BS31548.complete Sequence
2030 bp assembled on 2012-09-28
GenBank Submission: KX804775
> BS31548.complete
GAAGTTATCAGTCGACATGGACAAGAAAGAAGTTCAACATCACCGCAGTC
AACAGGCGATGACAAAATCTCTATACGCCATTGGGATGGGTCTTCTGGGA
AAGTCGGCGACCAACATGGATTGTGCTAATACGAATTTAGAATCGGCAGG
GAAGAGCTCCTCAACGAATTATAACAGAAATCGGTTCTACAACGAAAGGT
TCGTTCCGATGGCATCCGGAACTATGCCTTCCGTTTCGGGCACTAACCAT
CATTCTAGGCATCAACAGCTCCTTCTCCAACAAGCTCCCAAGTGCACTGC
CGATCTCAACGAGAAATTAGTAAAAATCAATCGGCAAAACGCCAATAAGG
AGCTATCCACCATTCAGGCAAAGGATATGCAATCCGTTGATAAAAACGAA
GAGGCCCTAAAAGAATTGCAGGAGAGCATTCCGGAAATCAACAAAATCTT
CGATGTGCACTGTCGCATCGGCAGTGGAACCTTCAGCACAGTTCTCTTGG
GAACCCTGCAGCGGGAAAGGGGTCTCGTGGAAACCCAAAGGAGGAGATTC
GCCATCAAACATCATAATCCCACAAATCATCCGGAGAGGATTCTTAGAGA
GTTGGAGTGCATGTATCGCATTGGTGGAGTGGAAAATGTAATCGGAATTA
ATTGCTGCATTAGATATAACGACAACGTGGCCTTTATCATGCCCTATATG
ACCCACGATCGCTTTCACGACATTTACAGAAGCCTGAATTTCCCAGAGAT
ACGCGACTATCTGAGGAACTTGCTCATTGCGCTGCGACACGTTCACAAGT
TCAATGTGATTCATCGGGACGTCAAGCCAAGTAACATTCTTTATAACCGC
AGGACCGGAAAGTTTTTACTCTGCGATTTCGGATTGGCTCAAAGGATAGC
CGATGATGGTAGTGTAGTGCAGTCGAGTGATCTCAGCTCCCGGGAAGTAT
TCTCCATTCTGAGGGACCTGGAGAATGGTAGAAGTGTGACGTTGACGGAT
GGCAATTCAGCCCAAGCCGAGGCTGAGGATTATATGGCCCGTCGAAGGAT
GCGGGCTCTAGGTGGCGGTGGGAGCGTGGAACGTGCTGTGACTGGACCTC
CGAGTATACAGAAACTACGTGAGCAAGCGGGTGGACATTTGACCAAAAAG
GATGTGGCCAACCAGAGGGCTGACACCATGAGGCTGCTGAACCGCCTGCG
ACTCGTGAGCCCAAATGCGGATCCCAACAACTACGTGGTCTCCACGAACA
CCTCGAAGAAGGAGATGCACGCTTCAAGGGCTGGAACCCCAGGATACAGA
CCCCCGGAGGTTTTGCTCCGATATCCCAAACAATCCACTGCGGTGGACGT
GTGGGCGGCTGGCGTTATAATGCTCTCTTTGCTCTCTGGTCTTCATCCAT
TTTTCAAGGCCCCCCACGACTGCGGCGCCCTGGCTGAAATAATCAACCTA
TTTGGCGATATGCCAGTGCGGAAGACTGCCTTTCTGCTGGATAGGCTGAT
TTTGCTGGCGCAGAAGGTGAACACCTTGGATTTACGGAGGGTGTGCATGC
GATTTCGCCATGCGGACTTCTTTCTGGCCCCCGAAATACAACGTAAATAT
CAAAGGCCCGATGGCACCACCGAAATGTGCCGCAGCTGTGAGCAGCCCAC
GTTTAATTGCCTGTGCAGCAACAGTGGGCATAATTTGGAAAGGTACGATG
GGCTGGATATATTTCCCGCAGTGGCCTACGACTTGTTGTCCCGTCTGCTG
GAAGTTAATCCCCAAAAGCGTATCACCGCCGAGGAGGCCCTAAAGCATCC
GTTCTTCAGCGATCAGCATCGCATTACGCCGGGAATACCGCTGCACCAGC
AGCAGCTTATAATGCACCAGCAGCAGCATATAATGCAGCATCAGCAACAC
CTCCAGAGATCCAGAGAGACACTTCCTTCGTCGGCGGCGCGAACTCTAAA
GGCATTCGTATGCTATCCCATGGAAATTACTTCTACTGCGTCACAGGCAG
CGGGTAACATCTGAAAGCTTTCTAGACCAT
BS31548.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:24:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5790-RB | 1998 | CG5790-PB | 1..1998 | 17..2014 | 9990 | 100 | Plus |
| CG5790-RA | 1998 | CG5790-PA | 1..1998 | 17..2014 | 9990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:24:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5790-RB | 2508 | CG5790-RB | 310..2307 | 17..2014 | 9990 | 100 | Plus |
| CG5790-RA | 2422 | CG5790-RA | 310..2307 | 17..2014 | 9990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:23:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18295149..18297146 | 17..2014 | 9990 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:24:00 has no hits.
BS31548.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-28 18:20:35 Download gff for
BS31548.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5790-RA | 246..2242 | 17..2013 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:23 Download gff for
BS31548.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5790-RA | 310..2306 | 17..2013 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:03:18 Download gff for
BS31548.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5790-RA | 310..2306 | 17..2013 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:03:18 Download gff for
BS31548.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18295149..18297145 | 17..2013 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:23 Download gff for
BS31548.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18295149..18297145 | 17..2013 | 100 | | Plus |
BS31548.pep Sequence
Translation from 16 to 2013
> BS31548.pep
MDKKEVQHHRSQQAMTKSLYAIGMGLLGKSATNMDCANTNLESAGKSSST
NYNRNRFYNERFVPMASGTMPSVSGTNHHSRHQQLLLQQAPKCTADLNEK
LVKINRQNANKELSTIQAKDMQSVDKNEEALKELQESIPEINKIFDVHCR
IGSGTFSTVLLGTLQRERGLVETQRRRFAIKHHNPTNHPERILRELECMY
RIGGVENVIGINCCIRYNDNVAFIMPYMTHDRFHDIYRSLNFPEIRDYLR
NLLIALRHVHKFNVIHRDVKPSNILYNRRTGKFLLCDFGLAQRIADDGSV
VQSSDLSSREVFSILRDLENGRSVTLTDGNSAQAEAEDYMARRRMRALGG
GGSVERAVTGPPSIQKLREQAGGHLTKKDVANQRADTMRLLNRLRLVSPN
ADPNNYVVSTNTSKKEMHASRAGTPGYRPPEVLLRYPKQSTAVDVWAAGV
IMLSLLSGLHPFFKAPHDCGALAEIINLFGDMPVRKTAFLLDRLILLAQK
VNTLDLRRVCMRFRHADFFLAPEIQRKYQRPDGTTEMCRSCEQPTFNCLC
SNSGHNLERYDGLDIFPAVAYDLLSRLLEVNPQKRITAEEALKHPFFSDQ
HRITPGIPLHQQQLIMHQQQHIMQHQQHLQRSRETLPSSAARTLKAFVCY
PMEITSTASQAAGNI*
BS31548.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:52:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5790-PB | 665 | CG5790-PB | 1..665 | 1..665 | 3465 | 100 | Plus |
| CG5790-PA | 665 | CG5790-PA | 1..665 | 1..665 | 3465 | 100 | Plus |
| l(1)G0148-PA | 700 | CG32742-PA | 104..276 | 122..294 | 631 | 64.7 | Plus |
| l(1)G0148-PA | 700 | CG32742-PA | 461..683 | 414..626 | 619 | 53.8 | Plus |
| l(1)G0148-PB | 699 | CG32742-PB | 460..682 | 414..626 | 619 | 53.8 | Plus |
| l(1)G0148-PB | 699 | CG32742-PB | 110..275 | 129..294 | 616 | 65.7 | Plus |
| Pdk1-PF | 755 | CG1210-PF | 51..449 | 47..483 | 196 | 23.6 | Plus |
