BS31527.complete Sequence
623 bp assembled on 2012-08-22
GenBank Submission: KX804772
> BS31527.complete
GAAGTTATCAGTCGACATGTTGCCGAGAATAACTTTTGTGTTCATCATCA
TTTGTGGATATTTATTATATACTGATTGCCATGAAACAGTTCGTTCCAAG
CGAGCCAAACGCCCACGAGCTCCGGAACCGGTAAACTTTGAGCCGGAGCC
GCAGCAGGATCTGGAGAACGATGAGAATGGCAGTCAGGAGAAGGATCTTC
CGGAGATACCGGACAACTTTCTTAGCCCCTCGGTTCGGGAGTATCTCGAG
CTGGGCAAATCCATTCCCGGTCGTCCTGGCGTTGACTATCCCATACTGTC
GGCGGTGCCGTACACCAACTTTTACTGCGACGAGCAGGAGTATCCTGGAT
TCTTTGCCGACATGGAGACAAGGTGTCAGGGCTGGCATTACTGCGACATC
GATGGACGACAGGCCACGTTCCTCTGCCCAAATGGCACACAGTTCTCACA
GGCGGTCTTCGTCTGCGACTGGTGGTTCAATGTGCGCTGCGATCTCTCAC
CCCGGCTGTATGCCATTAACGCCCGGCTCTATCAGCGCCCCAAGGTGAAT
CCCACTCGACCACATCGCATCATCACCAAACAACTGGTCGAGGACATCTT
CACCTGAAAGCTTTCTAGACCAT
BS31527.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:32:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14301-RB | 591 | CG14301-PB | 1..591 | 17..607 | 2955 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:32:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14301-RB | 1846 | CG14301-RB | 732..1324 | 15..607 | 2965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:32:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18629673..18629900 | 607..380 | 1140 | 100 | Minus |
3R | 32079331 | 3R | 18630718..18630915 | 271..74 | 990 | 100 | Minus |
3R | 32079331 | 3R | 18629978..18630090 | 381..269 | 565 | 100 | Minus |
3R | 32079331 | 3R | 18640667..18640726 | 74..15 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:32:15 has no hits.
BS31527.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:26:45 Download gff for
BS31527.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14301-RB | 739..1323 | 22..606 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:37 Download gff for
BS31527.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14301-RB | 739..1323 | 22..606 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:06:21 Download gff for
BS31527.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14301-RB | 739..1323 | 22..606 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:06:21 Download gff for
BS31527.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18629674..18629899 | 381..606 | 100 | <- | Minus |
3R | 18629979..18630089 | 270..380 | 100 | <- | Minus |
3R | 18630720..18630914 | 75..269 | 100 | <- | Minus |
3R | 18640667..18640719 | 22..74 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:37 Download gff for
BS31527.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14455396..14455621 | 381..606 | 100 | <- | Minus |
arm_3R | 14455701..14455811 | 270..380 | 100 | <- | Minus |
arm_3R | 14456442..14456636 | 75..269 | 100 | <- | Minus |
arm_3R | 14466389..14466441 | 22..74 | 100 | | Minus |
BS31527.pep Sequence
Translation from 16 to 606
> BS31527.pep
MLPRITFVFIIICGYLLYTDCHETVRSKRAKRPRAPEPVNFEPEPQQDLE
NDENGSQEKDLPEIPDNFLSPSVREYLELGKSIPGRPGVDYPILSAVPYT
NFYCDEQEYPGFFADMETRCQGWHYCDIDGRQATFLCPNGTQFSQAVFVC
DWWFNVRCDLSPRLYAINARLYQRPKVNPTRPHRIITKQLVEDIFT*
BS31527.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:25:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14301-PB | 196 | CG14301-PB | 1..196 | 1..196 | 1087 | 100 | Plus |
CG14304-PC | 942 | CG14304-PC | 650..738 | 85..173 | 332 | 58.4 | Plus |
CG14304-PB | 1136 | CG14304-PB | 844..932 | 85..173 | 332 | 58.4 | Plus |
CG14304-PA | 1136 | CG14304-PA | 844..932 | 85..173 | 332 | 58.4 | Plus |
CG13675-PC | 151 | CG13675-PC | 55..143 | 88..176 | 257 | 52.8 | Plus |