Clone BS31527 Report

Search the DGRC for BS31527

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:315
Well:27
Vector:pDNR-Dual
Associated Gene/TranscriptCG14301-RB
Protein status:BS31527.pep: full length peptide match
Sequenced Size:623

Clone Sequence Records

BS31527.complete Sequence

623 bp assembled on 2012-08-22

GenBank Submission: KX804772

> BS31527.complete
GAAGTTATCAGTCGACATGTTGCCGAGAATAACTTTTGTGTTCATCATCA
TTTGTGGATATTTATTATATACTGATTGCCATGAAACAGTTCGTTCCAAG
CGAGCCAAACGCCCACGAGCTCCGGAACCGGTAAACTTTGAGCCGGAGCC
GCAGCAGGATCTGGAGAACGATGAGAATGGCAGTCAGGAGAAGGATCTTC
CGGAGATACCGGACAACTTTCTTAGCCCCTCGGTTCGGGAGTATCTCGAG
CTGGGCAAATCCATTCCCGGTCGTCCTGGCGTTGACTATCCCATACTGTC
GGCGGTGCCGTACACCAACTTTTACTGCGACGAGCAGGAGTATCCTGGAT
TCTTTGCCGACATGGAGACAAGGTGTCAGGGCTGGCATTACTGCGACATC
GATGGACGACAGGCCACGTTCCTCTGCCCAAATGGCACACAGTTCTCACA
GGCGGTCTTCGTCTGCGACTGGTGGTTCAATGTGCGCTGCGATCTCTCAC
CCCGGCTGTATGCCATTAACGCCCGGCTCTATCAGCGCCCCAAGGTGAAT
CCCACTCGACCACATCGCATCATCACCAAACAACTGGTCGAGGACATCTT
CACCTGAAAGCTTTCTAGACCAT

BS31527.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:32:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14301-RB 591 CG14301-PB 1..591 17..607 2955 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:32:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14301-RB 1846 CG14301-RB 732..1324 15..607 2965 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:32:14
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18629673..18629900 607..380 1140 100 Minus
3R 32079331 3R 18630718..18630915 271..74 990 100 Minus
3R 32079331 3R 18629978..18630090 381..269 565 100 Minus
3R 32079331 3R 18640667..18640726 74..15 300 100 Minus
Blast to na_te.dros performed on 2014-11-28 12:32:15 has no hits.

BS31527.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:26:45 Download gff for BS31527.complete
Subject Subject Range Query Range Percent Splice Strand
CG14301-RB 739..1323 22..606 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:37 Download gff for BS31527.complete
Subject Subject Range Query Range Percent Splice Strand
CG14301-RB 739..1323 22..606 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:06:21 Download gff for BS31527.complete
Subject Subject Range Query Range Percent Splice Strand
CG14301-RB 739..1323 22..606 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:06:21 Download gff for BS31527.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18629674..18629899 381..606 100 <- Minus
3R 18629979..18630089 270..380 100 <- Minus
3R 18630720..18630914 75..269 100 <- Minus
3R 18640667..18640719 22..74 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:37 Download gff for BS31527.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14455396..14455621 381..606 100 <- Minus
arm_3R 14455701..14455811 270..380 100 <- Minus
arm_3R 14456442..14456636 75..269 100 <- Minus
arm_3R 14466389..14466441 22..74 100   Minus

BS31527.pep Sequence

Translation from 16 to 606

> BS31527.pep
MLPRITFVFIIICGYLLYTDCHETVRSKRAKRPRAPEPVNFEPEPQQDLE
NDENGSQEKDLPEIPDNFLSPSVREYLELGKSIPGRPGVDYPILSAVPYT
NFYCDEQEYPGFFADMETRCQGWHYCDIDGRQATFLCPNGTQFSQAVFVC
DWWFNVRCDLSPRLYAINARLYQRPKVNPTRPHRIITKQLVEDIFT*

BS31527.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:25:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG14301-PB 196 CG14301-PB 1..196 1..196 1087 100 Plus
CG14304-PC 942 CG14304-PC 650..738 85..173 332 58.4 Plus
CG14304-PB 1136 CG14304-PB 844..932 85..173 332 58.4 Plus
CG14304-PA 1136 CG14304-PA 844..932 85..173 332 58.4 Plus
CG13675-PC 151 CG13675-PC 55..143 88..176 257 52.8 Plus