BS31570.complete Sequence
680 bp assembled on 2012-08-22
GenBank Submission: KX802821
> BS31570.complete
GAAGTTATCAGTCGACATGGATATTGCCTTGCGTGGCACAAACAGAGCAT
CGTCAACATCAACGACTGGAACTGGTCTGCATCATGCTGTGTCATTGGGC
AACATTGAGGTCTCCACCAAGACCACCTACTCCAGCCACATGGATCGCAG
CTACGACTCCGAGGATGAACACACTGGTCGCCGAAGACTTCGCCATACGC
TGTCCACCGAGTTGCATCCTCACACTTCTGTTTACTCACGCGGAGATATT
CGGGAACAGTACTGCCTCACAGATCGCCAGTTGCACAGCATAGAGCAGCG
TCCTAGGCGAGAACGATTTTTTGGCTGCCTTTCGCGACGCGGTCAAACGC
AATCGGGCAGTTTTTTGGGCGGCTGTGTGGGTCGGCGGGTGCCCTCCGAT
GAGAATTTGGCCGCCTATGCTCCATTTGAAAAATATCCACGCTACCAGAA
CAGCTATACGGACACACACGAATTGGAAAGTTCCTATTTTCGCCGTCAAC
CGGCCTCGATTCTGAGTACTGGTAAATCGGGTGAAGCGGATCTGGGTGGA
CGCTACACCTGGATTGGCCAACAGCAGGTGACCAACAACAATCCCGACTA
CCAATCGGACCACAGGTATGGACCGCCTGGCAAGGCGATCGAAAGTCGAT
ACAAAAACAGATAAAAGCTTTCTAGACCAT
BS31570.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:33:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43707-RG | 5931 | CG43707-PG | 1..599 | 17..615 | 2995 | 100 | Plus |
| CG43707-RF | 5946 | CG43707-PF | 1..599 | 17..615 | 2995 | 100 | Plus |
| CG43707-RE | 6066 | CG43707-PE | 1..599 | 17..615 | 2995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:33:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43707-RD | 8194 | CG43707-RD | 643..1290 | 17..664 | 3240 | 100 | Plus |
| CG43707-RG | 7617 | CG43707-RG | 643..1241 | 17..615 | 2995 | 100 | Plus |
| CG43707-RF | 7922 | CG43707-RF | 643..1241 | 17..615 | 2995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:33:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3758980..3759203 | 441..664 | 1120 | 100 | Plus |
| 2L | 23513712 | 2L | 3758735..3758919 | 257..441 | 925 | 100 | Plus |
| 2L | 23513712 | 2L | 3758537..3758676 | 120..259 | 700 | 100 | Plus |
| 2L | 23513712 | 2L | 3757898..3757957 | 17..76 | 300 | 100 | Plus |
| 2L | 23513712 | 2L | 3758042..3758089 | 74..121 | 240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:33:49 has no hits.
BS31570.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:26:48 Download gff for
BS31570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31959-RB | 268..913 | 17..662 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:49 Download gff for
BS31570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43707-RD | 643..1288 | 17..662 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:06:55 Download gff for
BS31570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43707-RD | 643..1288 | 17..662 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:06:55 Download gff for
BS31570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3758981..3759201 | 442..662 | 100 | | Plus |
| 2L | 3758738..3758919 | 260..441 | 100 | -> | Plus |
| 2L | 3757898..3757955 | 17..74 | 100 | -> | Plus |
| 2L | 3758043..3758089 | 75..121 | 100 | -> | Plus |
| 2L | 3758539..3758676 | 122..259 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:49 Download gff for
BS31570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3758738..3758919 | 260..441 | 100 | -> | Plus |
| arm_2L | 3758981..3759201 | 442..662 | 100 | | Plus |
| arm_2L | 3757898..3757955 | 17..74 | 100 | -> | Plus |
| arm_2L | 3758043..3758089 | 75..121 | 100 | -> | Plus |
| arm_2L | 3758539..3758676 | 122..259 | 100 | -> | Plus |
BS31570.pep Sequence
Translation from 16 to 663
> BS31570.pep
MDIALRGTNRASSTSTTGTGLHHAVSLGNIEVSTKTTYSSHMDRSYDSED
EHTGRRRLRHTLSTELHPHTSVYSRGDIREQYCLTDRQLHSIEQRPRRER
FFGCLSRRGQTQSGSFLGGCVGRRVPSDENLAAYAPFEKYPRYQNSYTDT
HELESSYFRRQPASILSTGKSGEADLGGRYTWIGQQQVTNNNPDYQSDHR
YGPPGKAIESRYKNR*
BS31570.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:25:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43707-PG | 1976 | CG43707-PG | 1..199 | 1..199 | 1061 | 100 | Plus |
| CG43707-PF | 1981 | CG43707-PF | 1..199 | 1..199 | 1061 | 100 | Plus |
| CG43707-PI | 2007 | CG43707-PI | 1..199 | 1..199 | 1061 | 100 | Plus |
| CG43707-PE | 2021 | CG43707-PE | 1..199 | 1..199 | 1061 | 100 | Plus |
