BS31534.complete Sequence
2330 bp assembled on 2012-09-28
GenBank Submission: KX800822
> BS31534.complete
GAAGTTATCAGTCGACATGCAGACGTCATCGTCGCGAACCGCGGACAAGA
CCAAGCGTAGGATTAGAATAGTAGTGTCCGAAAACCACAACGTAGCTGCT
AGTAGTGTTGCACCTGCACCACCCACAACCGCCTTCAACACCACCACCCA
TCACCAAATACCGAGGGAATCCGATATCGAGACGAAGCGGCTAAACATCG
ACTACGGCGATGAGGGCAGCGCCGATTGGGATAAGGACCGCGAGGTGCTC
ATCCTGTCTGGGAGACGGAACAAGAATGATAAAAACTGGGAGAACTGGGA
GCGCATCCGGGAGCAGAAGCTGGAGAAGATGAAGGGCATTTGTTTCGAGA
GCTATCGCCAGTCCAAGCGGGACAAGTTACTTCAAGCTAAGCCACGACCC
AAACAACTTGATTCCACCTGGTATACGGATAACATCTACTCGAACCGCTC
CGATGACATGGACGAGGACTACGTGCCTGATTGCTTGAAATACGGACCTT
TCCGCACACTGAGGGACATCCACGAGCTGGACGAGAAGAGTGGGGTTACG
GAAGAACGTCGTGTTGAGGGTGAAGGATCCCCCGGCTATGGCCTGCATCG
TTCCAAGAGCTGCAAGGAGTTTCAATACCCCAAGTCACAGAGTTGGTGCT
TCGAGGGCAATGTTTTTGAAGCTGGCGGCGGTGTGGCCAGCGGGAGTGGT
AGTTCAAGCGGTGCTCCCCCACCAACCACCTCCATCCTGAAGAATCGAGC
AGGTGTTCCCAAGTCATACTCCTTCAGTGCCACCACTAAGACCATGCCGT
TTGATATCATCGACTATGAGCTGCCTCCTGTCTCGAATACGCGACGGGAG
AAGAAGGAGGCTCTAAGGCGGAACATGAATGCCCTCTGCAGCAGCAGCCT
GGATCGATGTTGCGCCCGGGATCAGTGCACCAGCGCCCGCTGCCTGTTGG
AGGACATCTATCCGGGATCGAGGATGCGACCAAGGACAACCGGGGCGGGC
AGCAATCGAAATCTAAGTGCGGCGGATTGGCTATTCGAGGAGCGGGCTGG
AAGGCAGAGAACGCCCGCCGCTCCAACGGTTATTTGTTGTTGCTCTGCGG
CGGAGGATTGTTGTTGCCATCGCCAGCGGCAGCAGCAACCGCCACTTCCC
GCTCGCCCAAGATCACGACCCCTATGTCCCGGTCATCATCCCGCCGCCGA
GGAGGAGGAGCACATGCACTGCCGTTATGACACCGACCTGGAGCACTTCA
TACGCGCCGAGCGCGAGCGCCTCATGCTGCAGGATAAGTTCCTGGACGAT
GATGAGCGGTATTTAGCCGCTGCTCCGGCTCCGCGTAGTCCTGGCAGACG
GTATCCGGCGGGAAACTATCACCGGCCTCCGCGCAGCAAGTCACTGTTGG
AGATGCAGCCGCCAACAATTCTGTACGACGAGGACACCTGTTCGGACACC
ACAGAGATCGATTTGGAGGACTTCAACATTGACCTGGAAAAGTACTGGGA
GCAGCTGGACAAGCCACCCAGTCCCATCAACATGGACATGCGGCGGAACA
TGCATAGCAGTCTCAAGGTGAAGAACGTGAATGTCCGGTGCTACAACAAT
GGCCAGCCCATCGATCTGCATGACCGTGAGCATGAGCGGCTGATGATCAA
GAAATCGCTGCTCGAGGGGATGCCCTCGCCACCGCAGCTGGACTCCAGCG
AGTCCTCGACCAATGCGGGCGGCTATCCTTTTTTTGACACCGCTCCCGCC
GTTGCGCCTGCCCCCGCCTTCCACCACCATCCGGCCTACGGACAACCGCA
GGGCTATGGCCACAAGGTGTATCCCACGGTGGACACGCTGCCCTCTTATC
AGTACAACAACTTCTACCCCGAGCACAGCCATCCGACCGTGGGAAGTGTG
CTGACTCAGCAGCCGACAGCTGGTATCCATCATCCATCCGCCGGCGGTCA
CTCGGCGCTCAGCCTGATCAACAACATATTTTCAATCTACAAGCCCAACA
AGTACTCGCCGGAGAACTGCCAGATGAACTACGAGAGCAAGCCGGAACCG
TGCAAGAAGATGAATGTGCCCAGTACCCACAGGCCCCTGGGAGCAGCCGC
GCATCCGTATCCTGCCCACGACTACATGCACTCTTCGATGAAGAGACCGC
TGCTGGTGAGCGCCGATCAGCCGCACTTTAAGATCATTCCGGAAAAGACT
GGGCTAAAGATCTCGCCTCTGCTGAGCTACGAGGATTACGGCGGAGGTGG
AGGTGGCGAGAAGGCGCACCACAGACTGACTAGCACGGCAAGGCCTCTGA
TGCTTCCGCACTGAAAGCTTTCTAGACCAT
BS31534.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:23:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43729-RJ | 5856 | CG43729-PJ | 3558..5856 | 16..2314 | 11495 | 100 | Plus |
| CG43729-RI | 5856 | CG43729-PI | 3558..5856 | 16..2314 | 11495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:23:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43729-RV | 11050 | CG43729-RV | 6954..9252 | 16..2314 | 11495 | 100 | Plus |
| CG43729-RU | 10723 | CG43729-RU | 6627..8925 | 16..2314 | 11495 | 100 | Plus |
| CG43729-RO | 10924 | CG43729-RO | 6828..9126 | 16..2314 | 11495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:23:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15466995..15469293 | 16..2314 | 11495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:23:14 has no hits.
BS31534.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-28 18:20:33 Download gff for
BS31534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34318-RB | 751..3047 | 17..2313 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:19 Download gff for
BS31534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43729-RI | 6859..9155 | 17..2313 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:03:06 Download gff for
BS31534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43729-RO | 6829..9125 | 17..2313 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:03:06 Download gff for
BS31534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15466996..15469292 | 17..2313 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:19 Download gff for
BS31534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11354501..11356797 | 17..2313 | 100 | | Plus |
BS31534.pep Sequence
Translation from 16 to 2313
> BS31534.pep
MQTSSSRTADKTKRRIRIVVSENHNVAASSVAPAPPTTAFNTTTHHQIPR
ESDIETKRLNIDYGDEGSADWDKDREVLILSGRRNKNDKNWENWERIREQ
KLEKMKGICFESYRQSKRDKLLQAKPRPKQLDSTWYTDNIYSNRSDDMDE
DYVPDCLKYGPFRTLRDIHELDEKSGVTEERRVEGEGSPGYGLHRSKSCK
EFQYPKSQSWCFEGNVFEAGGGVASGSGSSSGAPPPTTSILKNRAGVPKS
YSFSATTKTMPFDIIDYELPPVSNTRREKKEALRRNMNALCSSSLDRCCA
RDQCTSARCLLEDIYPGSRMRPRTTGAGSNRNLSAADWLFEERAGRQRTP
AAPTVICCCSAAEDCCCHRQRQQQPPLPARPRSRPLCPGHHPAAEEEEHM
HCRYDTDLEHFIRAERERLMLQDKFLDDDERYLAAAPAPRSPGRRYPAGN
YHRPPRSKSLLEMQPPTILYDEDTCSDTTEIDLEDFNIDLEKYWEQLDKP
PSPINMDMRRNMHSSLKVKNVNVRCYNNGQPIDLHDREHERLMIKKSLLE
GMPSPPQLDSSESSTNAGGYPFFDTAPAVAPAPAFHHHPAYGQPQGYGHK
VYPTVDTLPSYQYNNFYPEHSHPTVGSVLTQQPTAGIHHPSAGGHSALSL
INNIFSIYKPNKYSPENCQMNYESKPEPCKKMNVPSTHRPLGAAAHPYPA
HDYMHSSMKRPLLVSADQPHFKIIPEKTGLKISPLLSYEDYGGGGGGEKA
HHRLTSTARPLMLPH*
BS31534.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:52:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43729-PJ | 1970 | CG43729-PJ | 1187..1951 | 1..765 | 4169 | 100 | Plus |
| CG43729-PI | 1951 | CG43729-PI | 1187..1951 | 1..765 | 4169 | 100 | Plus |
