 16 to 5826
> BS31466.pep
MASQHSSWRFGKRSKLQLRIKVSQDPEDFYRLDPQRSAAENAFEIYSMLC
LEETRDTKRLFLLNALASLCLGARKGSHHSNIRFTTEELLYCLSASLVHT
FTQVRAAALRTIRYAISTPNDIKTFNALQLQHLLCRSIDLMLKNDDERVQ
ALKLVRKMLAIAPEDISPAVVRCLVSLADSGIEENDNLLRACLATLAEFA
VLNPALLIVCGGVTSITRNVLECHNPRIAESLCGVLLYLLEWPQTRNICG
VRLDCLAAPYCDFTYRQSIVDKNKDARELRYTSCRLALLSVLRSWTGTLE
FCDPSKPSGLKAIVDALYLNQIEVRKAILDLLYELLTLPQPTWTDDYAVA
LQAVDPSDFQDTWLLSNGFVSAEGRSILPTLAARAPSVVEQHLALMLYCF
LETGLLNALVEVVVSSDQFVSVQATVLIGKILQLMHTHLPPDICCTSPAL
PTLVSHATLGNQQANAAVAALQNYQKLLRQRPASRSLFLDSIIQGGALIQ
TRLFRRHLNVQEQAGPVLQLQETAEAAAFAVPPVTQFRGTLDRSRLDSVS
SSDESNSQASTSSRSSFRLKRKFLPQALYDNFRAFNRLLTDSRVLSQADA
HLWDWDVITTILKSNLIRKLDYTQGKFLKRLVDFYKPRNNRFSHQDLVPG
QRLPTYVSAGLDLIDVLLSSNELECMRFITDYFSDISQQLAAVTTSNRAH
DCLFSPQHMNNTMCQQYFLYIGRMCRTVKGIEVLKNTTVFEYLINLVRVT
DHVCYVKLIVSGLNYSYEKLPRQVLEKALTSAKTRGRLYSTQFMAVLLRA
RLPHFEVWGIPLIINQTRDSDRSVGLAAMDVLEEACHDKYYLEEIVSRWP
NLTHRGDAGRLLMARYYSLPRGLNSTMARIEDEIRYWRNGYNKRYVLLVE
ADTHSSLTLHIRNEDGYYSRRNCNQRPQTVPPNVAPHLYGQMAQTGQGMT
ALRKHGDLPQLLELLRRAKCTDDAECLELKAAIWALAHASTHSNGIEYFV
ELNARLYEKLIVLVTKCEVYSVRATCFSALGLIAGTQAGANILFKLNWLS
VRHDKNTMWPVHQPEDWMSSQYTPVRHYYEDVPADNMTMMDDYIERFYET
GSDFWHMLADQTDASGGGGGVAGTVVGMHPIVQDPNATITTTDSVRTTTD
DVHPRMLVGVAAKSKTLPEGSNLRQGKHQRSLSESKTTDVISLLGSGVGT
MSGAVLYPTPYQHRIRYNSCTDSNTSGVSSCESVTGRTAAAYAAAANELQ
QFPLSPIPSMSNLLESDELFRRNQLATSMLPSTLSPMAMKGYVQLRSLRK
HSRPVFSESSAEFYDFAEILDTPEVQMRKLDWTHSHRRLKVRSLDRQLSD
VYRRLSADELNVLLPTLNAPKFLPPNDLKGPCYAGICLPKNVLDLFPTRN
LSRTYVSRDIQDQDIVGINLLNTMLRPQCLNDSLTNEGGDESSVISSLSD
VSSASRRQTRQLQQGAKHSRSLCLHCARSPRQQRNDSGSHSNGGGGASLA
PCELYSSAAAALVAAGIQAGPVLAKKSGSSAQGASAALGADISFHSPESM
LSEDSLPDRLTASILYNVQRLANPVSAKQSKMALLELKQKHPHAFQDICL
YSEACKTIGRSSYRMIARRFLQELFLDLNFDSFYVEPQLIIGARKFSAEE
KAEATAPTAMQAMPFKQTILKPKPAAQLASVYETSWENLLMDQSPRINKS
SPADQPANAQTKAKARNQLHIDDTESSLSSTDGENDSGEDVCDGSGAGTQ
ASSVTTAHTALPTGNSNRSSIGTCTASQLVPGAATSNSAGAGTSASDNAS
TSLKNENRQFTRGRFYTLELDLSCTKNKFPIKNRSQRTPTPPPIESLIES
KPTVQTDVNTSALPIMQRTGGSNDSSSALRYSTVTKSLSASMARPVGSLY
CEKRLQSSKSEAVLDEVAKARRASGGVGLTTVRDNS*
BS31466.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:15:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rictor-PA | 1936 | CG8002-PA | 1..1936 | 1..1936 | 9933 | 100 | Plus |
| rictor-PC | 1924 | CG8002-PC | 8..1924 | 20..1936 | 9834 | 100 | Plus |
| rictor-PB | 1916 | CG8002-PB | 1..1916 | 1..1936 | 9792 | 98.9 | Plus |
