BS31579.complete Sequence
1406 bp assembled on 2012-08-22
GenBank Submission: KX801948
> BS31579.complete
GAAGTTATCAGTCGACATGAGCAGCAAGGTGAACTTCGTCTTCGACAGCA
ATCCTTTGGGGCTCTATCAAGCCGGTCAGCTTATCTCCGGCACGGCGGAA
CTGATTACGGAGCGCCCCAAGACGATTCGATCGATCTTTATAACCATAAA
TGGATACGGCGAGACGCGTTGGCAGGAAAGCGAGGAGCGAGTGGGAGAGG
ATGGGAAGACGACCAAGTCCCTGGTGACCCACACCACCACCGAGGTCTAC
TACAGCACTGACCAGCCGGTTTACGGCCAGGCCGGTGGCTCGCAGCTGGA
GTTGCCCACCGGCAAGTACGTCTTTCCCTTCCGGGCTACCATTCCGCCCA
ATGCACCCACCTCATTCAATGGTGCTCATGGTCAGATTAAGCACGAGGTT
ACCCTAACCATCGATCGCGCGGTTCGCTACAACAACACATTTAAGCAGTG
CTTCACGGTGATCCTGCCACATGATCTTAATAGGCGGCTCGAGTATAAGG
AACCCCTCCAACGCTTGGAGTCGAAGAGCTTCTGGTGGGGCTCCATTTTC
GGTGCCCACAAGCCGATGATCATGGACGTGAGCACCTCTTATTCTGCCTA
CGTCCCCGGCCAGAAGATTCATTTCCATCTGGTGTTGGACAACCAGTCGG
ATGTCCAATGTATGGACGTGAAGGTGCGTCTGATCAAGAACGTCTCATAT
AGAGCCAACTCATCGGGCGCAAAGGAGCAGTTGAAGGTAACCGAATCTCG
GGTGGCGGACAAGCACTGCGGTGAGGTGCTGAAGCACAACAAGGCCAAGT
TCGATGAGTTCCTCACGGTGCCGCCAACTACTCCATCCACGCAAAGCGAA
AAGGATCCCATTCGAGTTAGCTACACATTGCGATTCATCGCCAAGACCTT
CAAGCTGCACGGTGGTGGCGACTTGGTCATGGACTTTCCAATAACCATTG
GCACAGTGCCGCTGCTGGGAAGTGCTGATGACAAGGGGCCCGGGGCGGAG
AAGTCCCAGCCCAGTGGTGCCTCTCATCCAGGCTCACCCAACTTTCAGGA
GGACGTCAGCGATGAGCAATTCGAGTCCAACACCTTTAAGCCAAGATATC
CCGTCTATCCATTTGATGGGAAGCCTGGAACCAATGGCTCAAACGGGGCA
GCTAATTTTCCCAGTCTTTATCCCAAGGCAGAGGAGGCGCATCCTGCTAC
GCCTGTGAAATTCACACCAAATCCTGTGTCGCCAGCCGCACAAAAATCGC
CACCATATACGACCAACACACCTGTTGCTTCTCCGCCAGGCGGTAATTTT
GAGGTGCTTGGATTCAGTATACCACCAGACTATAAACCCACGCCTAGTGC
TCCAGCCGCCTCTTCCACTGGCGGCATTGGGTGGAAATAGAAGCTTTCTA
GACCAT
BS31579.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:35:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14696-RA | 1374 | CG14696-PA | 1..1374 | 17..1390 | 6870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:35:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14696-RA | 1642 | CG14696-RA | 168..1541 | 17..1390 | 6870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:35:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10882955..10883489 | 1032..498 | 2675 | 100 | Minus |
| 3R | 32079331 | 3R | 10883546..10883914 | 500..132 | 1845 | 100 | Minus |
| 3R | 32079331 | 3R | 10882534..10882894 | 1390..1030 | 1805 | 100 | Minus |
| 3R | 32079331 | 3R | 10884720..10884834 | 131..17 | 575 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:35:32 has no hits.
BS31579.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:26:55 Download gff for
BS31579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14696-RA | 168..1535 | 17..1384 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:16 Download gff for
BS31579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14696-RA | 168..1535 | 17..1384 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:07:27 Download gff for
BS31579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14696-RA | 168..1535 | 17..1384 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:07:27 Download gff for
BS31579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10884720..10884834 | 17..131 | 100 | | Minus |
| 3R | 10883547..10883914 | 132..499 | 100 | <- | Minus |
| 3R | 10882540..10882892 | 1032..1384 | 100 | <- | Minus |
| 3R | 10882956..10883487 | 500..1031 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:16 Download gff for
BS31579.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6708262..6708614 | 1032..1384 | 100 | <- | Minus |
| arm_3R | 6708678..6709209 | 500..1031 | 100 | <- | Minus |
| arm_3R | 6709269..6709636 | 132..499 | 100 | <- | Minus |
| arm_3R | 6710442..6710556 | 17..131 | 100 | | Minus |
BS31579.pep Sequence
Translation from 16 to 1389
> BS31579.pep
MSSKVNFVFDSNPLGLYQAGQLISGTAELITERPKTIRSIFITINGYGET
RWQESEERVGEDGKTTKSLVTHTTTEVYYSTDQPVYGQAGGSQLELPTGK
YVFPFRATIPPNAPTSFNGAHGQIKHEVTLTIDRAVRYNNTFKQCFTVIL
PHDLNRRLEYKEPLQRLESKSFWWGSIFGAHKPMIMDVSTSYSAYVPGQK
IHFHLVLDNQSDVQCMDVKVRLIKNVSYRANSSGAKEQLKVTESRVADKH
CGEVLKHNKAKFDEFLTVPPTTPSTQSEKDPIRVSYTLRFIAKTFKLHGG
GDLVMDFPITIGTVPLLGSADDKGPGAEKSQPSGASHPGSPNFQEDVSDE
QFESNTFKPRYPVYPFDGKPGTNGSNGAANFPSLYPKAEEAHPATPVKFT
PNPVSPAAQKSPPYTTNTPVASPPGGNFEVLGFSIPPDYKPTPSAPAASS
TGGIGWK*
BS31579.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:25:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14696-PA | 457 | CG14696-PA | 1..457 | 1..457 | 2434 | 100 | Plus |
| CG2993-PA | 511 | CG2993-PA | 9..306 | 9..317 | 475 | 33.5 | Plus |
| CG2993-PB | 524 | CG2993-PB | 9..306 | 9..317 | 475 | 33.5 | Plus |
| CG2993-PC | 545 | CG2993-PC | 9..306 | 9..317 | 475 | 33.5 | Plus |
| CG18748-PC | 409 | CG18748-PC | 8..388 | 8..364 | 371 | 28.2 | Plus |
