Clone BS31510 Report

Search the DGRC for BS31510

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:315
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptNup75-RA
Protein status:BS31510.pep: gold
Sequenced Size:2039

Clone Sequence Records

BS31510.complete Sequence

2039 bp assembled on 2013-01-22

GenBank Submission: KX804312

> BS31510.complete
GAAGTTATCAGTCGACATGAGCGACAGCGGTGTTTTCGCCTTCGAGCTTG
GCGATGACCTAGCCACACGCTGTGGCAATACACTCACTGGCGTCTTTGTG
CCGGGCTCACGAATCGCACTCAGCGCCTACCGGCATGTGACGCACAGTTC
GCGGGATGAGCCCACAGAGAATGCTGGACAGGTTCCGGTGCTCATCTACA
TGGCGCAGGAGTCGACGCTGTTCGACGAACCCGTTCTCCGCAGCGTACTC
GCCGAGGCGAATGCCACGTTCGCCACGCTGCAACAGTTGGGTTCGCGGGC
CACACGTGCCGAGTATGTGAATATATCCCGGGCATACAGGAGCATTGTGC
GCTCATGCCTGGAGAAGCTGGAGCAGGCAAAAAAATCGCCGGAGGTTCAG
ACAGATGAGGCGCGCCTGCAACGCTTATGTGATGCCATCGTTGTGTTCTA
TGCGGCAGAATGCCTGTGGCATCTCTTCGAGATTCTGTACATTCAGAGCA
ATCAGCTGGTGGTGCCGCAGCTGCTCGACTGGGCGCGTTTCCACTCGCCG
CACGCAGAGGACAGAGCCACGGATCTACTGCTCATGGGAGAGGAGGCCAG
CGAATCTGATGACTATTGGAGCATTGTCAAATCACTCATTATGCTGGGCG
AAATAGATGTTACGAGAGCAGTTCTCTCGCAGAATCGCAAAGCTGGACAA
ACGAGCTTCAAGGCGGCCGAACAGATCCTGAAGTCCATGCCAGTGTATCA
AGAGGGCTATGCCCTGCAGAAGTTTCACTCGCAGTGGGAGTTCTGGCACG
TGGATACGGAACGCAAGATTCAGTCCGGCTTATTTGCCACGGAGCCGGAG
CTGGAGCAGTTGATTCGTCTGGTCGCCGGCGACAGCGAGCAGTGGGATGC
TGGCATCAAAGAGTCCCAGGATTTCTATGAATACCTGCCAGGATACCTGC
TCTTTACCAAGCCCACCTGCAAACCCTTTGAGCTGAAAATAGCGGCAGCC
AAATGGCTAAACCGATGGTGTCTTCTCCGGCCGGAAAGAGAGCAGTGCAG
CATGAACCGCATGGTTTCTCAGCTTATGGATCACGATCTTAGACTATTTA
TATACGATGCTCAAAAACTTAACGACACACACTGGTTCTCAACGCATTTG
ATTGATCTTATCCATCATTGTGGTCAGCTGAAGAGCTATTTCGATCAGAA
CAACATCGATCTTCCGGCCCTGCGTCACTCAATGATCTATGAGTACGGCA
GCTATCTGATGACGTCCCACAATATGTGGCAACTGGGCATCGACTATCTG
GACTGTTGCAAGCAGGAGGGTCAGGCGGCTATCGAGCTGCTTTTGCCCCG
AATCACTTTGCGCAGCGAGCGGCAAGCCACCAAGCTTATTAACCTGGCCA
GGCAGCGCGGGCTCATAAGCGTAGAACGGGAGATCTGCAAGGTGCTTTCA
AAGCGATCCTACGATAACGAGCGTTATGGAAACGCCCTGGAATGGGCCAT
TCGCTCCAAGGATGTGCTGCTGGTTACGGCGGTAGCTGACTTTATTTTAA
AGCATTACTCGAAAACTGGCTGCATGCTTTGCCCGGACACCATTGCCAAT
GTCGGTGGCCGAATGTTTGCCTCACCGCGCTTGGTGTTTCTCTCCAAGTA
CTTTGAGTTCTATGAGTTCTACCGTACCCGTGATTTTCTTTCTGCCTCCG
AGCTGCTGGTGAATCTTTTGGAATCCAAAATTACGCCAGACTACTTTTGG
CCATCGTTGCTCATCGATTCCATGCCACTGCTAGAGTCCAAAGATCCGAA
GATCTTCGCCAAGGAAACGGTGGCCATTCTGCATCACATTGAAACCGATC
TGGTGCCCATCATCGAACGCGATGTGTCCAAATATGGAAAACACCACACA
GAAACCGTGTTCAAGGACTATCGGGTGGAGAACGTTGACGAAATCATGAA
CCTCCTGCGCCTGGCCTGCGCACGCAATTTGGCCCGAGCATTGATCATTG
AGAACACTTTGCCCGTGGTGTGAAAGCTTTCTAGACCAT

BS31510.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
Nup75-RA 2007 CG5733-PA 1..2007 17..2023 10035 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:09:49
Subject Length Description Subject Range Query Range Score Percent Strand
Nup75-RA 2146 CG5733-RA 68..2076 15..2023 10045 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:09:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18165825..18166987 1206..44 5815 100 Minus
2R 25286936 2R 18165418..18165767 1552..1203 1735 99.7 Minus
2R 25286936 2R 18165160..18165352 1743..1551 965 100 Minus
2R 25286936 2R 18164955..18165102 1891..1744 740 100 Minus
2R 25286936 2R 18164764..18164895 2023..1892 660 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:09:47 has no hits.

BS31510.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-22 18:21:46 Download gff for BS31510.complete
Subject Subject Range Query Range Percent Splice Strand
Nup75-RA 59..2064 17..2022 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:32 Download gff for BS31510.complete
Subject Subject Range Query Range Percent Splice Strand
Nup75-RA 70..2075 17..2022 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:22:28 Download gff for BS31510.complete
Subject Subject Range Query Range Percent Splice Strand
Nup75-RA 70..2075 17..2022 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:22:28 Download gff for BS31510.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18164765..18164895 1892..2022 100 <- Minus
2R 18164955..18165102 1744..1891 100 <- Minus
2R 18165160..18165350 1553..1743 100 <- Minus
2R 18165418..18165763 1207..1552 100 <- Minus
2R 18165825..18166987 44..1206 100 <- Minus
2R 18167045..18167071 17..43 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:32 Download gff for BS31510.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14052270..14052400 1892..2022 100 <- Minus
arm_2R 14052460..14052607 1744..1891 100 <- Minus
arm_2R 14052665..14052855 1553..1743 100 <- Minus
arm_2R 14052923..14053268 1207..1552 100 <- Minus
arm_2R 14053330..14054492 44..1206 100 <- Minus
arm_2R 14054550..14054576 17..43 100   Minus

BS31510.pep Sequence

Translation from 16 to 2022

> BS31510.pep
MSDSGVFAFELGDDLATRCGNTLTGVFVPGSRIALSAYRHVTHSSRDEPT
ENAGQVPVLIYMAQESTLFDEPVLRSVLAEANATFATLQQLGSRATRAEY
VNISRAYRSIVRSCLEKLEQAKKSPEVQTDEARLQRLCDAIVVFYAAECL
WHLFEILYIQSNQLVVPQLLDWARFHSPHAEDRATDLLLMGEEASESDDY
WSIVKSLIMLGEIDVTRAVLSQNRKAGQTSFKAAEQILKSMPVYQEGYAL
QKFHSQWEFWHVDTERKIQSGLFATEPELEQLIRLVAGDSEQWDAGIKES
QDFYEYLPGYLLFTKPTCKPFELKIAAAKWLNRWCLLRPEREQCSMNRMV
SQLMDHDLRLFIYDAQKLNDTHWFSTHLIDLIHHCGQLKSYFDQNNIDLP
ALRHSMIYEYGSYLMTSHNMWQLGIDYLDCCKQEGQAAIELLLPRITLRS
ERQATKLINLARQRGLISVEREICKVLSKRSYDNERYGNALEWAIRSKDV
LLVTAVADFILKHYSKTGCMLCPDTIANVGGRMFASPRLVFLSKYFEFYE
FYRTRDFLSASELLVNLLESKITPDYFWPSLLIDSMPLLESKDPKIFAKE
TVAILHHIETDLVPIIERDVSKYGKHHTETVFKDYRVENVDEIMNLLRLA
CARNLARALIIENTLPVV*

BS31510.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:04:46
Subject Length Description Subject Range Query Range Score Percent Strand
Nup75-PA 668 CG5733-PA 1..668 1..668 3477 100 Plus