BS31565.complete Sequence
1919 bp assembled on 2012-09-28
GenBank Submission: KX806131
> BS31565.complete
GAAGTTATCAGTCGACATGTCTATCTCAGTGAAGCGGAAAACGGTGATTT
CACCGCAGGAACTCCTGAAGACACTCGAGCTGTCCGGCGAAGAGGACCTC
GATCTGCAGATCAAGAACTGGGTGATGTGGGACCGCAACGAGGCGACGCT
CCAGCAGGTGACTGAGGCAGTCAGGGATCAGGATTGGAAGGCGTTGCGGG
TGAGACTGTGCCATAGGATCACCTATTTGACAACTGGCTTGAGGGGAGTG
ATGCGCGCAGGCTTCGACTCTTTGAACGATGTGGTGATCATCGAAGTGGC
CCAGGGCATCTGCGCCTACCTCGTCGATGCCTATCCAAGCATCCAGAAGA
GGCAAACACAGGGCGTGGTCGTTGGCTACGATGGCAGGTACAATAGCAAG
CGGTTTGCCCAACTCATCGCCACCGTGTTCCTGAACAACGACTTCAAGGT
GTTCCTCTTCACTCGGATGATTCCGACACCCTTTATACCCTTCACCGTCG
TCACGCTCCAGTGCCTGGCGGGGATCGTGGTCACTGCCTCCCACAACGTT
AAGGAGGACAATGGCATCAAGGTATATTGGTCGAATGGGGCTCAGGCGAT
GGCACCGCACGATCAGCGGATTCATGACTATATGATGAATAACCTAGAAC
CAAAGCCTTCGTCCTGGGAAACTTCACTGGTACTTGACCATCCCTTGGTG
GAGGATCCCTATCGTCAGATATACCCACTCTTTTACGAGGCTCTCAAGAC
GCTTATTCCCCCAATTTACCTGGAAACTAATGAGTGCAGCCAGTTGAGGT
TCATCTATACAGCTCTTCACGGTGTGGGTTATCCCTTCATGAGGGAGGCC
TTCTACCAGGCGCGACTCAAGCCGGTTATTCCCGTCGTGGAACAGAAAGA
GGCCGATCCAGAGTTTCCCACCCTCGTTAAACCAAATCCGGAAGAGGGCA
AGGAAGCGCTGAAGCTGGCCATAAAGAAGGCGGATGCGGAACACTGCACC
TTGGTTCTGGCCAATGATCCGGATGTGGATCGCTTGGCTGTGGCAGAGCT
GGATCCGCGTGGCCGCTGGAAGCTGTTCAATGGCAACGAACTGGGTGCCC
TGCTCGGCTGGTGGGCACTGGAGAACTACAAGACTAGGACACCCAAGCCA
GCAGTGACCAATTGCATAATGATAGCCACACTGGTCAGCTCACGCATCCT
GGCGGCAATGGCGAGAGTTGAGGGCTTCATCTTTGTGGAGGGCATGCCCA
GTTTCCCCTGGATGGCACATCGCGCCTTGGAGCTGGAAAAGTCTGGAAGA
ACAGTACTATTTGCATTTGAGGAGTGCTTTGGCTATATGTTCGGAATGAG
CCTGCCGGATAAGGATGGCATTGGAGCTGCCATGCAGTTGGCCAGCATGG
CCTGTTATCTGCGCAGCACTAGAAATGTGACGCTGATCGAGAAGCTAAGG
GAGATCTACGATACGTATGGCTACCATTCGTCGATCTCGTCGGTTTATAT
GGCCGATAGTCCAGAGACAATCACTAGCGTCTTCGATCATTTGCGCAACT
TTACGGACGAAGAGGGATATCCGAAGTTCATTCTGGATGAAGAATTCGAA
GTGGTTCATATCCGGGATTTGACCATCGGACTGGACACTTCCTTCAGCGA
TGGAAAGGCTCGTATGCCGGTCACTCCAGATGCCCAGCTAATTACGTTTA
CCTTCACCAATGGCTATGTGGTTACCCTGCGATCGGCACCCAACGATATT
AAGATCAAACTTAATGCGGAGATCTGTGGCTTGCCGGAGGAAAAGCAGTG
GGAGGAGCTACACGATAAACTGAACAGGATGACCAATGCCGTGGTGGAGG
AGTTTCTTCAACCAGAGGAGAATGGTCTTACGGATGCCTCAACAATTCAA
TAAAAGCTTTCTAGACCAT
BS31565.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:26:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10202-RA | 1887 | CG10202-PA | 1..1887 | 17..1903 | 9420 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:26:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10202-RA | 2059 | CG10202-RA | 73..1959 | 17..1903 | 9420 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:26:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14817957..14818917 | 1903..943 | 4805 | 100 | Minus |
| 2R | 25286936 | 2R | 14818988..14819915 | 944..17 | 4625 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:26:18 has no hits.
BS31565.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-28 18:20:49 Download gff for
BS31565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10202-RA | 73..1957 | 17..1901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:59 Download gff for
BS31565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10202-RA | 73..1957 | 17..1901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:04:07 Download gff for
BS31565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10202-RA | 73..1957 | 17..1901 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:04:07 Download gff for
BS31565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14817959..14818915 | 945..1901 | 100 | <- | Minus |
| 2R | 14818988..14819915 | 17..944 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:59 Download gff for
BS31565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10705464..10706420 | 945..1901 | 100 | <- | Minus |
| arm_2R | 10706493..10707420 | 17..944 | 99 | | Minus |
BS31565.pep Sequence
Translation from 16 to 1902
> BS31565.pep
MSISVKRKTVISPQELLKTLELSGEEDLDLQIKNWVMWDRNEATLQQVTE
AVRDQDWKALRVRLCHRITYLTTGLRGVMRAGFDSLNDVVIIEVAQGICA
YLVDAYPSIQKRQTQGVVVGYDGRYNSKRFAQLIATVFLNNDFKVFLFTR
MIPTPFIPFTVVTLQCLAGIVVTASHNVKEDNGIKVYWSNGAQAMAPHDQ
RIHDYMMNNLEPKPSSWETSLVLDHPLVEDPYRQIYPLFYEALKTLIPPI
YLETNECSQLRFIYTALHGVGYPFMREAFYQARLKPVIPVVEQKEADPEF
PTLVKPNPEEGKEALKLAIKKADAEHCTLVLANDPDVDRLAVAELDPRGR
WKLFNGNELGALLGWWALENYKTRTPKPAVTNCIMIATLVSSRILAAMAR
VEGFIFVEGMPSFPWMAHRALELEKSGRTVLFAFEECFGYMFGMSLPDKD
GIGAAMQLASMACYLRSTRNVTLIEKLREIYDTYGYHSSISSVYMADSPE
TITSVFDHLRNFTDEEGYPKFILDEEFEVVHIRDLTIGLDTSFSDGKARM
PVTPDAQLITFTFTNGYVVTLRSAPNDIKIKLNAEICGLPEEKQWEELHD
KLNRMTNAVVEEFLQPEENGLTDASTIQ*
BS31565.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:53:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10202-PA | 628 | CG10202-PA | 1..628 | 1..628 | 3284 | 100 | Plus |
| Pmm45A-PA | 623 | CG8073-PA | 12..618 | 17..621 | 1723 | 52.7 | Plus |
