BS31517.complete Sequence
1049 bp assembled on 2012-08-22
GenBank Submission: KX801580
> BS31517.complete
GAAGTTATCAGTCGACATGACGGAGTACTGGAAATCAAACGAGCGCAAGT
TCTGCGACTTCTGCAAATGCTGGCTGAGCGACAACAAGGCGAGCGTCGCC
TTCCACGAGAGTGGCAAGCGGCACAAGATGAATGTGGCCAAGCGGATCAC
GGACATCAGTCGCAACAGCGAGAAATCGGAGCGGGAGCGCCAGAAAATGG
ACGCGGAGATCCGCAAGATGGAGGAGGCGGCCATGAAGTCGTACGCACAG
GATGTCCATTCGCGCGGTGACATGACCGCCAGGTCCATTAACACGGTAAT
GAGGGCCACCGCCACTGCTGCCGCCTCAGGCGGAGCTCACTCCTTCGCCG
GAAGATCACGCCAAGTGGACCCCATGCGCCTGGAAGGATTGTCCGACGAA
GAAGAAGACCAGAGGCGGGTGGCTCCCGGCAAGGTAACAAGCGACGCAGC
CGTGCCCGAGGCATCCCTCTGGGTGGAGGGCAAGTCGGACGAGGGACACA
CCTACTATTGGAACGTGAAGACCAATGAATCCGTGTGGAAGCCGCCGAAA
GAGGGCTATCTGTCCTACGAGGAGTACGAGCGCATCAACCAGCTGGCCAT
CGACCAGCAGCAGATCTCCCAGGCCGAGGAATCGCTGAAATTCCGCGCCA
ATGTCGACGAGGAAGTGGCGAGGGTGAACCGAGAGAAGATGAAAGCCTTC
CGCAGGACGGACAATCCCAAGGAAAAGAAGCAGAAGGAGGAGAGGCGTCA
GACATTCAAAACGGAGGAAGAGGCGGCCACCAAAGAGATTGGACAGTGGC
AAACTGTGGAAGTGAAAGCACCTGAGCAGCCCATCGACTGGCAGCTACCC
AAAACGGATTACTACAGTGCTGCGCCCGTGGTTTCCGCCTCGAGTGAACC
AGAACCTCCAGTCAAAAAGTTCAAGGAGAAGACGATTGGCGGTCTGGATG
AGGAGATAGCCGCCACTGCGCCCGCCACGTTCAAGCGGAAATTCATCAGG
AAGGGAAACAGCCGCCAGCGCGCCGAGGATTAAAAGCTTTCTAGACCAT
BS31517.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:32:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4291-RB | 1017 | CG4291-PB | 1..1017 | 17..1033 | 5055 | 99.8 | Plus |
| CG4291-RA | 1017 | CG4291-PA | 1..1017 | 17..1033 | 5055 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:32:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4291-RB | 1310 | CG4291-RB | 101..1118 | 16..1033 | 5060 | 99.8 | Plus |
| CG4291-RA | 1245 | CG4291-RA | 101..1118 | 16..1033 | 5060 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:32:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 851718..852443 | 816..91 | 3630 | 100 | Minus |
| 2L | 23513712 | 2L | 851443..851659 | 1033..817 | 1055 | 99.1 | Minus |
| 2L | 23513712 | 2L | 852499..852575 | 91..15 | 370 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:32:01 has no hits.
BS31517.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:26:43 Download gff for
BS31517.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4291-RA | 81..1095 | 17..1031 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:32 Download gff for
BS31517.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4291-RA | 102..1116 | 17..1031 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:06:14 Download gff for
BS31517.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4291-RA | 102..1116 | 17..1031 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:06:14 Download gff for
BS31517.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 851445..851659 | 817..1031 | 99 | <- | Minus |
| 2L | 851718..852442 | 92..816 | 100 | <- | Minus |
| 2L | 852499..852573 | 17..91 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:32 Download gff for
BS31517.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 851445..851659 | 817..1031 | 99 | <- | Minus |
| arm_2L | 851718..852442 | 92..816 | 100 | <- | Minus |
| arm_2L | 852499..852573 | 17..91 | 98 | | Minus |
BS31517.pep Sequence
Translation from 16 to 1032
> BS31517.pep
MTEYWKSNERKFCDFCKCWLSDNKASVAFHESGKRHKMNVAKRITDISRN
SEKSERERQKMDAEIRKMEEAAMKSYAQDVHSRGDMTARSINTVMRATAT
AAASGGAHSFAGRSRQVDPMRLEGLSDEEEDQRRVAPGKVTSDAAVPEAS
LWVEGKSDEGHTYYWNVKTNESVWKPPKEGYLSYEEYERINQLAIDQQQI
SQAEESLKFRANVDEEVARVNREKMKAFRRTDNPKEKKQKEERRQTFKTE
EEAATKEIGQWQTVEVKAPEQPIDWQLPKTDYYSAAPVVSASSEPEPPVK
KFKEKTIGGLDEEIAATAPATFKRKFIRKGNSRQRAED*
BS31517.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:24:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4291-PB | 338 | CG4291-PB | 1..338 | 1..338 | 1758 | 100 | Plus |
| CG4291-PA | 338 | CG4291-PA | 1..338 | 1..338 | 1758 | 100 | Plus |
